Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14006 LG3 41859907 41862685 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 41859955 missense_variant p.Lys468Asn
A/T 41859961 missense_variant p.Ser466Arg
C/T 41859962 missense_variant p.Ser466Asn
G/A 41859992 missense_variant p.Thr456Met
T/A 41860083 stop_gained p.Arg426*
A/T 41860084 missense_variant p.Asp425Glu
A/C,T 41860128 missense_variant p.Cys411Gly
T/A 41860195 missense_variant p.Glu388Asp
T/C 41860209 missense_variant p.Arg384Gly
G/T 41860214 splice_acceptor_variant&intron_variant
T/C 41860237 upstream_gene_variant
T/A 41860249 upstream_gene_variant
C/G 41860284 upstream_gene_variant
G/A 41860301 upstream_gene_variant
T/C 41860422 missense_variant p.Tyr345Cys
C/G 41860492 upstream_gene_variant
A/G 41860499 upstream_gene_variant
G/A 41860510 upstream_gene_variant
A/T 41860549 splice_region_variant&intron_variant
C/T 41860552 splice_region_variant&intron_variant
C/T 41860554 splice_donor_variant&intron_variant
A/T 41860593 missense_variant p.Ser321Thr
C/T 41860598 missense_variant p.Ser319Asn
G/A 41860686 missense_variant p.Pro290Ser
C/T 41860731 missense_variant p.Glu275Lys
T/A 41860773 missense_variant p.Ile261Phe
G/A 41860840 upstream_gene_variant
A/G 41860906 upstream_gene_variant
A/G 41860994 upstream_gene_variant
A/T 41861005 upstream_gene_variant
G/T 41861025 upstream_gene_variant
T/G 41861040 upstream_gene_variant
T/A 41861042 upstream_gene_variant
A/G 41861064 upstream_gene_variant
T/C 41861214 upstream_gene_variant
C/T 41861235 upstream_gene_variant
C/T 41861253 upstream_gene_variant
A/T 41861258 upstream_gene_variant
C/A 41861267 upstream_gene_variant
A/G 41861270 upstream_gene_variant
T/C 41861288 upstream_gene_variant
A/G 41861290 upstream_gene_variant
G/A 41861315 upstream_gene_variant
G/T 41861317 upstream_gene_variant
T/A 41861338 upstream_gene_variant
C/T 41861350 upstream_gene_variant
T/A 41861378 upstream_gene_variant
C/G 41861379 upstream_gene_variant
T/G 41861401 upstream_gene_variant
A/T 41861403 upstream_gene_variant
C/G,A 41861481 upstream_gene_variant
T/C 41861529 upstream_gene_variant
G/A 41861541 upstream_gene_variant
G/A 41861548 upstream_gene_variant
T/A 41861601 upstream_gene_variant
T/G 41861604 upstream_gene_variant
C/G 41861609 upstream_gene_variant
T/A 41861627 upstream_gene_variant
C/A 41861646 upstream_gene_variant
A/T 41861652 upstream_gene_variant
C/T 41861672 upstream_gene_variant
G/C 41861679 upstream_gene_variant
G/C 41861753 upstream_gene_variant
T/A 41861760 upstream_gene_variant
G/C,* 41861767 upstream_gene_variant
C/G 41861769 upstream_gene_variant
C/A 41861784 upstream_gene_variant
A/G 41861812 upstream_gene_variant
T/A 41861813 upstream_gene_variant
G/C 41861848 upstream_gene_variant
T/A 41861867 upstream_gene_variant
C/A,G 41861870 upstream_gene_variant
T/G 41861871 upstream_gene_variant
G/A 41861887 upstream_gene_variant
C/T 41861895 upstream_gene_variant
A/G 41861904 upstream_gene_variant
C/G 41861908 upstream_gene_variant
A/C 41861978 missense_variant p.His236Gln
A/G 41862014 synonymous_variant p.Val224Val
C/T 41862058 missense_variant p.Ala210Thr
T/C 41862066 missense_variant p.Asp207Gly
C/T 41862068 synonymous_variant p.Glu206Glu
C/A 41862070 stop_gained p.Glu206*
A/G 41862148 synonymous_variant p.Leu180Leu
C/T 41862157 missense_variant p.Gly177Ser
T/C 41862182 synonymous_variant p.Glu168Glu
A/G,T 41862268 missense_variant p.Phe140Leu
C/T 41862290 missense_variant p.Met132Ile
G/T 41862308 missense_variant p.Asp126Glu
C/T 41862310 missense_variant p.Asp126Asn
G/A 41862422 synonymous_variant p.Tyr88Tyr
G/A 41862440 synonymous_variant p.Gly82Gly
T/A 41862469 missense_variant p.Ser73Cys
A/G 41862470 synonymous_variant p.Asn72Asn
T/G 41862502 missense_variant p.Asn62His
T/A 41862560 synonymous_variant p.Ala42Ala
C/G 41862567 missense_variant p.Ser40Thr
C/T 41862590 synonymous_variant p.Val32Val
T/C 41862649 missense_variant p.Ser13Gly
A/C 41862659 missense_variant p.Phe9Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14006.1
MRSICFTFFLLLSFRSFITKAEEEANLGSNCVNTTQQTLSSAYQTNLDRILTWMPLDAATSNGYNHTTIGTNSSVYGLYDCGGDAVGYFCQFCVSTAANEAPQLCPNRVSAVVWNDYCVIRYSNEDFFGKAMTSQIWHSFGKRNISNITEIQKGENFVTSLIRKATNETNQLYYKEGFNLSATESRYSVVQCTRDLTNEACRQCLEDILAEVPKCCEQKVTWTVWSGSCLIRYDDHMFYLLPNQPPSAPEPNAQDVEKRKKFDWKIRSSLISGIAKGILYLHEDSQLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEVGQNQANTKRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIISGRKNGGFYLSDGQNLLVYALRTWYEGKCLELMDSMLEKSFIGSEVERCIQIGLLCVQEDARDRPTMSDVVVMLASDTVAIPKPRHPAFSVGRTATEEVPTSRSSKKLSISDITTSITLPR*


CDS Sequence:
>Vu_14006.1
ATGAGATCAATATGCTTTACTTTCTTTTTATTGCTGAGTTTCAGATCATTCATCACAAAGGCCGAAGAAGAAGCAAACCTGGGAAGTAACTGTGTGAACACTACCCAGCAGACTCTAAGCAGTGCATACCAAACCAACCTTGATAGAATCCTAACCTGGATGCCCTTGGATGCAGCCACAAGCAATGGTTATAACCACACCACCATAGGCACCAATAGCTCTGTGTATGGCCTCTATGATTGTGGCGGTGACGCGGTTGGATACTTTTGTCAATTTTGTGTTTCCACTGCTGCAAACGAAGCCCCTCAGCTCTGCCCCAATAGGGTATCTGCTGTGGTGTGGAATGATTACTGCGTTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTATGACATCCCAAATATGGCATAGTTTTGGAAAAAGAAACATATCCAATATAACAGAGATTCAGAAAGGTGAGAATTTTGTGACAAGTTTGATCAGAAAAGCAACTAATGAAACCAACCAGTTGTACTATAAGGAAGGCTTCAATTTGAGTGCCACTGAGAGTAGGTATAGCGTGGTGCAATGCACTAGAGATCTCACAAATGAAGCGTGCAGACAGTGTTTGGAGGACATACTGGCTGAAGTTCCCAAATGTTGTGAACAGAAAGTAACATGGACGGTTTGGTCTGGAAGTTGTTTGATAAGGTATGATGATCATATGTTCTACCTTCTTCCCAACCAACCACCTTCAGCTCCCGAGCCCAATGCACAAGATGTTGAGAAAAGAAAAAAATTCGATTGGAAAATAAGATCAAGCCTTATCAGTGGAATAGCGAAAGGTATTTTATACCTTCATGAGGACTCTCAACTCAGAGTAATCCATAGAGATCTCAAAGCAAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTAGGTCAGAACCAGGCAAATACAAAACGAGTAATGGGAACTTATGGATACATGGCTCCTGAATATGCTATGGAGGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTCTGGGAGAAAGAATGGTGGATTCTACCTGTCAGATGGTCAAAATCTTCTTGTATATGCTTTGAGAACATGGTATGAAGGAAAATGTTTGGAATTGATGGATTCAATGCTGGAAAAATCCTTCATAGGAAGTGAAGTAGAAAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAACCATGTCGGATGTTGTGGTAATGCTAGCAAGTGACACAGTAGCCATTCCAAAACCCAGGCACCCAGCATTTTCAGTTGGAAGAACGGCCACAGAGGAAGTCCCTACATCAAGAAGTTCCAAGAAACTTTCCATTAGTGATATAACAACCTCTATTACTTTACCAAGATAA


Promoter Sequence:
>Vu_14006::LG3:41862685-41864685(-)
TAACACCAGCATGTTATGTTACTCTTTTTTTTAAACCCTAACATAACATAACACCTGTATTTTTAAACTCTTTTTTTAAATTGTATATATTTAAATTTTCCCTCCTCAATTTTAACTCTTTTTTTTGAAATTGTATATATTTAAATTAAACTCTTTTTTTTTAATTTGTATATATTTAAATTGTATATATTTAAATATATATCTTTTGTATATATTTAAACAAAATTTGTTAAGATTTGTATACAATTTAAACTTTGTTTGAATTTGAGGAGGGAAAAATTGTTTAATTTTTAAAATTAAGACTAAATTGAGACAAAATGAAAATACAGGGATCAAATTGGAACATAATAAAAATACAGGGACCAAATTGAGACTAATGTAATGACACGTGGCCTGACAATGACATGTGACACTGTCAGTGTCATGTCACACTGCCATTGCCACGTGGCACACTATCAGTTTGACACATGGCATTTTTAAATTTTACTTTAAAAAAAATAAAAAATAAAAAATAAAAAATAAAAATAAAAATAATAAAAATATAATTCAAAAATTCAAAAAAACCACGAACTGACACGTGTCACCCCCTTTAACGGTGTTAGTATGAAACTAACGGTAAGGCCTAAATTGATTCAATTTTTCATAATAAGGGACCTAATCGAGAATATTTACAATACGAGGACCTACTTGAGACAATCCTACAGAAATAGGGATGTTCGAAAGGATTAAACCAATATAATGGCTACCAAAATGTTAAGAGAATTAAAGTAAAATTATATACAAATACAGTTACAACAATTTTATTTCTTTTATATATTGGAATAGATAACTTTCTGGATCAAACTAAATACAAATTTATTAGATTATAAAGGGTTAAAAAGTTATAAAAGATTGGATCAAAATTTATTAGATTCTACAATATTATAAAATTTATTAAAGATATCCAAATTTTAATCATTTATACGGATAATAAAAATAAGAGCAAATGGATGGAAGTGATCCTCTCATGTTGCCTCCAGCCCTATATATTTACTTTTAACTTTTAGATATGTGTAAATCCGTAAAAGGAATGACTACAAAAATATCTAGTTATCCATACATAAGTAGTTATCCATTCATCACAATGACGAATTGGTATCCAAAAATATTTATTATAAGCAAATATAGTGAATAATAAGTATTTTAATATCAGATTAAACAAATCAAATACAGATGTTATATTATTAGTATCTTTGCATATTCATTACTTAATAAAGTTAAAGTTAAAATTTATATTATATTATATTAAATTTAATTTAATTAAAATAAAAAATTAAGTTAAATTTTATTAGGTTAAATTTAATTAAAGTAAAAATTTAATTTATATTATATTTTATAATTTTTTAAATTTTATATATATTTTATTTTAAAAATCTATAAAATATAATATAATTTTTTAAAACTCAAGGTTATTTTTTTAATACATTCTTAATTTGGTCATTTAAAGGATCAAATATAAAAAGGCATACCGGTGTAAGGAGAAAATTTAAAATATAATACATGTATAGGAAGACCAAATTAAAAATGAATAACATTTTACATGTACAAAACGGATTTAATTAATTTAATACAAAAAAAAAAGAAGAATATTCTCTTTGTTTTTTGTTTAGGTGAAAACGATACTTTTAACTGTAAGCAAAGTTGACTACGTACCTGATGTCAGAAGGGCTGCTAGATACAAGCTCTCAGTGAGCTAGTCATGACTTTACCATGTCTTTCCCTCAACTATTGGCTACGTTAGTTGACATTTTATACATGTTGAATTTCAAATTTGAACTTTATCTTGTTTTACATTCACTGTTAAAGGATAAAAAAATGGTACTTTAGTAATCAAAATTGACAATTAGAATTAATAGGTCATTAAACTCATGGCTGTGAAATGCATTACTAGCTATGTGTTTCAATCATTGCAGCAAATAACACAATTAAGCAAGTACTTCATCACAGGAATACAAAGAAAC


Gene Sequence:
>Vu_14006(-)
ATGAGATCAATATGCTTTACTTTCTTTTTATTGCTGAGTTTCAGATCATTCATCACAAAGGCCGAAGAAGAAGCAAACCTGGGAAGTAACTGTGTGAACACTACCCAGCAGACTCTAAGCAGTGCATACCAAACCAACCTTGATAGAATCCTAACCTGGATGCCCTTGGATGCAGCCACAAGCAATGGTTATAACCACACCACCATAGGCACCAATAGCTCTGTGTATGGCCTCTATGATTGTGGCGGTGACGCGGTTGGATACTTTTGTCAATTTTGTGTTTCCACTGCTGCAAACGAAGCCCCTCAGCTCTGCCCCAATAGGGTATCTGCTGTGGTGTGGAATGATTACTGCGTTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTATGACATCCCAAATATGGCATAGTTTTGGAAAAAGAAACATATCCAATATAACAGAGATTCAGAAAGGTGAGAATTTTGTGACAAGTTTGATCAGAAAAGCAACTAATGAAACCAACCAGTTGTACTATAAGGAAGGCTTCAATTTGAGTGCCACTGAGAGTAGGTATAGCGTGGTGCAATGCACTAGAGATCTCACAAATGAAGCGTGCAGACAGTGTTTGGAGGACATACTGGCTGAAGTTCCCAAATGTTGTGAACAGAAAGTAACATGGACGGTTTGGTCTGGAAGTTGTTTGATAAGGTATGATGATCATATGTTCTACCTTCTTCCCAACCAACCACCTTCAGCTCCCGAGCCCAATGCACAAGGTGAACCTGAATCCGTTTTTTTCATAAGCAAATATCAGTCATTAATATATTAGCTATTGTTAATGGATCTATTTCCTTCTCCCTCCCTTCCACTTTTATCACCAAATCAATCTTATATTTTCATTAATCTTTTATTTTGTCACAGATAAACTAGGCGGTAATAACAGATCAAAAATATTGATCATTACCTTCAGCGTGGTAGGGCCAATAATTATTTCATGTTTCAGCCTATACTGCTTCTGCCATAGGAGAAGACTGAGAAAAGGTAACTATCAAGGAATAACCACGGGTGGGGATAGGGAATCTCATTTCTGCAAGAACACATGGCTGAGATATGAACTCACAAAATTTTCTTTGTAGAAGGGCTTCCTCTACCTTCATCACATAAAATTCAATCAGAGGAAATGTGGAACCCAGACCTGCCTAGAATCCCATTAATAAGAATTCTACAGAGTACTGATAACTTTTCAGAAGCATCTAAACTAGGAGAAGGTGGATTTGGCCCCGTGTACAAGGTTGTAAAGATGAGGAGTTTCTGATATAGATTTCTTATTTTTTTACCATCTTTCTATGTACTCTTATTTATTGCAAACTTTATCAGGGAACTCTTCCTGATGGAAAGCAAATTGCAGTCAAAAGACTCTCCCAATTTTCTGGTCAAGGCTCGGAGGAGTTCAACAATGAAGTGATGTTTATAGCTAAATTGAGACATCGCAACCTTGTAAGACTTTTAGCATGTTGCTCGGAGGAAAATGAAAAGATACTTGTATATGAGTATTTGCCAAATAAAAGTCTCGACTTTCACCTATTTGGTATGTTTTCACATAACTCCAGCAGCAGTGTTGTATTTTCTGCAATTGTCTCCAGCAATCTCCAGTACAAAAATAGTATTTGTTCCCAAGTAAAATGGGAAACTATGGGAACGTAGTTGTCCTGGCTTGTATATAGTACTATTATATCATGCAATTAATAATAATCTCATCATTTATCTTTATGGAGAAAATGAAAAATTCTTCTAGTATTTTGTTTCCCCATTTCTATAGCCAAACCATAGAATATGGTGTATTTTCTATATATATTTTCTTCACTAACTGTTTTTTGTTCAAATCTCAATGCTGTTGTGTGGTCAGATGTTGAGAAAAGAAAAAAATTCGATTGGAAAATAAGATCAAGCCTTATCAGTGGAATAGCGAAAGGTATTTTATACCTTCATGAGGACTCTCAACTCAGAGTAATCCATAGAGATCTCAAAGCAAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTAGGTCAGAACCAGGCAAATACAAAACGAGTAATGGGAACTTAGTGAGTTCTATCTGCATATTTTAGTATTTCAATGAAATTCTTTCCTATATGTTCCTTGACTCGAGATAATGACAAAGCTTTATTGATTTCTATTAGTGGATACATGGCTCCTGAATATGCTATGGAGGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTCTGGGAGAAAGAATGGTGGATTCTACCTGTCAGATGGTCAAAATCTTCTTGTATATGTAAGTCTTCACTCTAGTGTGGTCGTGAAATTATTCAATGCTAAGATAACTAAGACTTAAGAATATTAAAAAAAAAAACACAAATACTTGTGTAGGCTTTGAGAACATGGTATGAAGGAAAATGTTTGGAATTGATGGATTCAATGCTGGAAAAATCCTTCATAGGAAGTGAAGTAGAAAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAACCATGTCGGATGTTGTGGTAATGCTAGCAAGTGACACAGTAGCCATTCCAAAACCCAGGCACCCAGCATTTTCAGTTGGAAGAACGGCCACAGAGGAAGTCCCTACATCAAGAAGTTCCAAGAAACTTTCCATTAGTGATATAACAACCTCTATTACTTTACCAAGATAA