Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14005 LG3 41853430 41857403 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 41853461 missense_variant p.Cys537Ser
A/T 41853489 intron_variant
A/G 41853500 intron_variant
C/G 41853506 intron_variant
A/G 41853512 intron_variant
G/T 41853590 intron_variant
T/A 41853632 intron_variant
C/T 41853638 intron_variant
T/A 41853762 intron_variant
G/T 41853772 intron_variant
T/A 41853878 stop_gained p.Lys507*
C/G 41853881 missense_variant p.Glu506Gln
C/A 41853896 stop_gained p.Gly501*
T/A 41853900 synonymous_variant p.Ser499Ser
G/T 41853937 missense_variant p.Thr487Lys
C/A 41853989 missense_variant p.Ala470Ser
T/A 41854028 missense_variant p.Arg457Trp
T/C 41854062 missense_variant p.Ile445Met
A/T 41854102 missense_variant p.Ile432Lys
T/A 41854162 intron_variant
A/G 41854211 missense_variant p.Tyr428His
G/T 41854236 synonymous_variant p.Thr419Thr
T/G 41854318 missense_variant p.Tyr392Ser
T/C 41854387 intron_variant
A/G 41854407 intron_variant
G/A 41854415 intron_variant
T/C 41854469 intron_variant
C/T 41854546 stop_retained_variant p.Ter365Ter
G/T 41854785 intron_variant
A/C 41854812 intron_variant
T/G 41854890 intron_variant
C/T 41854965 downstream_gene_variant
A/G 41855008 downstream_gene_variant
G/T 41855104 downstream_gene_variant
A/G 41855110 downstream_gene_variant
C/A 41855142 downstream_gene_variant
T/C 41855166 downstream_gene_variant
T/C 41855170 downstream_gene_variant
T/A 41855239 downstream_gene_variant
T/C 41855259 downstream_gene_variant
A/G 41855270 downstream_gene_variant
G/T 41855313 downstream_gene_variant
G/A 41855333 downstream_gene_variant
T/C 41855349 downstream_gene_variant
G/T 41855357 downstream_gene_variant
G/T 41855389 downstream_gene_variant
G/A 41855442 downstream_gene_variant
C/A 41855457 downstream_gene_variant
G/C 41855551 downstream_gene_variant
G/A 41855585 downstream_gene_variant
T/A,* 41855591 downstream_gene_variant
A/G 41855623 downstream_gene_variant
A/C 41855625 downstream_gene_variant
T/C 41855635 downstream_gene_variant
G/A 41855644 downstream_gene_variant
A/T 41855650 downstream_gene_variant
A/G 41855814 downstream_gene_variant
C/T 41855819 downstream_gene_variant
A/G 41855942 downstream_gene_variant
C/T 41856011 downstream_gene_variant
C/A 41856065 downstream_gene_variant
C/T 41856070 downstream_gene_variant
G/T 41856170 downstream_gene_variant
A/T 41856227 downstream_gene_variant
C/T 41856228 downstream_gene_variant
T/G 41856265 downstream_gene_variant
A/G 41856286 downstream_gene_variant
T/A 41856321 downstream_gene_variant
A/G 41856322 downstream_gene_variant
C/T 41856324 downstream_gene_variant
C/A 41856329 downstream_gene_variant
G/A 41856375 missense_variant p.Ala294Val
A/T 41856381 missense_variant p.Leu292His
C/A 41856392 missense_variant p.Gln288His
G/A 41856414 missense_variant p.Ala281Val
C/T 41856423 missense_variant p.Cys278Tyr
A/C 41856457 stop_lost p.Ter267Gluext*?
A/T 41856510 downstream_gene_variant
A/G 41856527 downstream_gene_variant
G/A 41856662 missense_variant p.Leu248Phe
A/G 41856664 missense_variant p.Leu247Pro
T/C 41856715 missense_variant p.Asn230Ser
C/T 41856718 stop_gained p.Trp229*
A/G 41856721 missense_variant p.Val228Ala
G/C 41856731 missense_variant p.Gln225Glu
G/A 41856744 synonymous_variant p.His220His
T/G 41856745 missense_variant p.His220Pro
G/A 41856758 synonymous_variant p.Leu216Leu
C/T 41856825 synonymous_variant p.Arg193Arg
C/A 41856839 missense_variant p.Ala189Ser
A/G 41856846 synonymous_variant p.Asn186Asn
T/A 41856847 missense_variant p.Asn186Ile
G/A 41856855 synonymous_variant p.Asp183Asp
T/C 41856859 missense_variant p.Lys182Arg
G/C 41856958 missense_variant p.Thr149Arg
A/T 41856964 missense_variant p.Leu147His
C/T 41856968 missense_variant p.Val146Ile
G/C 41857028 missense_variant p.Leu126Val
T/G 41857040 missense_variant p.Asn122His
G/C 41857071 synonymous_variant p.Leu111Leu
G/T 41857078 missense_variant p.Pro109His
T/C 41857082 missense_variant p.Thr108Ala
T/G 41857084 missense_variant p.Glu107Ala
A/T 41857110 missense_variant p.His98Gln
A/T 41857118 missense_variant p.Phe96Ile
C/T 41857127 missense_variant p.Ala93Thr
C/T 41857132 missense_variant p.Gly91Asp
C/T 41857136 missense_variant p.Gly90Ser
C/A 41857137 synonymous_variant p.Gly89Gly
A/G 41857230 synonymous_variant p.Thr58Thr
G/C 41857264 missense_variant p.Thr47Ser
T/C 41857268 missense_variant p.Ser46Gly
T/C 41857292 missense_variant p.Asn38Asp
A/T 41857306 missense_variant p.Leu33Gln
A/T 41857313 missense_variant p.Ser31Thr
G/T 41857355 missense_variant p.Leu17Met
A/G 41857371 synonymous_variant p.Ser11Ser
T/A 41857373 missense_variant p.Ser11Cys
A/G 41857384 missense_variant p.Ile7Thr
T/A 41857385 missense_variant p.Ile7Leu
A/C 41857390 missense_variant p.Ile5Arg
G/A 41857396 missense_variant p.Ser3Phe
A/T 41857402 start_lost p.Met1?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14005.1
MYSMIGIQRISFTFLLLLNFRSFITKAEEQSYLGSSCNNTAQQTLSTAYQTNLDRILTWMSSDSGTSNGYNITTIGSNNSSVYGLYYCGGGLAGYFCHVCISTAARETPRLCSNRVSAVVWNDYCLIRYSNEEFFGKAMTYPTWHVLGTKNISNITEIQIGEDFLRSLIRKATNGTNQLYYKDGFNLSATESRYSVVQCSRDLTNEVCRQCLEDILAELHKCCEQKLVWNIWSGSCLIRYDDYMFYLLNTQPPSAPAPNVQDKQGSNNRSKILIITFSVTGPIIVLCFSVYSFWHRKSVRKDVERRKQFDWKLRLSIINGIARGMFYLHEDSQLRVIHRDLKASNVLLDHDMNPKISDFGLARAFEVGQNQANTKRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNGRFYLSDGQILLVYAWRIWYEGKCLELMDPILEKSFIGSEVQRCIQIGLLCVQEDARDRPTMSDVVVMLVSDTVAIPKPKHPAFSVGRMVSEKGSTSRSSNNRSIYDITSSITLPSQNEQHHVFLQQGIKPD*


CDS Sequence:
>Vu_14005.1
ATGTACTCCATGATAGGAATACAAAGGATAAGTTTTACTTTCTTGTTACTGCTGAATTTCAGGTCATTCATTACAAAGGCTGAAGAACAGTCATACCTGGGAAGTAGCTGCAATAACACCGCCCAACAAACTCTCAGCACTGCATACCAAACCAACCTTGATAGAATCCTGACTTGGATGTCCTCAGATTCAGGCACAAGCAATGGTTACAACATCACCACCATAGGCTCCAACAATAGCTCTGTGTACGGCCTCTATTATTGTGGGGGTGGCTTGGCTGGATACTTTTGTCATGTTTGTATTTCCACTGCTGCAAGAGAAACCCCTCGGCTCTGCTCCAATAGGGTGTCTGCTGTGGTGTGGAATGATTACTGCCTTATAAGGTACTCAAATGAAGAATTCTTTGGGAAAGCTATGACATATCCAACATGGCATGTTCTTGGAACAAAAAACATATCGAATATAACAGAGATTCAGATAGGTGAGGATTTTTTGAGAAGTTTGATCAGAAAAGCAACTAATGGAACCAACCAGTTGTATTATAAGGACGGCTTCAATTTGAGTGCCACTGAGAGTAGGTATAGCGTGGTGCAATGCTCTAGAGATCTCACAAATGAAGTGTGCAGACAATGTTTGGAGGACATACTAGCTGAACTTCACAAATGCTGTGAACAAAAACTAGTATGGAATATTTGGTCTGGAAGTTGTTTGATTCGGTATGATGATTATATGTTCTATCTTCTTAACACCCAACCACCTTCAGCTCCTGCTCCCAATGTACAAGATAAACAAGGGAGTAATAACAGGTCAAAAATATTGATCATTACCTTCAGTGTGACTGGGCCAATAATTGTACTATGTTTCAGCGTGTATTCCTTCTGGCATAGGAAAAGCGTGAGAAAAGATGTTGAGAGAAGAAAACAATTCGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTATGTTTTACCTTCATGAGGACTCTCAACTGAGAGTAATTCATAGAGATCTCAAAGCCAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTGGGACAGAACCAAGCAAATACAAAACGAGTTATGGGCACTTATGGATACATGGCTCCTGAATATGCTATGGAAGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTCGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAATGGTAGATTCTACCTGTCAGATGGTCAAATTCTCCTTGTATACGCTTGGAGAATATGGTATGAAGGAAAATGTTTGGAATTGATGGATCCAATACTAGAAAAATCCTTCATAGGCAGTGAAGTACAGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGACGCAAGAGATAGACCAACCATGTCCGATGTTGTTGTAATGCTGGTGAGTGACACAGTGGCCATTCCAAAACCCAAGCACCCAGCCTTTTCAGTAGGAAGAATGGTCTCAGAGAAAGGCTCCACATCAAGAAGTTCCAACAATCGTTCCATTTATGATATAACATCCTCCATTACTTTACCTAGTCAGAACGAGCAGCACCATGTGTTTCTCCAACAAGGAATCAAGCCTGACTGA


Promoter Sequence:
>Vu_14005::LG3:41857403-41859403(-)
GCAAGGCAATGGGAAACACAACAAGTGGAGAGCAAAGCTGATGTGCCTTCCCGAAACAGGAAAGTCAGGGAATATTTTCAAAAACAAGCAAATATCCATAAATGTTCAAGTAGGACTTGGCAGCCAAATATATGTTTTTCTTTATCAGAAATAAACAATATTATATATGATGCAACACTTCGGGTATTCCAATTCTTTCCCTGTTTATTTACAAAGAGAATCACAAAATACTTCAAGGATTTTTAAGTCAAGCCATCTCTTACAACTATCTTCACTACTACCCAAAAGGGCCCTAAAAATAGTTGGTGACAAAATACAATGTGTATAACACCATTTCCTGCTTTATATTTCGTAACTTCATAGAATTTCCTTTTCTGCTTCTTTGTGGTACCTTTTGTTAAGAAATGGACAATAAACCTAATTAAACTCTACAAAATCGGGTTGTAAGTGAAGTTTGTACCTATATATACGCTAAATTGACCTTATCTCTAATTGATGTGAGACTTCTAACACACCTCCTCATGTCGAGATATATACATCTCGTGCGTAGGACTAAACATTAATGAATAGTCCGATAGCGAGTGAAACAATATGTCCAACAAACAACAAATGTTGCTAGGATAGGCTCTAATATTGGCTCTGATACCACATTAAGAAGTGGACTTTAAGCCAAACTTTGTTGAATATAGTGAAAAAGTATTTGTGGGATTAATCTTCCTCGTGTTAAATTCACACATAGGGTACTTAGAAATATGGACTAAGCAAAAAATACAAATAATAAATAATAGCAAACTAACTAAAGATAAAAGATAAAGATAATATATCTAACACTCTCCCTCAAGTTGGTGCATACAAATCGTATATACCAAGCTTGTTACTAATATAATCAATAAAGACTTGTTGAAAATATCTGCTTATGCACTCTAGTGACACCAAATTGTTAATGATTTTCGAATACGACATAGAAGATGAAATGTCAACCCAAAAGACTATCCTCAACAAAAAATTTGGGAGATTGCTTCATGTAAATGTCTTCTTGGAAATTGCCTTGAGGAATGCATTGTTGACATCCAAGAGATAAAGAGGTCATTGTTGAAGAGCTACCACGACTATAAATAAACTAACAAAAACCATCTTTGCTACAGGAGAAAAAGCATGGATGGTTCAATCGCAATAGTGACAAAAAGGGAGGTAAGAAGAGACAATAATGGAAGAAATCATTGATAAATATGATCCACACATTTATGTAATCTCTTAAAGTGTACCAAATTTTAGTTGACAAAAATACCTTCATATATTGTGAATTCTAAATTTTAAGGTTAAGGATATTTAAATAATTTTTGTTTTTTTTTGTAATTTTTTATTTTAAATTAAAAATAATTTTTTTATCAACTTAAATTTGGTATATTTTAAGAAGTTAAAAAACTCCATATATATATATATATATATATATATATATATAAACGCGTTCTTAATTTGGCCATTTAATAGATAAAATAAAAATGCACTACATATATAAGATCAAATTTAAAATATAATACATATACGAAGACCAAAAGCACTTTACACGCACAAAACCGATTTAATAAATTTTACTTAAAAACCCAAATTAAAAATTTCTCAGACGTAGGAACAACATTATTTTAAAATATAATCGATATTTTCTTGGTTATAGTTACCGTTAGAATAATACTGTTATCTATAAGCAAAATTGCATACGTAACTGATATCAGAAGCGCTGCCTTATTCAAACTCATAAGAACTAGTCATAACTTTGCCCAGACATGCCCTCAATTATTGGGTAGGTTAGTTGAAATTTAATGCATGTTAAATTTTAAAATTCCAAGTTTATCTTTTTTAATATTTACTGTTAAAAATGGTATTTTATTTAGCAATCAACAAAATTGACAATTGAGAATGAAAAACACATGAAACTCTTGGTTGTGAAATGAATAGCTTGCTATATGTTTCAATTGTTGTAGGAAATAACAAAATTAAAC


Gene Sequence:
>Vu_14005(-)
ATGTACTCCATGATAGGAATACAAAGGATAAGTTTTACTTTCTTGTTACTGCTGAATTTCAGGTCATTCATTACAAAGGCTGAAGAACAGTCATACCTGGGAAGTAGCTGCAATAACACCGCCCAACAAACTCTCAGCACTGCATACCAAACCAACCTTGATAGAATCCTGACTTGGATGTCCTCAGATTCAGGCACAAGCAATGGTTACAACATCACCACCATAGGCTCCAACAATAGCTCTGTGTACGGCCTCTATTATTGTGGGGGTGGCTTGGCTGGATACTTTTGTCATGTTTGTATTTCCACTGCTGCAAGAGAAACCCCTCGGCTCTGCTCCAATAGGGTGTCTGCTGTGGTGTGGAATGATTACTGCCTTATAAGGTACTCAAATGAAGAATTCTTTGGGAAAGCTATGACATATCCAACATGGCATGTTCTTGGAACAAAAAACATATCGAATATAACAGAGATTCAGATAGGTGAGGATTTTTTGAGAAGTTTGATCAGAAAAGCAACTAATGGAACCAACCAGTTGTATTATAAGGACGGCTTCAATTTGAGTGCCACTGAGAGTAGGTATAGCGTGGTGCAATGCTCTAGAGATCTCACAAATGAAGTGTGCAGACAATGTTTGGAGGACATACTAGCTGAACTTCACAAATGCTGTGAACAAAAACTAGTATGGAATATTTGGTCTGGAAGTTGTTTGATTCGGTATGATGATTATATGTTCTATCTTCTTAACACCCAACCACCTTCAGCTCCTGCTCCCAATGTACAAGGTGAATCTGAATCCATCTTTTTATCAACAAATATTAGTTTTTATTAGTGGAAGCATTCAAACCAACGGCATATCCCCTCCTCCGTCCCTTCCTCTTTTATCACCAAATCTACCTTATATTCTCATTCATCTTTCTTATTGTCGCAGATAAACAAGGGAGTAATAACAGGTCAAAAATATTGATCATTACCTTCAGTGTGACTGGGCCAATAATTGTACTATGTTTCAGCGTGTATTCCTTCTGGCATAGGAAAAGCGTGAGAAAAGGTAATTATCAAGAAAAAATGAAGGGTGGAGTTAGAGAATGTAACTTCTCCAAGCACACATTCCTTGATTTTCTCCTAGTCAAATAAAAATAGTTTTCTCATATATAAACTCACAACCTTCTCTCTGTAGAACGGCTTCCTCTACCATCATTTCACAAAATTCAACCAGGGGAAATGTGGAACACGGACCTGCCTAGAATCCCATTAATCACAATTCTAGAGAGTACTGATAACTTTTCAGAAGCATCTAAATTGGGGGAAGGCGGATTCGGCTCCGTTTACAAGGTTTGGATGATTTGAAGTTTCAGATATAGATTCCTTATTTTTACCAACTTTTTATATGGTTTTCTTTATTGCAAATTTTTATCAGGGAACTCTGCCTGATGGAACGCAAATTGCAGTAAAAAGACTCTCAGAATTTTCTGGTCAAGGCTCAGAGGAGTTCAAAAATGAAGTAATGTTTATAGCTAAATTGAGGCATCGTAACCTAGTAAGACTTTTAGCATGTTGCTCGGAGGGAAATGAAAAGATACTCGTATATGAGTATTTGCCGAATAAAAGTCTCGACTTTCACCTATTTGGTATGTTTTCACATTGTAAAATATGGAAATATGCTCTCTGGTACCAATTTTGTAGAATTATGAAAATATACTCCATTATAAATTTTCTGGAAAACTTTCCAGAACACACAAATACAAACAACATTTTACCCTCACAATACAACAATAATATACTCTTCAAAACTCACAAACAACAACACAACACAACTCTGTTTTTATCCTTCACCGTGGGTACTCTCCTTTCTTCACTCACAATACATAATTCTTTCTCTTCTTTCTTCTCCACAGTGGTTCTTCTCTCTCCCACATACTCCTACATATTTTTCTCCACTTCACGGTGCTCACACAAATACATCCGTGGCTATCCCTCTCTTTCTTTACTTTCACCATCTCTTCCATGGTGCACACACATGAAAGTGTGCCACACTTGACCACACCTTCCTCTATATTTTCTTTCTTCTCCGTGGTGGGTATGTAACCCCTTGCTTTCTCTTCTATTTATAACAAACTCCACTTCCCATCTTTCACGGTTGCTAGCCATGACATCAATCATGCACCAAAGTCTTGCAACCAAAGACTTGCAACATACAAAAGCTGCTGCCGTGGAAAACTTTGCACATCCAAACAAAGGACTTTTCTACTTTGCACAAAAGGTGGGGAACATTCATTCCCTTATTCAACAAATGAGCCCCATCACATTTACGTTTATCCAACACACATAACCCCAGTAGCAGTGTTGCTTTCACTGCAATTTGTTCTTCAGCATTCGACAGTACAAAAATAGAATTGGTTCCCAAGTAAAGTGAGAAAACTAAGAGCATGAGAACACGATCATAATAGCTAACACAGTCATACCATATTTTTCTTTCTTTCATATACACATTACACTAAATTCAGTTATATCATGTTATAACTCATCTTTCAAGGGGAAGTGATAGATTCTTTTGGTTTTTTATCTCTTCGTGTGGCTAAATCATAGCATTTGGTGTATTTTCTATTTTTCTGCTTACCACACCGTTTTGTTGTTCAAATCTCTATGATTTTATTGTGCTCTCAGATGTTGAGAGAAGAAAACAATTCGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTATGTTTTACCTTCATGAGGACTCTCAACTGAGAGTAATTCATAGAGATCTCAAAGCCAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTGGGACAGAACCAAGCAAATACAAAACGAGTTATGGGCACTTAGTGAGTTTACTTATGACAAATACTTTGAAAACAATACGATTTATCAATGCATATTTTAGTTTTTAATTACAGTAAAATAAAATTCTTTGCTATATGTTTCTTGACACGAGATAATAACAAAGGTCTATTGATTTCCATTTATTAGTGGATACATGGCTCCTGAATATGCTATGGAAGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTCGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAATGGTAGATTCTACCTGTCAGATGGTCAAATTCTCCTTGTATACGTAAGTCTCCACTCTAATGTGGTATAGAAATTATTTACAATGCTAAGAGAACTAAGGCTTAAGCTTATTAAAAAAACTACAAATACATGTGTAGGCTTGGAGAATATGGTATGAAGGAAAATGTTTGGAATTGATGGATCCAATACTAGAAAAATCCTTCATAGGCAGTGAAGTACAGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGACGCAAGAGATAGACCAACCATGTCCGATGTTGTTGTAATGCTGGTGAGTGACACAGTGGCCATTCCAAAACCCAAGCACCCAGCCTTTTCAGTAGGAAGAATGGTCTCAGAGAAAGGCTCCACATCAAGAAGTTCCAACAATCGTTCCATTTATGATATAACATCCTCCATTACTTTACCTAGGTAATTTCATGATTGCACAATGGATTTGTATATATCTAAAGTTGCATTTATAATTGATTTAAATCAAATTATTTATTAATTTATCTAGTCATATTGACATTATATGTACCCCTACTTTTTACTTTAGAATATAGTCCAATCTCCAATATAAAAATCTTGCTTTTGTTGCGTAAGAAAATACATCAATTTCCAAGAAAAAACTGCACAGACAAAAATACGGCATCCAACCACAGTTCATAAAACAAAATTATAATCACAAAGCCAGGTACCTAAAATTGCTTGGGTGAGAAAACCATCCCCGGTAACATTGCAAGTCCTTGTCAAAGTCAGAACGAGCAGCACCATGTGTTTCTCCAACAAGGAATCAAGCCTGACTGA