Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13999 LG3 41754738 41757842 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 41754826 missense_variant p.Val30Ala
T/C 41754859 missense_variant p.Val41Ala
C/G 41754895 missense_variant p.Thr53Ser
T/C 41754930 missense_variant p.Trp65Arg
G/A 41754932 stop_gained p.Trp65*
T/C 41754986 synonymous_variant p.Pro83Pro
C/T 41755004 synonymous_variant p.Gly89Gly
C/G 41755076 missense_variant p.Asn113Lys
A/G 41755091 synonymous_variant p.Ala118Ala
A/T 41755241 synonymous_variant p.Thr168Thr
A/C 41755376 synonymous_variant p.Gly213Gly
T/A 41755409 synonymous_variant p.Pro224Pro
A/T 41755456 missense_variant p.Glu240Val
G/A 41755592 synonymous_variant p.Pro285Pro
A/G 41755759 missense_variant p.Asn341Ser
T/A 41755768 missense_variant p.Val344Glu
A/G 41755834 missense_variant p.Asp366Gly
G/T 41755851 missense_variant p.Val372Leu
T/C 41755983 missense_variant p.Tyr416His
C/T 41756025 intron_variant
T/G 41756047 intron_variant
G/A 41756087 intron_variant
G/C 41756130 missense_variant p.Trp426Ser
G/C 41756153 missense_variant p.Asp434His
A/G 41756154 missense_variant p.Asp434Gly
T/C 41756183 missense_variant p.Trp444Arg
T/G 41756283 intron_variant
A/T 41756307 intron_variant
A/T 41756309 intron_variant
A/C 41756373 intron_variant
A/G 41756423 intron_variant
G/C 41756454 intron_variant
A/G 41756466 intron_variant
T/A 41756654 intron_variant
G/T 41756662 intron_variant
A/C 41756697 intron_variant
C/T 41756859 intron_variant
A/C 41756883 intron_variant
G/A 41756887 intron_variant
G/C 41756925 intron_variant
A/T 41756940 intron_variant
A/T 41756941 intron_variant
A/T 41756942 intron_variant
C/T 41756947 intron_variant
A/G 41756965 stop_retained_variant p.Ter452Ter
T/G 41756991 missense_variant p.Ser461Ala
C/T 41757090 missense_variant p.His494Tyr
C/G 41757262 intron_variant
G/A 41757298 missense_variant p.Arg533His
G/C 41757378 missense_variant p.Val560Leu
T/G 41757479 intron_variant
C/G 41757581 synonymous_variant p.Ala593Ala
G/A 41757606 missense_variant p.Val602Ile
T/A 41757660 missense_variant p.Tyr620Asn
A/G 41757665 synonymous_variant p.Pro621Pro
A/G 41757670 missense_variant p.Asp623Gly
T/A 41757702 missense_variant p.Leu634Met
A/G 41757706 missense_variant p.Glu635Gly
C/T 41757720 synonymous_variant p.Leu640Leu
T/A 41757772 missense_variant p.Val657Asp
C/T 41757781 missense_variant p.Ser660Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13999.1
MGVIHAFVIIFACMLVLSLEISGANDSINVAQFLRDGNTLVSKGGKFELGFFTPGSSQKRYLGIWYKNIPVTTYVWVANGANPINDSSGILTVNTTGNLVLTQNGSLVWHSNNSHKQAQNPVVEMLDSGNLVIRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGLERKYTAWKSQDDPSPGDVSRVLKLYNYPEVYMMKGTQKLLRYGPWNGEYFSGMPDLLNNTIFGLSFVSNEDEIYYTYTLVNDSVPTRTVTNQSGTIVRYVWKEDEKTWKTYRTYPKESCDHYDTCGPNGLCVRTQSQPCNCLKGFSPKSPQNWNSSDWKEGCERNKALNCNSDVFLIFKGLKVPATTDTWLNKSIDLKECKVKCLKDCSCMAYTNSDIRNGGSGCVLWFGDLIDMKQIETGGQDLYIRMNASEAEPGPSKHTLTIVASTVAAICGVLILLNDKRGKFLEWPQRFQIICGIARGLVYLHQDSPLRIIHRDLKASNILLDKSFNPKISDFGVSRSFGVDQFEGSTSRVVGTCGYMAPEYAVDGLFSEKSDVFSFGILVLEIVCGKRNRGLYQTDKSLNLVAHSWTLWKAGKAIDFIASNMKTSSCVMSEVLRCLHVGLLCVQQYPDDRPTMKSVILMLESHIALAEPKEPGFLSRNVLPKVLGSNMNDTSSTNEVTITLLEPR*


CDS Sequence:
>Vu_13999.1
ATGGGTGTTATTCATGCTTTTGTGATTATATTTGCATGCATGCTTGTTCTCTCACTAGAAATTTCGGGAGCAAATGATTCAATCAACGTGGCCCAGTTTCTGAGGGATGGGAATACTTTGGTATCAAAAGGTGGAAAGTTTGAACTTGGATTCTTCACCCCTGGTAGTTCCCAGAAACGTTATCTGGGAATTTGGTACAAGAATATCCCAGTTACGACGTATGTTTGGGTTGCTAATGGGGCCAACCCTATCAATGATTCCTCAGGCATCTTAACAGTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGTTCTCTTGTTTGGCACTCCAACAACTCTCACAAACAAGCACAGAATCCGGTGGTAGAAATGTTGGACAGTGGCAATCTTGTGATAAGAAACGAGGGAGAAACAAACCCAGAAGAGTATTTGTGGCAAAGCTTTGATTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACAGGTTTGGAACGGAAATATACAGCATGGAAGAGTCAAGATGATCCATCCCCAGGTGATGTATCTCGGGTTTTGAAACTCTATAACTATCCTGAGGTTTATATGATGAAGGGTACACAAAAGTTGCTGAGGTATGGACCATGGAATGGCGAATATTTTAGTGGAATGCCTGATCTACTGAATAACACCATTTTCGGCTTGAGTTTTGTCAGCAACGAAGATGAGATTTACTACACGTATACCCTCGTTAATGATTCTGTCCCCACCAGAACTGTTACAAACCAATCAGGTACTATTGTTCGTTATGTGTGGAAGGAGGATGAGAAAACATGGAAAACATACAGAACGTACCCGAAAGAGTCTTGCGACCATTATGACACCTGTGGACCTAACGGATTATGTGTACGAACTCAATCACAGCCTTGCAATTGTTTGAAAGGTTTCAGTCCAAAATCACCACAAAATTGGAACTCATCGGATTGGAAGGAAGGATGTGAGCGCAATAAAGCGTTGAATTGCAATAGTGATGTGTTTCTCATATTTAAAGGGCTGAAAGTTCCAGCCACTACAGATACTTGGTTGAATAAGAGTATTGATCTAAAGGAATGCAAAGTGAAGTGCTTGAAAGATTGTTCTTGCATGGCCTATACTAATTCAGATATCAGAAATGGAGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAACAGATTGAAACTGGTGGACAAGACCTGTATATCAGGATGAATGCTTCGGAGGCAGAACCTGGACCGAGCAAGCACACACTAACGATAGTTGCTTCTACCGTTGCTGCAATTTGTGGTGTTCTTATACTTCTAAATGATAAAAGAGGTAAATTTCTGGAGTGGCCTCAACGGTTCCAAATAATTTGCGGAATTGCAAGGGGCCTTGTGTACCTTCATCAAGATTCCCCACTGAGGATCATCCACAGGGATCTCAAAGCTAGTAACATCTTACTCGATAAATCGTTCAATCCGAAAATATCAGACTTTGGTGTGTCGAGATCTTTTGGAGTAGACCAATTTGAAGGAAGCACAAGTAGAGTAGTGGGGACCTGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTATTTTCTGAAAAATCTGACGTATTTAGCTTTGGAATTTTGGTGTTGGAGATTGTCTGTGGGAAGAGAAACAGAGGACTTTATCAGACAGATAAGAGTCTTAACCTTGTTGCTCATTCATGGACATTATGGAAAGCGGGCAAGGCAATAGATTTCATTGCCTCGAACATGAAGACATCATCGTGCGTTATGTCTGAAGTACTGCGTTGTCTCCATGTCGGTCTTTTGTGTGTGCAACAGTACCCAGATGATAGGCCTACAATGAAGTCTGTGATTCTAATGTTGGAGAGTCACATTGCACTGGCTGAGCCAAAAGAACCTGGTTTCCTTTCGAGAAATGTGTTACCTAAAGTTTTAGGCTCAAATATGAACGACACAAGTTCAACCAACGAAGTGACCATTACTCTGTTAGAACCTCGATGA


Promoter Sequence:
>Vu_13999::LG3:41752738-41754738(+)
TTTTTCATTTTCTACCATTGAGGTAGCTTTTAACAAAGCTTTTCTTTTAAAGATACCAATATTACAAGGACTCTGATATACCTGATAAAAGAGGACGGTCACTTCACTTCATGAGAGACAAGTTTTTTTGGCAAACCCAAGTCACAATAGTATAGTAGAGTAACTAAGGGATGAATTATGGCTCATCCATCTCTATTTAACTTCTAAACCTAATGGGTCACTCCAATTCCATCCAAGCACATGGATTTTGCACCCTTCCGCAAACCATTTTTGTTTACAAAAGCCTCTATTACAAACACACAAACATAAATTTGGATTACCGATTGGTTCAATTATAAGACAAACTAAACACTCTTTACATACCTTCTAATCATGAAAAGACTAGAGGACTGGTGTATTGTATTAGACAAAGACTTATTGGTCCTTCCATGTAATGTTTATAGCCTCAACAATAGAATGCCAAACATCATGGACTAGATATCATAAGGATGCATGGATGAACTTGGTCAAAAGGTGAAGCTCGTTTGACAAGTAATTGGACTAATGGACTTCAAGCTGATGGGCCCACATAAGTTGTGGCCATCTAGTTGAACCCATGCTCAATGGGGTGAAACATTTAAATAGAGTATTAATGATAATTTATAATTCATTTTTGTATTAATTGAGATTTGACTAAAATTTTTTGACTAAGTACTAATTCCAGTGTTGGAGAATCTTTTGTTAAAATTCCTTTTTGTGGTTGTAGAGTGTTGGAGGATAAGCACCTAATAGTGAGGAATGCAGCAAGTGATAACAAAATCTTTATAAGATATATTTGTTCGGTTATGAAAGATCAATACTCATTTTGATATTTTATTTATATAATGAGTATCAAATGCAAGTTTTGTACTCTATTTTTATTTAATACTTTGTCTATAATGATAAAATTTATAAGAAAATATTCATTAGATATCAAAGTCGTATGTTCAGAGCAAATGATTAAGGTGTAACGTCAGTTAACTACCCAATTGGTATATATATTATAGATTCAAATGAAATTTTAACTAGCCAGTAGTTATCGCATATATGAAAGGCGTGTTACAGGTCGCTTACATATGCATAATAAAAAAAAAAGTCGTACAAAAACAAAATATCATTGGCCAACTAAGAAATTAACGTCTTACAGGAAAAAATATCATCGATAACTAGTATTCATTATATCGAACTATTTTTAATTATTGCTTTCTCCGTTTCTTGTTAAATTTTTGAAAATTTTGTGTTTGAACTATTATTACGAAATTGAAAGTCATATTAATTATTCTTTTATCAATTATAGTACTATAACAAAAAAAAAGTGTTTCTTAATTTCTATAAAAGACAAGATGAAAAGGAAAAAAAAAATGCGAGTAGAAACTATTAATATTGTAAGTGTAAAAACTAAAAGTATTGTTGATATATATAACTTACTAAAGATCTATTTAATAATTAGAATGTTCGTATGTTTCTGGATATTTGGAACAAAGTGTCAAGTATTAATTGTCCAAATTAAAAAGATTTAATTAGTTATATAAGTTTAACAGATTTTTTTCTATATACATACACATGTCCATTTCAATCCGACTCACATCTTACGTTGCTCTAGAAGTTGAACTTGAATAATCATACATTGAAGCAATCTCGTCAACTTGACCTATAAAAACAACTAAACAATATAGGCAGAAAGTAAACTCTTATCTAAGCAAAAACTCATAGACAATCTTATCCTTTTGTTTACTGATTCATCTCGACCATAAGAAAATAAGGGACTTATGGTCGAGATGAATAAAAGATTCTGAAAACAACATATAGTTAAAGATCACAAAAGGCTACGGTGTTGACTTGAAATTTAAGTTAGTTTCGATGAAGAACCAAAGTATACGTTAGAGACTCTCAGGTTCGCAGATTTTACTAGTCATACTCCTGCTTAGTCCATATATTTACATTATCCAATAACCAAGTTCCACAAAAGCTTGGATACAATA


Gene Sequence:
>Vu_13999(+)
ATGGGTGTTATTCATGCTTTTGTGATTATATTTGCATGCATGCTTGTTCTCTCACTAGAAATTTCGGGAGCAAATGATTCAATCAACGTGGCCCAGTTTCTGAGGGATGGGAATACTTTGGTATCAAAAGGTGGAAAGTTTGAACTTGGATTCTTCACCCCTGGTAGTTCCCAGAAACGTTATCTGGGAATTTGGTACAAGAATATCCCAGTTACGACGTATGTTTGGGTTGCTAATGGGGCCAACCCTATCAATGATTCCTCAGGCATCTTAACAGTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGTTCTCTTGTTTGGCACTCCAACAACTCTCACAAACAAGCACAGAATCCGGTGGTAGAAATGTTGGACAGTGGCAATCTTGTGATAAGAAACGAGGGAGAAACAAACCCAGAAGAGTATTTGTGGCAAAGCTTTGATTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACAGGTTTGGAACGGAAATATACAGCATGGAAGAGTCAAGATGATCCATCCCCAGGTGATGTATCTCGGGTTTTGAAACTCTATAACTATCCTGAGGTTTATATGATGAAGGGTACACAAAAGTTGCTGAGGTATGGACCATGGAATGGCGAATATTTTAGTGGAATGCCTGATCTACTGAATAACACCATTTTCGGCTTGAGTTTTGTCAGCAACGAAGATGAGATTTACTACACGTATACCCTCGTTAATGATTCTGTCCCCACCAGAACTGTTACAAACCAATCAGGTACTATTGTTCGTTATGTGTGGAAGGAGGATGAGAAAACATGGAAAACATACAGAACGTACCCGAAAGAGTCTTGCGACCATTATGACACCTGTGGACCTAACGGATTATGTGTACGAACTCAATCACAGCCTTGCAATTGTTTGAAAGGTTTCAGTCCAAAATCACCACAAAATTGGAACTCATCGGATTGGAAGGAAGGATGTGAGCGCAATAAAGCGTTGAATTGCAATAGTGATGTGTTTCTCATATTTAAAGGGCTGAAAGTTCCAGCCACTACAGATACTTGGTTGAATAAGAGTATTGATCTAAAGGAATGCAAAGTGAAGTGCTTGAAAGATTGTTCTTGCATGGCCTATACTAATTCAGATATCAGAAATGGAGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAACAGATTGAAACTGGTGGACAAGACCTGTATATCAGGATGAATGCTTCGGAGGCAGGTGAGCAGCATCAGCTTTGATCTTTTAATTTCGATTTCTATTTTGAAAACTGAAAAATGTTATTCACTTTAGACATGACTGTTTTTGTTTTTATAATCAATTCCAACACTCAAGAACCTGGACCGAGCAAGCACACACTAACGATAGTTGCTTCTACCGTTGCTGCAATTTGTGGTGTTCTTATACTTCTAAGTACGTATATTATTTTCAGGCTCCAGAGGAACAAAGCTGGTGAGTAAATCGTTTAACATATCACTTCACTTACTCTCTACTGTTATTAGGATAATAGTCAACCAACAATTCCTTCACAACATGGCACTTACTTAGATAAAATCATGTAAAGAAATCATTGGGATTTTTTTAGATTAACTGTGTTCCTTTATCTGCTATATTATACATTCCTTTATGTGTAAGAATTTCATGCACAGAAGACTTAAGTAAAAGACATGTGGATGATCTGGATGTCCAACTGTTTGATCTAGTAACAATTGGAAAGGCGACTAATAACTTCTCCACAGAGAATATAATAGGAGAAGGTGGTTTTGGACATGTATACAAGGTAACTATTCTTTAATAATCATCACTACAATCAAAGAAAATAACACTGTTAAATATTTTCCCAAGTGTCTACTCATGGCAAGAGTATGCAGGGCATAATTGACGGGAAAGAAATTGCTGTAAAGACTATGTCAAGAAGCTCATGGCAAGGTGTGACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAACTTCAGCATCGGAATCTTATTAAACTTCTTGGTTGCTGCATTCGAGGAGAAGAAAGAATGCTCATTTATCAGTACATGGAAAATGGCAGCCTAGACTCCCTTATTTTTGGTAAGAAAAATGAGATAAGCATAAATTGGGTTGCTAATGCATTGGTGAAACATGCAGATTACTGAAATAAAAAATTTTCCAAAATAAACAGATGATAAAAGAGGTAAATTTCTGGAGTGGCCTCAACGGTTCCAAATAATTTGCGGAATTGCAAGGGGCCTTGTGTACCTTCATCAAGATTCCCCACTGAGGATCATCCACAGGGATCTCAAAGCTAGTAACATCTTACTCGATAAATCGTTCAATCCGAAAATATCAGACTTTGGTGTGTCGAGATCTTTTGGAGTAGACCAATTTGAAGGAAGCACAAGTAGAGTAGTGGGGACCTGGTCAGTGTGTGTTTATCCTAAACCATTATTTTTTCTGTCTTCACAAATATGTAAAATTGTTCTTCATGCATGAAACAATCTCTTGCAGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTATTTTCTGAAAAATCTGACGTATTTAGCTTTGGAATTTTGGTGTTGGAGATTGTCTGTGGGAAGAGAAACAGAGGACTTTATCAGACAGATAAGAGTCTTAACCTTGTTGCTCATGTGAGTTCTTGAATTAATATATTTTTATTTTTCGTGTTCGTTTTGCTGAAATTTAACAAATATTTATCTTTTTTCTAATGCTTTTATTACTTTAAAATAGTCATGGACATTATGGAAAGCGGGCAAGGCAATAGATTTCATTGCCTCGAACATGAAGACATCATCGTGCGTTATGTCTGAAGTACTGCGTTGTCTCCATGTCGGTCTTTTGTGTGTGCAACAGTACCCAGATGATAGGCCTACAATGAAGTCTGTGATTCTAATGTTGGAGAGTCACATTGCACTGGCTGAGCCAAAAGAACCTGGTTTCCTTTCGAGAAATGTGTTACCTAAAGTTTTAGGCTCAAATATGAACGACACAAGTTCAACCAACGAAGTGACCATTACTCTGTTAGAACCTCGATGA