Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13996 LG3 41709232 41712495 PREDICTED: transcription factor bHLH123-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 41709413 missense_variant p.Ala61Val
C/A 41709451 missense_variant p.His74Asn
A/G 41709452 missense_variant p.His74Arg
T/C 41709456 synonymous_variant p.His75His
A/G 41709634 intron_variant
A/T 41709637 intron_variant
G/A 41709642 intron_variant
A/G 41709731 intron_variant
C/T 41709772 intron_variant
G/A 41709788 intron_variant
C/T 41710047 missense_variant p.Ala139Val
A/T 41710226 missense_variant p.Thr170Ser
C/T 41710285 synonymous_variant p.His189His
C/A 41710418 missense_variant p.Pro234Thr
C/A 41710452 missense_variant p.Pro245Gln
G/T 41710525 missense_variant p.Glu269Asp
C/T 41710561 synonymous_variant p.Pro281Pro
C/T 41710623 intron_variant
G/A 41710638 intron_variant
C/A 41710644 intron_variant
T/A 41710658 intron_variant
A/G 41710662 intron_variant
T/C 41710719 intron_variant
A/C 41710747 intron_variant
G/A 41710757 intron_variant
T/C 41710788 intron_variant
A/G 41710843 intron_variant
A/G 41710865 intron_variant
G/C 41710896 intron_variant
T/A 41710925 intron_variant
A/G 41710926 intron_variant
C/T 41710941 intron_variant
C/G 41711138 intron_variant
A/T 41711190 intron_variant
T/A 41711196 intron_variant
G/T 41711251 intron_variant
G/C 41711263 intron_variant
A/T 41711423 intron_variant
G/C 41711650 intron_variant
G/T 41711679 splice_region_variant&intron_variant
G/C 41711715 missense_variant p.Gly381Ala
A/G 41711858 intron_variant
C/T 41711859 intron_variant
G/T 41711862 intron_variant
C/A 41711896 intron_variant
T/C 41711964 intron_variant
T/A 41711965 intron_variant
G/T 41711974 intron_variant
A/T 41712057 intron_variant
C/T 41712067 intron_variant
G/T 41712087 intron_variant
A/T 41712103 intron_variant
A/T 41712128 intron_variant
A/T 41712186 intron_variant
C/T 41712191 intron_variant
G/A 41712196 intron_variant
C/G 41712208 intron_variant
T/A 41712231 intron_variant
T/G 41712233 intron_variant
G/A 41712240 intron_variant
G/C 41712262 intron_variant
T/A 41712284 intron_variant
C/T 41712294 intron_variant
G/T 41712373 missense_variant p.Gly398Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13996.1
MSDDQFQASGNWWESARNVRFESGETQSSSSGLTNMGNYAWQQDMARSSSMDNSASGGSSAVFHDQKQLQVQPHHDSSATNPTNDHPNLHMMGLGLSSQAMDWNQASLQLRGEKDSEGSFRSMLQENLSSPGTTFQQESGNNNIALSHHQQFSPQYSSGDSTVTSQGLPCTFQMDYVGNPSSILQGLLGHESNNQQPHQGGSASFENRSMNFPYSATSYGLSSNIELVPSWSKVPQFLRASPPKQPPNNQLHFTNNAPFWNANSEPAIKEARSSFISSLQTPFSPSNFDVQSKNLSEVRESGVVKKSGSETAPKRPRNENPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKTGAPIQHQQSSGKSKESEGPKQDLRSRGLCLVPVSSTFPVTHEPTVEYWTPTFGGTYR*


CDS Sequence:
>Vu_13996.1
ATGTCAGATGATCAGTTTCAAGCAAGTGGAAACTGGTGGGAATCAGCAAGAAACGTGAGGTTTGAGAGTGGTGAAACGCAGTCTTCTTCTTCTGGCCTCACCAACATGGGAAACTATGCTTGGCAGCAAGACATGGCTAGGTCTTCTTCCATGGATAACTCTGCCTCAGGAGGTTCCTCTGCGGTTTTCCATGACCAGAAGCAGCTTCAAGTTCAGCCACATCATGACTCATCAGCCACAAATCCCACCAATGACCATCCCAACTTGCACATGATGGGCTTGGGCCTCTCATCCCAAGCCATGGACTGGAATCAAGCATCTTTGCAGCTACGAGGTGAGAAGGATTCTGAAGGCAGTTTCAGGTCGATGTTGCAAGAGAATTTGAGCTCTCCAGGCACCACGTTTCAGCAAGAAAGCGGGAATAACAATATTGCGTTGTCTCATCATCAACAATTCAGTCCTCAATATAGCTCTGGGGACAGCACTGTCACAAGCCAAGGTTTGCCTTGTACTTTTCAGATGGATTATGTCGGTAACCCTTCTTCAATATTGCAAGGACTTTTGGGACACGAGAGCAATAACCAACAACCCCACCAAGGTGGTAGTGCTTCTTTTGAGAATCGTTCCATGAATTTTCCTTACTCAGCAACAAGCTATGGATTAAGCTCAAACATTGAGTTAGTGCCTTCTTGGTCAAAGGTGCCTCAGTTCTTAAGAGCTTCACCACCAAAACAACCACCCAATAACCAGTTGCATTTCACCAACAACGCTCCCTTTTGGAACGCTAATTCTGAACCTGCTATAAAGGAGGCTCGATCCAGCTTCATCTCCTCTTTGCAAACCCCCTTCTCGCCATCAAATTTCGATGTTCAATCAAAGAATCTATCTGAAGTTAGGGAGTCGGGTGTGGTGAAGAAAAGTGGGAGTGAAACAGCACCAAAAAGGCCCAGGAACGAAAACCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCGTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTCACCGTTTTAAGCACCCCCTATATGAAAACCGGTGCTCCCATACAGCATCAGCAGAGTTCTGGTAAATCGAAGGAATCTGAGGGTCCAAAGCAAGATCTTAGAAGCCGAGGGCTATGTTTGGTGCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCACAGTTGAATATTGGACACCAACGTTTGGAGGAACTTACAGATAG


Promoter Sequence:
>Vu_13996::LG3:41707232-41709232(+)
TTCTATAGACTTATTTTGGGGAGGAGACATAAAAGTTTTGAAACTTTGGACTCAATCTAGCCATACGTCAAAATTTATTTTCTTTAATTCTATGAAGTACAAGTCGCTGTGTACAATTTTGTTAATTTTTAAATTTTTATTTTTAATGATAACAAATATTTTTAAAATTTTAGTAAAAAGTTTTCTATTTGTGCTAAAAACAGAAAATAAACATGCATGCATCTTTAAATTTTTATCAACAATGATATCAGATGAATTTAAATATAACCTGTAAGATTCGGGAAAATAAGGGTTTTAAAGATAAAGTAGTTGAAACTTTGGGTTTTAGTTTGAAAATTAGTGTTCTTGAGTGTATATTTTTGTTAAAACATAATTGTTATGTTATTTCTTTATTTTTATATTTTTGCCTAGGGCCAACAGAGTCTTTTACCTTTATTTAATTGGTGTGGAAATTTATTAAGGGGTGGTTTGATGTTTAGAAACCGTAGAAACTCTAAATCAAAGAAAGAAAGGGATTGACGTTTTGGGAGAAGAACAAAGAGAACGACGAGAAACTCTTAGTGTAAAAGAAGATTGGTAGTGTTTTAGGATTGTAGATAAAGCCTTATGATTGGCCAAGGTATGGGGAAACTTACCTTTGTTTGTTTATGGTTGTATGTTATATTTGTTCTTAATTATCTTGATTGGTAATCCTTGTTTTGATAAATGTGTATATGATTATGATTATCTGTGGTTATGTAATATTCGTGATGATATTTCCCTATGAATGTATTATGTATGTTTTGTTGGGTTATTCCAATAGAGGGTTTGATGCTAAGGGAGAACAAAGTTATGTTGCTTGAGGGTTTCCATGCAAATATAAGTTGTAAGTGTTGGGTTATTGAGCTCCCTTCCTATGTGGAGAATATGCCAAATAATGTGGACCATTATGTCTTACTTTATTTTAGATGGGTCAAATTAGTAGGACACAATAGAGTCATTTGAAGAGAAGGGAAAAACCAAGTGACAAAGAAAGGAAGAGAAGAAGTCATTCCCGCATAACATAAAACTTGTACTGGTGTTTTCGTCAGTGTGAAGTCGTTCACTATTGGATCGGACTGAATTTTGGACAATGGGTTCGAGACGTATGGTTCTTCATTCTGACCGCTCGGATCGTCAATCGGAAGTCTAGTTTGGGAGAAAACAACCTCGCATCAACAACTTTGTTTTGGAGAATTTTCATCTTCTTGGTTCTCATTTGTAAGCATTATGCTTAGTTAGTTCATCTAATTGAAAACCTTATTTGATGTTTTTATCAGAGACTTTTTCGCACCCTATTATTTGGTATAATACGTCAATGATTAGATCTAGATGGTTCAAGTGATATATTATATGTGATTGAGTATGATTACATAAATATATGATACTTGAATGCATCTATGATGTGTTCGACATGTATGTATTTTGAAGACTTATAAACTTTTATCTTAACAGAAGATATATTTTGTTGTAATAATCTTTAAAAGGATTGTTATAGTAAAATCTCGTAGGAATCTAAAAATTGGTTTAATTCCACAATATTTACTAAGGTTATTGAGTAGAAGAAGAAAAATCAGTTTTTCTAGACGGCGGGCAGACGTGAAGGAAAAGATAAATTGTGCACAATGATAATAATAAAGAATAAGTCAAATTCTGATTTTTTAAAATGAGCTTTAATTTAATTCCACTGTCTAATCACCCCCTGAATTGTCAAAGAGCGTCAACGATATTCGTCTTAGTTTGTCACTGTTCCCATTCCCTCACCAAACCCATTTTTCTCCCTTCACTTCCCAATATAAATACTCCAAACTTTCGAACCCTTTTCCATTCATTCATTTCTGTTACTCTCAGTTCTTCACAGTTCACACAGCTCCACAAAGATACACACACTCTAATAACACAAACTGACATACATAACATCCTTAGTTTTATCAAATACTTTCATGTTTATGTGAAGGGTGAAGCAGAAGAAGTTTCAGCCA


Gene Sequence:
>Vu_13996(+)
ATGTCAGATGATCAGTTTCAAGCAAGTGGAAACTGGTGGGAATCAGCAAGAAACGTGAGGTTTGAGAGTGGTGAAACGCAGTCTTCTTCTTCTGGCCTCACCAACATGGGAAACTATGCTTGGCAGCAAGACATGGCTAGGTCTTCTTCCATGGATAACTCTGCCTCAGGAGGTTCCTCTGCGGTTTTCCATGACCAGAAGCAGCTTCAAGTTCAGCCACATCATGACTCATCAGCCACAAATCCCACCAATGACCATCCCAACTTGCACATGATGGGCTTGGGCCTCTCATCCCAAGCCATGGACTGGAATCAAGCATCTTTGCAGCTGTAAGTGTAGTCTGTGTCAAGACAAAGACTTCTACAACAATACTACTAAAAAGTAGTACCCAAAAACTAAAATAAAAAAAAGAAAAGAAAAAGTAATTGGATCTTTCGTTTTCTGTTTTTCTTTCCCTTCTTTCATTCTACCTTACCAGAATGGAATAACATTGAAGAAAAGAAAAGCAGTTTTAAAGGTATTAAATTGTAGTGATGTTCACCGTCGAAGTTGCTTCGGTTTCTATGCAATCTTTGCCATTGTGAGAAATTGTAGAAAAATGCGACCGATGCAGCCATGATTGTGATGGCGACAGCAAAAGCCTTCACGGTTATGACTGAAATCGTGGTTGCAAACCCTTTTTCTAAAACTTTGCTAAGTTGTAACTTTTGTGTGTATGTTTGATGTAGACGAGGTGAGAAGGATTCTGAAGGCAGTTTCAGGTCGATGTTGCAAGAGAATTTGAGCTCTCCAGGCACCACGTTTCAGCAAGAAAGCGGGAATAACAATATTGCGTTGTCTCATCATCAACAAGTTCATTGGAGGACCAGAAAAATTGTTCTCTGCGGAGTCATCAAGCAATGAATTCAAGAGGGGTTTCTCCTTGGACCAAACACAGTTCAGTCCTCAATATAGCTCTGGGGACAGCACTGTCACAAGCCAAGGTTTGCCTTGTACTTTTCAGATGGATTATGTCGGTAACCCTTCTTCAATATTGCAAGGACTTTTGGGACACGAGAGCAATAACCAACAACCCCACCAAGGTGGTAGTGCTTCTTTTGAGAATCGTTCCATGAATTTTCCTTACTCAGCAACAAGCTATGGATTAAGCTCAAACATTGAGTTAGTGCCTTCTTGGTCAAAGGTGCCTCAGTTCTTAAGAGCTTCACCACCAAAACAACCACCCAATAACCAGTTGCATTTCACCAACAACGCTCCCTTTTGGAACGCTAATTCTGAACCTGCTATAAAGGAGGCTCGATCCAGCTTCATCTCCTCTTTGCAAACCCCCTTCTCGCCATCAAATTTCGATGTTCAATCAAAGGTTGCATTTCACTTTTGCTACACAGATACACAATTAAGTTATCGCAGTACTTAAGTTTAAACTTAAAACTTCATATCAACTGTTTAAAATCCCCACCACTATGCGATCATAACACTATGATATATGATGATTCGTTAATATACTTTAAATCTAGAAAAATCTGTTCAGCTTTTTGTTTTATTATTCTCTTATTTACAATTTTCTTGTCTTTTACGCTTAACTACAATAATGTACACATAAAAAGTATGACATGTTTTACTTTTATTAAGGATTAGAACTTTTTTCTTGGTTAAATACTAAAGAAATAAATAATGAAGTTTGTATTTTCATTAGGGTTGAAATGAAGCAGCTGCAATAGAGGAGTTGTTTATGTTGGTTTTGTTGACCATGGTTTTGCAGAATCTATCTGAAGTTAGGGAGTCGGGTGTGGTGAAGAAAAGTGGGAGTGAAACAGCACCAAAAAGGCCCAGGAACGAAAACCCATCTCCTTTGCCAGCTTTTAAGGTACAATAAGTGCAACTGAACTTTTAAGTTGAAGGGAAGCTAGCTTTAACCTTTTTATCTTTAATTTTTCTCTCTTTATTTATTCTTTATCACATACTTTTAGCTCATATTTTTCGATTTTTGAGTCCTTAAACATTGGATATGAACCCGTAGTGTACCTCTTTGTGTTGTTCTTAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGGTGAGCTTCTGATAAAATCATCTATTCTTTTCTAATATCTTTTGTGGATGACCATGATTTCTTGTGAGTATTTATGATATAAAAGAAAGCAGAAAAAGATGATGGCAAGTGTGATTGTACTAATATTGTTAATTGATTTCAAGTTTTAAAATCTGTTCGCAATGTTGTGTGTCAGACTGATACAGCGTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTCACCGTAAGTCCCATCAAAACTCACATTAATATATGCATATATGATTATTCAGAAATTATAGTTTGAATTAGATAATTTTAATCTTATTCATTCTCTCCTGTTTTTAGGTTTTAAGCACCCCCTATATGAAAACCGGTGCTCCCATACAGCATCAGCAGGTACTATATATACGTATATTTATACATTTCCTTTTCTTAAAAATAGCTCCAGAATGAAACTGAATATTTTTACGTCAAACTTCTTTCGTCATATTGCTACTTTGAAATTTTATTTCTTTCACGAGTTGAATTTTATTATACTATTCCTCTAATGATTCCTGTACTGACAACTAAGATCCCGTGTATGTATAATTCTCTACAAATATATATGTATATACAAAAATTTTTAAAAAAATGAAAAGTATATAGAGCTTTTTCTGCAATACAATACTTTCGCTTTTGATTTTGTTATGAAGATAAATGATTTTTTTTTATAAAAAATAATGATACGATGATATACATTTACATTGATTAGAAACATATTAAAAAAATAAAATAGTTATAAAAAAAATTGTATATGATATAATAGTATTATTCTGTTAGATTTATTTTTTTAGTTGTTTATGGAAAAAGCAGTAGACTCAAACTTTCAATATAACAAGATTACGTGAAATTTAAATGAGTGGATCTGTTTTTTATTATAGGAAGAATGTTGTTAATGATATTTTGTTTGAATCTGAAGGGTTTATGTTGATAATGTTGTTTTGTTTGTCCTTTTATGAATTCAGAGTTCTGGTAAATCGAAGGAATCTGAGGGTCCAAAGCAAGATCTTAGAAGCCGAGGGCTATGTTTGGTGCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCACAGTTGAATATTGGACACCAACGTTTGGAGGAACTTACAGATAG