Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13959 LG3 41070426 41073590 PREDICTED: putative serine/threonine-protein kinase
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 41070565 intron_variant
G/A 41070570 intron_variant
T/C 41070946 synonymous_variant p.Ile62Ile
C/G 41071083 intron_variant
C/T 41071143 intron_variant
C/A 41071173 intron_variant
A/C 41071187 intron_variant
T/C 41071329 upstream_gene_variant
A/G 41071413 upstream_gene_variant
C/T 41071460 upstream_gene_variant
T/A,G 41071524 upstream_gene_variant
A/G 41071573 upstream_gene_variant
T/C 41071657 upstream_gene_variant
T/A 41071685 upstream_gene_variant
A/T,* 41071776 upstream_gene_variant
A/T 41071778 upstream_gene_variant
G/A 41071879 upstream_gene_variant
A/G 41071921 upstream_gene_variant
T/A 41071984 upstream_gene_variant
C/G 41072093 upstream_gene_variant
A/G 41072099 upstream_gene_variant
T/A 41072128 upstream_gene_variant
C/T 41072138 upstream_gene_variant
T/A 41072182 upstream_gene_variant
T/C 41072196 splice_acceptor_variant&intron_variant
G/A 41072316 missense_variant p.Asp141Asn
T/G 41072345 splice_donor_variant&intron_variant
T/G,* 41072347 splice_region_variant&intron_variant
G/A 41072348 splice_region_variant&intron_variant
T/C 41072357 upstream_gene_variant
G/A 41072406 upstream_gene_variant
A/G 41072469 upstream_gene_variant
G/C 41072549 upstream_gene_variant
T/C 41072949 upstream_gene_variant
A/T 41073059 upstream_gene_variant
A/G 41073111 upstream_gene_variant
G/A 41073248 synonymous_variant p.Ala161Ala
G/A 41073258 missense_variant p.Ala165Thr
A/C 41073284 synonymous_variant p.Ala173Ala
A/T 41073467 missense_variant p.Lys234Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13959.1
MTCFPFSFGRKVPPVARHNPDIDEELSGVQNGLLKDGNLAAIKVLSAESTQGVKEFMTEINVISEIEHENLVKLYGCCVEGNNRILVYNYLENNSLAQTLLGYLAPEYALRGHLTRKADIYSFGVLLVEIVSGRCHTNTRLPIGEQFILETTWELYQRRELVALVDASLDGHFDAEEACKFLKIGLLCTQDTSKLRPPMSSVVKMLTGEMDIDESKITKPGLISDFMDLKIRGDKKDGDIETKGSSSASDSQGNTMAFTASTSTTTTFTLKYDQSL*


CDS Sequence:
>Vu_13959.1
ATGACTTGCTTCCCATTCTCATTTGGTAGGAAAGTGCCCCCTGTGGCAAGACACAATCCAGATATTGATGAAGAACTCTCTGGCGTTCAAAATGGATTACTAAAAGATGGGAATCTAGCTGCTATAAAAGTTCTTTCAGCAGAATCAACTCAAGGGGTGAAAGAATTTATGACAGAGATTAATGTGATTTCAGAAATAGAGCATGAAAATTTGGTTAAGCTATATGGATGTTGTGTGGAAGGGAACAATCGAATACTAGTCTACAATTATCTTGAGAACAATAGCCTTGCACAAACCCTTTTAGGTTATTTGGCACCAGAGTATGCATTAAGGGGGCACCTCACACGTAAAGCAGATATTTACAGCTTTGGTGTACTCCTTGTGGAGATAGTGAGTGGAAGATGTCACACTAATACACGGTTACCGATAGGAGAGCAGTTTATTTTAGAAACGACATGGGAGCTTTATCAGCGAAGGGAATTGGTAGCGCTTGTAGATGCATCCCTAGACGGGCATTTTGATGCAGAGGAGGCCTGTAAATTTCTGAAAATTGGACTTCTTTGCACTCAGGACACATCGAAACTCCGGCCACCAATGTCTTCTGTGGTCAAGATGCTCACTGGAGAAATGGACATAGATGAAAGCAAGATAACAAAGCCAGGCCTGATTTCAGATTTTATGGATCTTAAAATCAGAGGAGATAAAAAAGATGGTGATATTGAAACCAAGGGTTCATCTTCTGCTTCAGATAGCCAGGGTAACACCATGGCATTTACTGCAAGTACAAGTACAACCACAACCTTCACTCTTAAATATGATCAAAGCTTGTAA


Promoter Sequence:
>Vu_13959::LG3:41068426-41070426(+)
AAATATTCAGCAAGTTGTCGTAGCATTAAAGTTGTTGAAAAGAAGAAAAATAATCATTTCACACTCATCTTTATTTTAAACAATGACTTCACAGCTGTTTTGATAATAAAATATTATATTAAAATAATAATCATAACAATAATAAATATAAATAATGTTTTAAAAATAAAATAATAGTATAAATAGTCGTAATGCATATATAATATATCAACATTATCAACCTATATCAACTCACTGCATGCGTGTACTTTAAATGATAATTTCTAGCTTTGGTATTCACCACTTTATTATTGATAATGTAAATAATAATTAGTAATTTCTAGCTTTTTTAATATTATTAAAATTTACCCTTTTGCATTTGAATATAACGTTTTTGAGCAAAAATATATTTGACCAATTTTGCATGAAATCATTATCAAGCAATTCACTAATTCAAATTACAATTGCACTGTCAACTTGATCAATTAATAGTAAAAGACGGATAAATCTCTTGATTATTTTTTCTAATGAAATTTTTTTTACTTATTGTTTAAGTTTGAAGTTTTTTATTATAGTTTTTTTAGATTTTAGAATTTTGATAAATATTTAAATAAAAGTTAATATATTATATTTTTTTAATAAACCGTCGACATTTCTAAGCATTTATAAGTCAAAATTTCAAACTTGACCGTTGTTGAGACTAGACTGTACACTAAGTATATATGAACACATATTTTGTAATAAAAACATGTAAAACTTTTAACTAATAATTATTAGAAGACTCTAATTATGATTTGACTTTTTTTTTAGAATTATGAAAAATTAGTTTGCTAATTTATCTTCATATAGTCTAAGTCAAGTCAATGCATAGAGAGAACAGATTCACACTGCTGACGCGTCCTCCTCACACCACGTGGTAAGTTTGATAAATAAATGGCACACAGAATAGAAACCCACAACACGACATCATCGTCGTAATTTCGGACACTGTTCTCCTTGTTGACCAAACCCACCCTACTCATCATATTTCTTACCCTTTCTTCTCATCAATCAGAAAAGGCTTCTCTTTTTTGTTTCAATTTTTTCTTTTCTGTTTTCATCATTTTCTAAGGTTCGTTACAGCACTTTTAGTTTCTGGATAATCTTTTGGTTTATTTTTCTTTTACTTGTCTCTAAAATTTATGATTCGGCTCCTTATTTGTCTCTCTTGTAGTTTATTCTAGTTCCTGAGATAACCCAGTTCACATTTTTATTCTCAATGCTCTTTGAGCTGTGAAAAGCAGCTCGAAATGAAGGATTAAGAAGATATTAACACCTACACACACAAAATTGTAGTTTAAAGCAAGAGAACTGTATGAAAAATAGGGTGTAGGTGAAAAAAATGGTTTTTCATTTGAGATTATGCTTTTTCCAGAAACAGGGCATGTGGAAATTATGAATTCAGTGGTTGAGATACTGGTAAATAGTTCGTTTTAGTATAGATGTGAAGAAGGGTGTTAGGAATGGACTTTTTCGGTTAATTTTGGAGAAATAATCATCTTTTCAGAAACCCTCTTGGAAGGCAGCAAAAAGGAATGATTTTGGGAACTAATGATGCAAAATTTGTTTGTTTTAGTTGTATGGCTCTGGGAACTAAAGATGCATCTTTTCAAATTTGACTACTTGAACTGCAATATGATGCTGATATTTGTGCATTGAGTTTAGTTTAATAGAACTGATATCTTTGGAATATTGAAAAAAATGTTGGAGCCTTGACCATGATTCTAGTTATTATTTTTTTGTATGTTTCATCTGATGTAGTAATTGACATACTATGAATGTAGTTTGTTTTCTTTCATGTTTTAAGACCTGAATTTTTAGCATTATGGTTATCATTTTCTGTACATCGTACTTCCACTTTATGATTCTAAGACAGACATTTTTATGTGCTTCTTCCAGGTAACCTTGGAACTGGTTTAATTCAAAGATACTTATTCCATTTGACATTATAGGCCGTGTTCGAATATTCCATCCTCCAGTCA


Gene Sequence:
>Vu_13959(+)
ATGACTTGCTTCCCATTCTCATTTGGTAGGAAAGTGCCCCCTGTGGCAAGACACAATCCAGATATTGATGAAGGTAATTTAACAATGTTAGATTAATCTTCAAGAATATTGTTGTAGAATTAAGATACCTATGATAAAATGCATGAAAAATCTGTTTGCAGTGCTTGATTTTGACTGAATATGTTTGAAAACAGAACTCTCTGGCGTTCAAAATGTAAGAATCTTTACCTACAAAGAACTAAGAGTTGCATCTGACAATTTCAGTCAGGCCAATAAAATTGGGCAGGGTGGCTTTGGTTTTGTTTATAAGGTAATTAAGTAATTTTAGAATGTTGTTTGCATCATCATATCCATTTGATTGATCACTATTTTTCTGCTCCTTTCCTTATCAGTGAAAACTTAATAATATTGTGGTGGATGATCAGGGATTACTAAAAGATGGGAATCTAGCTGCTATAAAAGTTCTTTCAGCAGAATCAACTCAAGGGGTGAAAGAATTTATGACAGAGATTAATGTGATTTCAGAAATAGAGCATGAAAATTTGGTTAAGCTATATGGATGTTGTGTGGAAGGGAACAATCGAATACTAGTCTACAATTATCTTGAGAACAATAGCCTTGCACAAACCCTTTTAGGTAAATGCTTTGTAATTTTGTCGTAAAGTTTTCTGAGAAAATCTGAGAACAGGACTTCGTATTGTATCATTTAGAATATCACGGAGTTGTTATGGTAATTTAATTTCCTTACCAAATTCTTTCTGAATAACTTATTTTCTGTTCACTTGCAGGTTCAGGTCACAGTAGTAACATCTTTTTTGATTGGAAAACACGATCTAGGATTTGCATTGGGATTGCACGTGGGCTCTCCTATCTGCATGAAGAAATAAGACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAAATCTTATACCTAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCATCATACATGACTCATGTCAGCACACGTGTGGCCGGAACAATGTAAGCATTCTAATAAACATCCTTTGCATGAATTGGAAACTTTTATTTTCCTTTTCCATCCCAAAAAGTTAGACTTTATCTCTTCAATATCCTTAGACTAATATTCTTCATGTTTTATATGGCACACAACATGATTATAATGTGGTTATTGGTCAGACTTATATACCATAATGCTGAAAATTTTGAGAATAGTAGAATGCAATTGGCTTTATTGATTCTATTCAATATTTTATATAAACTGATTTTGCTGTAAATTTGTGACTTTGAAATTTATATTCACTTTACTTCAAATTATCTGTTATTATTTTTCTTTAGTAATCCAGACAAGGGATTCCTTTGGTTGACCCTTTGCTCTGCAAGATTTGTAGTCCATTAAATTCAGCACACCACAAAATTCTTGCTTATTGTAAATTCATCATCAACCGGAACACAACAGAGATCATTGAAATTCTTGATAGAGATCAGGAATTCTATTATTCAAATATACATAACCTGGTTAATAAAACTGTTGTAGTAATTCTCTTCCTCCTGTGTTGGAAATCCTACTTTAACTAGAGATATGGTGAAACTATTATACTTTAAAGTTCACTTTCTAAGATGTTGGACCTAGAGATTACTTCATAACCTTTCAATTCTCACATGATATAGAGAAAAGCTTCCCTTGTTCTCTTAGTTTTTGATTCCCTTTACTTACCAATTATTTATGTCAGGAACTTAATGCTGTATCTTTTGTTTCAGAGGTTATTTGGCACCAGAGTATGCATTAAGGGGGCACCTCACACGTAAAGCAGATATTTACAGCTTTGGTGTACTCCTTGTGGAGATAGTGAGTGGAAGATGTCACACTAATACACGGTTACCGATAGGAGAGCAGTTTATTTTAGAAACGGTATGTCATTTTATTTTCCTAGTTGTATTGCTGTACTTTTACTGTTTACAAATACATAGTCAGAGGGAAAAAATAAATTGGTTTATTGTACTCATCTCCCTATTAATAAGCAAAATTCTTCGGGTACAATAAATTGAGTTACTTTCACTGCCAAGTATGTGATAACATAACCTTTGCAGAAGATGGTGACTTTAAACATCAAAATGATTCCAAGCCTCTTCTGAGTTATGTTTCTTTTCGTTTGACAAATGGTTTGTTTGGATTTTCACAAGCAAAATTAGCTTATGAAAATAAAAATTTAGAGAAGCTAGATGGAAAAGCTTCTACAAATTATCTTAATGGGGAAGCTAAGTTTAACTTTGCTTATGGAGAAACTCGTCCAAACAGGTCCAAGTTTTAGTCTCCACTAATTTTATTTTTGTTATATTCGCTCTCTTCTTTCTACTCTTGTTTTCCATCCAAGTTCCATTCAATTGTGATTGATTATGAAAGCTCTAGTTTGATCCTTCAGCATGAAAGACATTGAAATTTTGGAGTCATGCTTTAAATTAAAAACCATGAGTTGTGAGAGTTTACTTCTAGCCTCAAATTACATTTGTTAAACCTATCAAACAATTCTTATGCTAGTATCAGAAGACTGTATCATATCTGAAAGAATCTTTGTTGTTTGAAATCTGAAACATAACACATTTTTTTCAGCCTGACACACTTGACCACTTCATTTTACATTACAGTACACTCATATTCTGACATTAAGATTTTTTTCTACCAAGCTTCTTCTCTTGTTGTCTCTATGTTTTTCTTCATATATGTTGCTTTTTTATCCATTTTTACACAATGTGAGACTCTAACTTATACTTAATCGTCAGACATGGGAGCTTTATCAGCGAAGGGAATTGGTAGCGCTTGTAGATGCATCCCTAGACGGGCATTTTGATGCAGAGGAGGCCTGTAAATTTCTGAAAATTGGACTTCTTTGCACTCAGGACACATCGAAACTCCGGCCACCAATGTCTTCTGTGGTCAAGATGCTCACTGGAGAAATGGACATAGATGAAAGCAAGATAACAAAGCCAGGCCTGATTTCAGATTTTATGGATCTTAAAATCAGAGGAGATAAAAAAGATGGTGATATTGAAACCAAGGGTTCATCTTCTGCTTCAGATAGCCAGGGTAACACCATGGCATTTACTGCAAGTACAAGTACAACCACAACCTTCACTCTTAAATATGATCAAAGCTTGTAA