Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13950 LG3 40917703 40921949 B-box zinc finger protein 22 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 40917820 missense_variant p.Thr40Ser
C/T 40917822 synonymous_variant p.Thr40Thr
C/T 40917928 intron_variant
C/G 40918096 intron_variant
G/A 40918112 intron_variant
A/T 40918140 intron_variant
T/C 40918150 intron_variant
T/A 40918215 intron_variant
T/C 40918218 intron_variant
T/A 40918224 intron_variant
T/A 40918451 intron_variant
C/G 40918580 intron_variant
A/T 40918637 intron_variant
G/A 40918747 intron_variant
G/A 40918886 intron_variant
A/T 40918887 intron_variant
T/A 40918955 intron_variant
T/C 40918995 intron_variant
G/C 40919075 intron_variant
T/A,* 40919099 intron_variant
C/A 40919230 intron_variant
C/T 40919275 intron_variant
G/A 40919302 intron_variant
C/T 40919304 intron_variant
T/C 40919369 intron_variant
T/C 40919422 intron_variant
G/A 40919484 intron_variant
T/C 40919507 intron_variant
T/A 40919511 intron_variant
T/A 40919512 intron_variant
T/C 40919816 synonymous_variant p.Asn148Asn
A/T 40919819 missense_variant p.Glu149Asp
C/A 40919827 missense_variant p.Pro152His
C/T 40919882 synonymous_variant p.Gly170Gly
G/A 40919909 synonymous_variant p.Gln179Gln
C/T 40919957 synonymous_variant p.Tyr195Tyr
G/A 40920113 intron_variant
C/T 40920159 intron_variant
A/G 40920178 intron_variant
T/A 40920235 intron_variant
C/A 40920281 intron_variant
C/T 40920318 intron_variant
G/A 40920381 intron_variant
C/T 40920388 intron_variant
T/A 40920442 intron_variant
G/A 40920535 intron_variant
C/T 40920548 intron_variant
G/C 40920564 intron_variant
C/A 40920580 intron_variant
G/A 40920587 intron_variant
G/T 40920588 intron_variant
A/G 40920596 intron_variant
T/A 40920617 intron_variant
A/G 40920636 intron_variant
C/A 40920646 intron_variant
T/A 40920706 intron_variant
T/A,* 40920730 intron_variant
A/G,* 40920746 intron_variant
C/T 40920752 intron_variant
T/A 40920759 intron_variant
T/C 40920809 intron_variant
A/T 40920823 intron_variant
A/T 40920843 intron_variant
A/G 40920930 intron_variant
T/C 40920931 intron_variant
T/A 40921055 intron_variant
A/G 40921340 upstream_gene_variant
G/T 40921382 upstream_gene_variant
G/A 40921435 upstream_gene_variant
C/A 40921478 upstream_gene_variant
A/T 40921576 upstream_gene_variant
T/G 40921664 splice_region_variant&intron_variant
A/G 40921682 synonymous_variant p.Lys208Lys
G/C 40921831 missense_variant p.Arg258Pro
G/A 40921936 missense_variant p.Arg293Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13950.1
MKIQCNVCEAAEAKVLCCADEAALCLECDEKVHAANKLATKHQRVPLSLSASHVPKCDICQEMVGYFFCLEDRALLCRNCDVSIHTVNACVSGHQRFLLTGVRVGLEATEPGASSSSVKSQSGEKTSDAKSSSISRNVSSMPQPPNFNEVFPSEMGGVEDFPPNKVSYGGGYTAGNISQWPMEEFLGLNEFSQYYNYMDGSSKADSGKLGDSDSSVLRSSEEEIDDDGFLGRVPDSSWTVPQIPSPPTASGLHCPELRRYTSDNAMFVPDICFSGERRQPRRVLHHSIHSKRRRNL*


CDS Sequence:
>Vu_13950.1
ATGAAGATTCAGTGCAACGTGTGCGAAGCTGCGGAGGCCAAGGTCCTCTGTTGCGCAGACGAAGCCGCACTTTGCTTGGAATGCGATGAAAAGGTTCACGCCGCAAACAAGCTCGCCACCAAGCACCAAAGGGTCCCCCTTTCTCTCTCTGCTTCCCACGTCCCTAAGTGTGACATATGTCAGGAAATGGTTGGTTATTTCTTCTGTTTAGAGGATCGGGCTTTGCTATGTAGGAATTGTGATGTATCTATTCACACTGTTAATGCCTGTGTCTCTGGTCACCAGAGGTTTTTGCTTACTGGTGTGAGAGTAGGCCTTGAAGCTACTGAGCCTGGTGCTTCCTCGTCCTCTGTCAAATCACAATCTGGGGAGAAAACATCTGATGCTAAATCTTCATCCATCTCCAGAAACGTTTCCTCCATGCCACAGCCACCAAATTTTAATGAAGTGTTTCCCTCTGAAATGGGAGGAGTTGAGGATTTTCCACCAAACAAGGTGTCTTATGGTGGCGGTTATACTGCTGGAAACATCTCACAGTGGCCCATGGAAGAATTTCTCGGGTTAAATGAATTCAGTCAGTATTACAACTATATGGATGGATCATCTAAGGCTGACAGTGGTAAACTTGGGGATTCTGACTCATCTGTTTTGAGGTCTAGTGAAGAGGAAATTGATGATGATGGCTTCTTGGGGCGTGTTCCAGATTCATCCTGGACAGTTCCTCAAATCCCTTCCCCTCCTACGGCTTCCGGATTACACTGCCCGGAACTCCGGCGATATACATCTGACAATGCTATGTTTGTTCCTGACATATGCTTTTCCGGCGAGCGGAGGCAGCCTCGCCGTGTTCTTCATCATTCTATTCATTCAAAACGGCGGAGGAACCTATAA


Promoter Sequence:
>Vu_13950::LG3:40915703-40917703(+)
TTAAGACTTTAGTTTTAACCGTTAATTTATGTTAAATTATACATTAAGACTGTAGTTAGACCTCCAAGTTTTGAATGTTTAGATAAAATAAACTTATTGGAATAACATTTTAAAAGTAGCTAAATAGAGCTTTAAATTTATTTTCGTCAAAAAATAAACTAATTCGTCTAATCAAAGGTAGATCAAACAACATAACAAATAAATATGCATGTTGTCAGGTAGGCAAAACTTGTCATCTTCACCGAGAAGCATGCTCACTAGAGATGACCTTATATGAGATGTAACCTTGACTTATATTGGGTGATTGGGTAGCTTAGGACACATTTCATCACATTAACATCCACATTTTCACATAGAGAACACTAGTCAATTTAATTGGGAATGTTGCTCACTAGATATTACCTTAAATGAGATGTAATTTTATCATGCATTGGATGGTTGAGATGCCTTTGAACATGTGTCATCCAATAACATGCATGTTTCCATGCATGCAACACTTGTCAACCTAATTGGGAAGGCTTGTTCAACATATGTGACCTTGAAGATGTAATCCTAACATACATTAGATGATTGAGGTGACATAAGATACATGGCATCAAATAAACAAAGATGTTGTTACACATGTATCACTAGTCAACCACATTAGAAACTAGTGCTAACTAGAGATGACATTGGATGAGATGTAACTTTAACATTGGAATCCTTAAAGGCAACTTATGACATGTGTTATCAAATAAACATGTACATTACCTCAAATGTAGCACTTGTCAACCTTATTAAGAACGAGTACTGATCAAAGATAACTCTAACGTTACCTCAAATGTAACACTTATCAACCTTATTAAGAACGAGTATTGATCAAAGATAACTCTAACGTTACCTCAAATGTAGTACTTGTCAACCTTAGATGAAATTTAACTCTAACATACATTTGATGTTTAAGATAACTAATAACATGTGTATAAAATAAATATACATATTAACTCGGGACAACTTAACTAGTAACATATACAAATATCAAATTTATTTATTTACATATATAAACATCACTATTATAAGCATAAAATTATAAAAAATTAAGTTAAAAATGTTACTTCTAAAATTTATTTCTATAATTTCCTTCTTTCCTTTCCAACAATCATTATTTAAATTTATTTTCAATTAATCAATATAATTTTTTTTTTCATATTCACTATACACAACTCAGTAATTTCAATTATATAAATAATTTCCCATTCAATTGTTCTTAAAATTATTTATTTCCTCTACTTCTGCATAAATTTTTATTATTTACATATTTTCTTATTTATATTTGCTTAACATATATGCGTACTTATAAATAATTATTCACTCAAACATATTTTTCAAAATTAATATATTAAATAAACATATTTTTTAACTTAATATGTTTTTTACAACTCAATAAATTCAATTATATATCTTTTCGTTATTTTCTTACAATTCTTTCTTTTCTATTTTCGTTCATTAAATATTTCTTATCTACATATTTTTCTAATTTATATTTTTTTTAAATATATCTATTTATAGAAATATAGTTATCTAATCTTTTTACTTATTGAAATATTATATCCTACACACTTATTTTTTAAATTAAATCTCCTTTTCATTATTTTAAAATAAATAAAAAACTAACTCAAAGGTCAAAATTTAACTCTTCGGGAGTCGAAGTTTGACATGAAACCTAACAGAACAATGTGTTATCCGAGAAGGAAAAAAAAAGACAAAGTATGCCATTTAGGTGAAAATTACAGTAATGTGAACGAACCGGTCCGGTCCCAACCCGGCGAAGTCGGTGACCCAGGCACGTGGCATTGATCTTCACGCTCTTCAAAAATATCGCGCATTTTGTTCTGCCCTTCTCACTCGGCCCTCGTGTTCCCTTCTCTCTCACACACCCAAGCTTTAAAATTTCCTCTTCTCTCTCGAACCCCTTCCAACTGGGTCACAATAACTCGCTCCAACTCGGTTCAGAATCACCA


Gene Sequence:
>Vu_13950(+)
ATGAAGATTCAGTGCAACGTGTGCGAAGCTGCGGAGGCCAAGGTCCTCTGTTGCGCAGACGAAGCCGCACTTTGCTTGGAATGCGATGAAAAGGTTCACGCCGCAAACAAGCTCGCCACCAAGCACCAAAGGGTCCCCCTTTCTCTCTCTGCTTCCCACGTCCCTAAGTGTGACATATGTCAGGTATCTCATGTTCTTGCTTCTTAACTTTCCTTTCATGGAAAACCCTTTTCAAATTTATAAACTTTAATATATGTTACAAAGTGGGTTTATCATTTTATGTGTTATAATTTGTTACATGCAAGTAAAATCTTCATCCATTTCTATAGTTGTTTTCAATGATTAATGTTTGGTATCAGTGAACTTAACCTTGCTGGATTTGTGAAAATACAACTTGGGGGATGGATGAGAAGCCTCTTATTAGTATTATTTGGGTCAAAACATGTTTTGTTCCATCAAGGTATTTCAAAATGTCGGTTTTAGTACTGACCAAAATTGATTATGTTTCTAGTTCATATATGTACTAAGTTCATATTGAGTTATACTTAAAATTTACTTTGTTGAATGCTATCACTTATCGTTTGTGGCTATCATGCCAAGTGTTATAAGACTGCTATTATTAAACCATCCAGAAATATCTAATTCCACTAAGTGAGTGCCATAAATAGTTAATCCCATATTCAGAGTAAGTGGGTGCAAGTCCTGTTCAGGAGTAGTGCAAACAACAACCTCTCTAACACACTTTTCCTAGTACCCCTTAATATTGATCAAAATTTATTGGAAAGTTCATATATTTACTATGTCGGTTTTGATTTACTCTTAAAATTTACTTTCTCATGTTAAATCACATCTTATCTTTTGGGGGTTATCATGTCAACTGCCATAATATTAGATCATCTACAAATAAGTAAGTGGGTGCCCACAAATATCTAATAACAAACTAGAGTTAGTGCAAACCCTGTTCCGGTGTAGTGCAAACAACAGCCTCTCTAATACACTTTTCCTAATAGCCCCTGTTGTTGATCAAAATTTATTGGAAATTACGTTATCATGAATGGAGTTCATTAAATATGAAGTGAAAACTATACAATTTTTGTGATTTTTAATAAATTACATTCAATTATGAATAACGTTGTTAAATAGTGTTCTTTTAAGTAGCATATCTTTTCCGGATGAATGCAGGGACTGAAAGTGTATTGAAGTTTTTTAGGAACTAGACTAACGGTTCAAAAATAACTTTTTACAAGGTTACTTACCAGTTACCGTTGCTGACTTGTAACCACTTGTGCTAATAGATGGATATTCTTTCCTTATAAAAACAAGGATTAAACTTTGATTCATCTGTTCAGGGGACTTTACTTTCACTTTGTGAGCCTTTATGCATTTAGTGACCTTGTTGTTGTTCAGCGTTGAATGCAGTTATTAACTTCCCTATTTTGACTGAGTTTATTAAGTGACTATTGTACAGTTATAGTGTGTTAGAAAACATTTTTAGATATGATAAACTTTTCACGGAAGATAAAGTCTCAAGAATGAATTTTTCTTTGGAGCTTTGAAAACAAATTTCCTCACCGAGTGCATTTATCTTTGATTCAAATTGGCATTTTGAGGATTTTATGTGATAAAGTTCCCTGTTATAGAAATGGTTCGAATGTGGCATTTGCTTTGTTTTTTGTATTTTTTCAGAATTTTGTCAAACCAAATTATTTGTGCTTTGAATTTGTGGTTGGCTATTTGACATTGTTAGCAAGAGAGAATTCTCTTGATCTGTTAGCTTTTCTGGTTTAGTTACATATGAGTCTTTTATTTTTTTGGATTGCTTGTGATGTTGAAGTGTGCTATTCACCTTACAGGAAATGGTTGGTTATTTCTTCTGTTTAGAGGATCGGGCTTTGCTATGTAGGAATTGTGATGTATCTATTCACACTGTTAATGCCTGTGTCTCTGGTCACCAGAGGTTTTTGCTTACTGGTGTGAGAGTAGGCCTTGAAGCTACTGAGCCTGGTGCTTCCTCGTCCTCTGTCAAATCACAATCTGGGGAGAAAACATCTGATGCTAAATCTTCATCCATCTCCAGAAACGTTTCCTCCATGCCACAGCCACCAAATTTTAATGAAGTGTTTCCCTCTGAAATGGGAGGAGTTGAGGATTTTCCACCAAACAAGGTGTCTTATGGTGGCGGTTATACTGCTGGAAACATCTCACAGTGGCCCATGGAAGAATTTCTCGGGTTAAATGAATTCAGTCAGTATTACAACTATATGGATGGATCATCTAAGGTACGCTTTTTAGTTGCAATGTAGTCAATTCGTTTTGTGTAGCTTCTATTCTTTTTTGCGGTGGTAGGGTAAGGGGAGTTAGAACTCTGATAACCAGATACATTTCTATCTATGAGGCACAATTGTGATAAGTGTATCATCAATAATTTATAAATTAAATATTTCATTAATAAATATCGATAAAGTATCGGATACAAATATGTGTAAGATATAGATACTTGTTAGATAAAGATACGTGCATCATAGATTTTTATCATGTCTTTACAGTATGTATAGCCGACCCCTCCTACTCTATCTCACAAATTTATGTATGTATTGGTGCTGGTACAATAATGTCGATGGCTACATTAATCTGCATCAGGTTCCTACACTAGGCATGCAAATGCATTACTGTATAGAGAGAAATCTCAACTATGATGGTACCCCGGTCTATACCTATCATATTCGAATATGTTTTACTTTAGTTTTTGTTTCCCTTTGGTTAAGAAAGTAATGGGAACTTAATCATAGACTTCCATTATAGTCAAACAAATGACGGATAAGAGCATCCTTTGCTAGGAAGGCAGCGTAAACTTGATAGGAGTAGAAGTAGTCCAGACTTTTGGGGATCCTACATTAACTAGAGATAAGACGAATTTATAGAATATAAATAAGACAAACCTCACCTTACAAGCAAGTTTAATATGATAGAATTAGGTTTAAAGTTCATTTTTTAAAATGGTATTAGAGTCATCCAAAACTTATTCTATCGGTATTTGTTGTTTATTGGACCTATAGTGTCATCCACTATTAAACTTCTGGAAGTTAATTCCCTTTTAACATGTTATTGTAGTATCACTAAACAATGGTCAAATAGGTCCCATAAATATGTGAAAAATTTATTGTGAGAAATAGAGCTTTTTCTTGGTTGAGAGATTAAAAGGCTTTATTTTGGAAAAAAAAAAACAAATACACAAAGGAGATTCCTACTTTCTCACCAGAATCTGTCCATTTTGTAACTAACAAAAAGAAAAGCTCCCCTCTTCAACAACAAAGATCCTATTTAAAGATTTGGGGACCAACTTCTGTTATAATCTAACATCCAACCATAGCCTCCACAACAGAAACTAACTCCCTTATGACAGAAATCCTAACTAACATGCAAAAAGATAAAATAGGTTTAAAACCTATTTTGACCCTTTTTCCTATAAATGATAAGGAGTAGTCCTGTTGATTTTGAGTACCACAAAACTTCTGATATTGTCAGGAAGAGAATGTGAGGAAGTTGATCTAGTTTAAAAGATATGCACTTGTGAAAGGCAGATGTATTCCAATGTTTTATTTTTCAAACCTCTTTTCTTGTGCTTGTAATCTTAATCAGTTGTCTGTTCTTTTTCCATGTATTACGTACTAGCTAGGGAGGCATTGTGTATAAATTATTGTTATCATAAAAGTATTATTATTTTATAGATTAGATTCTTTTATTGATAAATATCTTAAAGTATCATATATTGATCCAAATACATTACACAAATTGAAGTATCATTGGATCATTTACCTAAACTAGTATGCAAGTTGATGTACTTTGACATTGTTTTGAGATTGCAGATAAAATAGTATTCATTTTCCATTTTGATGTTGGCTTGAGAGCTGATATATTATACATTGTCCATTCTTGATCTCATCTCCCAATGAAAATCTTTTCAGGCTGACAGTGGTAAACTTGGGGATTCTGACTCATCTGTTTTGAGGTCTAGTGAAGAGGAAATTGATGATGATGGCTTCTTGGGGCGTGTTCCAGATTCATCCTGGACAGTTCCTCAAATCCCTTCCCCTCCTACGGCTTCCGGATTACACTGCCCGGAACTCCGGCGATATACATCTGACAATGCTATGTTTGTTCCTGACATATGCTTTTCCGGCGAGCGGAGGCAGCCTCGCCGTGTTCTTCATCATTCTATTCATTCAAAACGGCGGAGGAACCTATAA