Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13949 LG3 40896983 40901587 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 40897013 missense_variant p.Ala11Ser
G/C 40897083 missense_variant p.Arg34Pro
G/C 40897097 missense_variant p.Ala39Pro
C/G 40897198 missense_variant p.Asn72Lys
A/G 40897233 missense_variant p.Tyr84Cys
G/A 40897352 missense_variant p.Val124Ile
A/G 40897358 missense_variant p.Ser126Gly
C/G 40897366 missense_variant p.Asp128Glu
A/T 40897404 missense_variant p.Asn141Ile
C/T 40897412 missense_variant p.Pro144Ser
T/G 40897680 missense_variant p.Val233Gly
A/C 40897752 missense_variant p.Tyr257Ser
C/A 40897853 intron_variant
G/C 40898064 intron_variant
T/C 40898131 intron_variant
C/T 40898165 intron_variant
T/C 40898272 intron_variant
T/A 40898274 intron_variant
A/G 40898332 intron_variant
A/G 40898648 missense_variant p.Asn301Asp
T/C 40898784 intron_variant
T/C 40898807 intron_variant
G/A 40899134 intron_variant
T/A 40899135 intron_variant
T/C 40899248 intron_variant
T/C 40899350 intron_variant
G/A 40900140 intron_variant
T/A 40900257 intron_variant
C/T 40900258 intron_variant
C/G 40900313 intron_variant
G/A 40900385 intron_variant
G/A 40900628 intron_variant
C/T 40900629 intron_variant
C/T 40900669 intron_variant
C/T 40900707 intron_variant
G/C,* 40900722 intron_variant
T/C 40900733 intron_variant
T/C 40900781 intron_variant
G/C 40900812 intron_variant
A/C 40900824 intron_variant
G/A 40900825 intron_variant
C/T 40900837 intron_variant
C/A 40900869 intron_variant
G/A 40900888 intron_variant
G/C 40900898 intron_variant
C/T 40900918 intron_variant
A/G 40900949 intron_variant
A/G 40901000 intron_variant
C/T 40901041 intron_variant
C/T 40901061 intron_variant
A/G 40901063 intron_variant
G/A 40901071 intron_variant
C/T 40901093 intron_variant
C/T 40901099 intron_variant
T/A 40901125 intron_variant
T/C 40901127 intron_variant
A/C 40901129 intron_variant
T/C 40901147 intron_variant
G/A 40901149 intron_variant
T/C 40901156 intron_variant
C/T 40901195 intron_variant
T/A 40901200 intron_variant
G/T 40901208 intron_variant
G/A 40901212 intron_variant
G/A 40901217 intron_variant
C/T 40901218 intron_variant
C/T 40901219 intron_variant
G/A 40901220 intron_variant
A/G 40901236 intron_variant
C/T 40901270 intron_variant
G/A 40901281 intron_variant
T/C 40901285 intron_variant
T/C 40901333 intron_variant
C/T 40901339 intron_variant
T/C 40901340 intron_variant
A/G 40901341 intron_variant
A/T,C 40901345 intron_variant
A/G 40901356 intron_variant
A/G 40901362 intron_variant
G/A 40901375 intron_variant
T/A 40901386 splice_region_variant&intron_variant
A/G 40901444 missense_variant p.Thr416Ala
G/A 40901468 missense_variant p.Ala424Thr
G/A 40901476 synonymous_variant p.Ser426Ser
T/C 40901493 missense_variant p.Leu432Pro
A/G 40901507 missense_variant p.Thr437Ala
G/T 40901512 synonymous_variant p.Thr438Thr
C/T 40901550 missense_variant p.Thr451Ile
A/C 40901557 synonymous_variant p.Ser453Ser
T/C 40901574 missense_variant p.Leu459Ser
A/G 40901587 splice_region_variant&stop_retained_variant p.Ter463Ter

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13949.1
MVVLSSFWCSAQSVMACVAIIIVLFQQTHGAQDRPLCAASSCGKIRNITYPFRLKGDSPGCGLPRYELDCVNNVTVFTLFSGKYHVQNIDYETFKIQLTDAGVVEDTACSIPRYFMFSQNFTYVGSSDNYATDPLTIWNGNGLPDTPPSIAFLNCTDPVTDDPRYVEVNGMLCDSRGHVYAVLHSSEFKMRDIKVGCHLIVATFANWNNGTNVSYVDIHEWLHDGFWLSWALVKCIDQCGKGVACSINQTTNQIGCYQNYCHVMQFDFGEGKCGIQHHIFEYVVGIPIYIARYFEFAIMGLIYRITRLHYFSKWQVEGDLILVAPILIFVAARYGYREIKKMSRDFKVKLGEGGFGSVYKGKLQSGPEIAIKMLKKTKADGEEFINEVASIGRIHHVNVGFCLLPLKSKRVSSSSSTTPDRQAQIAKSHQIGELSVVATTVLIVKSSPRVATTISSLNGMLSPP*


CDS Sequence:
>Vu_13949.1
ATGGTGGTCTTATCTTCCTTTTGGTGTTCTGCACAATCAGTGATGGCCTGTGTGGCTATCATTATTGTGCTATTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTATGTGCTGCTTCTTCGTGTGGAAAAATTCGCAACATAACTTACCCTTTCCGACTCAAAGGCGATTCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAACAATGTGACCGTGTTCACCTTGTTTTCAGGGAAATACCATGTGCAGAATATCGATTACGAGACATTCAAGATCCAATTGACTGATGCAGGTGTTGTGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATGTTTTCACAGAACTTCACTTACGTTGGTAGTTCTGACAATTATGCGACTGATCCGCTAACTATCTGGAATGGGAATGGGCTTCCTGATACTCCTCCGTCTATAGCGTTTCTAAACTGTACTGATCCAGTAACCGATGATCCTCGATACGTGGAAGTGAATGGCATGCTTTGTGATTCTAGAGGTCATGTCTATGCTGTTCTTCATTCCAGTGAATTCAAAATGAGGGACATCAAGGTTGGGTGCCATTTAATAGTTGCTACCTTTGCAAACTGGAACAATGGCACCAACGTTTCGTATGTTGATATCCACGAGTGGCTGCATGATGGGTTTTGGTTGTCTTGGGCACTAGTTAAATGTATAGACCAATGTGGAAAGGGTGTGGCATGCTCCATCAATCAAACTACGAATCAAATCGGATGTTATCAGAACTATTGCCATGTTATGCAGTTTGACTTTGGAGAAGGAAAGTGCGGCATTCAGCACCATATTTTTGAATACGTAGTTGGAATTCCTATCTATATAGCACGTTATTTTGAATTCGCCATAATGGGACTAATCTATAGAATAACACGTCTACATTACTTTTCGAAATGGCAAGTGGAAGGAGATCTCATTTTGGTAGCCCCTATTCTAATATTTGTGGCAGCCAGGTACGGATATAGAGAAATTAAGAAAATGAGCAGAGATTTCAAAGTTAAATTGGGTGAAGGAGGTTTTGGATCTGTATACAAAGGAAAACTTCAAAGTGGACCAGAAATAGCCATAAAGATGTTGAAAAAAACGAAAGCTGATGGAGAAGAGTTCATTAATGAAGTGGCTAGTATTGGAAGAATACATCATGTAAATGTGGGTTTCTGCCTCCTCCCCCTAAAATCAAAGAGAGTATCTTCATCTTCATCCACCACTCCAGATCGCCAAGCCCAAATCGCCAAGTCGCACCAGATCGGTGAGCTCTCCGTCGTCGCCACCACGGTGCTTATCGTCAAATCCTCACCGCGAGTCGCAACTACCATCTCATCCCTTAATGGAATGTTGTCGCCGCCCTAA


Promoter Sequence:
>Vu_13949::LG3:40894983-40896983(+)
GATTGAATCGTCACAAACACAAAAATGGGAAGAAACTACGCCAATGAAGAACGATGGAGAACGTTTTTTAAAACAAAACCTAAATGGGGATTTCGATTGACAACCGAAACAAGAAAGAAACCCCAATTTACATTTTTTCACTTTTACTCTCAATCAGTATACAATTTTCTTTTAAAAAAGATGACTTGGACCGTGTCAAACGAGTGTAAGTGTCACGTAGGGGTGTCAAGCTATTAGTACTCTTAGATTCCATCAGTTGCATACTAAAAATTTCTGCTATAGAATCAATACGAACCATTCTTCTAATATGATGAAGATGGGCATGTAAAGGAATATGGCTAACGTCACCCAGCAAAGTAATAAACTGGCCCTGATGGAGAAACTTTAATTGCAAAGATTCATAATTTGCTATGTGTGGACCAATAGTCTTCAACCAGCTTGCCCCCAAAATTAAATCAGCACCAGATATGGGAAGCACATAAACTGGCAGGTGGAAAGTACTTCCTTGCACGTGAATAAGTAAATCTTTAATCAAACCCTCTACAGCCATATAATTCCCATTACCCACCTTGACTCGAAATGCATGAGCAGGTTCAACATTCAACTTTTAAAAAATCCTAAATGGACTCAGTATGCTCCTTATTCACCAACAATTCATTGTCCAACTCATTCTCCTCACCATGCAACATCAGCATTTGCCTGTTGGGGCATTTATGATTAAAAGTAAACTTATCATCACAAAAGTAGCAGAAGCCTTTTTCCCTTCTCAATTGCATTTTAGCCGGAGATATTTTCTTTATAGGAAGGGCTCGAAGAGGCTTAGCAAGAGGGGTAGGCAACAATGGAGGTAAGGAATCGTTAGAGGAATTTTTCTTCACCGGAACAACAGTACTGCTACTCGAAGCTATAGAAGAATACTTCTGAGTATAATTTGAACTCCTTGGGTACCCCACTGGTGTATATTTTTCCTCATATAATAAAGTCATAGGACATTGCACAATCACATCTCTACGAATATCCTTATTCAAGCCACTTATAAAGCATTGTAATAAAGCCTCAGCCGAAAGTCCCTTAGATCTATTAGCCAATGCCATAAATCGGAGATAATACTCAGAAACACTACCAAATTGTTATAGTTTAAACAACTCCTATGTTGGGCAATCAAACAAAGACAGACCCAACTGAGATTCAAGTGTTGTAGTAAGCTCAGTCCAAGAGCAAATCGCATTAAGCCTTTGCAACATTTGAAACCATGGGACCACATCTTTCTCAAAATGAATAGCTGCAATATCCACAACAAATCATCATAACTTGCTTTCTACATCTAGTCCAAACGGCCAGTAGTGGGCTTCTGCAACTGAGTCACAACTTGTTGTTGGGCAATATCGCGGTCATGTTCTGCTTGATCGCGTAGTTCCAGCAGAATCATCAATCGCGTAAGTTCTTCCCCTCGATTCATAACTTGATTTTGCAAGTCCTATAGAATGCTATTTTCAGCCGTTTGACGTCAATGAAAACGCCAATGAAACAGTGTATATATAATCTGTTATATTCTTTCTCCAAATAAACTCAATGTTCTTTCAACAAACACATAGTATGCAATTCTATACTGTAAATAACTAAAGCTGTAAAAATTGTTCTCCAGCACCGAAGAAAAAAAAACGGAATCTCCAGACCAAATCACGTCCTTCCTGTCACACCTAAAACATAGGAAGAAAATCAGAGAGGGTTGTTCATACCAATATCATGCCACCTCATTCCTCAAAATCTCGTAAATAAATATTCTTCTGCCCAATACGTTTTGTTCTTCTCATTCCAAGGGTTTGTTGGTCTTTTTATTTGAAATATGGAGGTGCAGGAAGCAAGTACAGAGGTATATTTAGACGAAGCATCCCATAATCACTTTGAAAATTCAACCAGTGATCGTACGTTATTAGTTGATTTTGGTGAATTATTTAACTGTGATATGTCCCATTTACACGACCAGAAGAGGTCAACAA


Gene Sequence:
>Vu_13949(+)
ATGGTGGTCTTATCTTCCTTTTGGTGTTCTGCACAATCAGTGATGGCCTGTGTGGCTATCATTATTGTGCTATTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTATGTGCTGCTTCTTCGTGTGGAAAAATTCGCAACATAACTTACCCTTTCCGACTCAAAGGCGATTCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAACAATGTGACCGTGTTCACCTTGTTTTCAGGGAAATACCATGTGCAGAATATCGATTACGAGACATTCAAGATCCAATTGACTGATGCAGGTGTTGTGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATGTTTTCACAGAACTTCACTTACGTTGGTAGTTCTGACAATTATGCGACTGATCCGCTAACTATCTGGAATGGGAATGGGCTTCCTGATACTCCTCCGTCTATAGCGTTTCTAAACTGTACTGATCCAGTAACCGATGATCCTCGATACGTGGAAGTGAATGGCATGCTTTGTGATTCTAGAGGTCATGTCTATGCTGTTCTTCATTCCAGTGAATTCAAAATGAGGGACATCAAGGTTGGGTGCCATTTAATAGTTGCTACCTTTGCAAACTGGAACAATGGCACCAACGTTTCGTATGTTGATATCCACGAGTGGCTGCATGATGGGTTTTGGTTGTCTTGGGCACTAGTTAAATGTATAGACCAATGTGGAAAGGGTGTGGCATGCTCCATCAATCAAACTACGAATCAAATCGGATGTTATCAGAACTATTGCCATGTTATGCAGTTTGACTTTGGAGAAGGAAAGTGCGGTGAGAAAAAATTCTTCTACCGCAATTTTTCTTTCCCTTTTATCGAGTACCAATTTTAGTGAAACGTGTTGTACAAACAAATAGCTTTAATCTTTACAATATATGCTAATGTTTTCTTTTCCTGTTCTAGGCATTCAGCACCATATTTTTGAATACGTAGTTGGAATTCCTATCTATATAGCACGTAAGAGCTTTCTCCCATATCTTTGTCCTTTCAATTACTAGTGTACTGACTACTTAAAGTTAATCTATATTTTGACTGATTAGTAAGCTGTACAATTTCTGTACGATTCATTCTGATAACCTGCAAGTTGTGCATCAAAGTTGATAAATTTTGAAACGCATATCGTTCTGTACTCTAACTCAACAAGTAGTTGACAGGAGTTTCTAAACAAAAAGCCTTAAAGGGATGTTCAATGGGATTTCCGTTATACGTTCACGATATTCTCCAAATTTATTTCAACATTAATCTAGATGTATCTGTTTGAAAAGGGTGTTTTGGGAAAGGACCAGGAAATGGATCCCTCAAAACATCATACAAATGACAAACCAAGAAGTTATTTGAATGCATTTCATGACGCTAGAAATGCATAGGATGGATCCTTAGGATGAACGTTCTCTGAAAAAAACGTATGTTTATTTATAATATGTATCTAAAGTATCCTTAAAATACTGAGTGTTCTTTTGTTTTGATGCTATTATATTGCGTTATTTTGCAGGTTATTTTGAATTCGCCATAATGGGTAATGCCTTGTCAACTGATTTCATATTTGAATAAACTTACTGATTACACTAACCATGGTTTATTGCCTTACTCATTCCATGAAATTTATATGCACAGGACTAATCTATAGAATAACACGTCTACATTACTTTTCGAAATGGCAAGTGGAAGGAGATCTCATTTTGGTAGCCCCTATTCTAATATTTGTGGCAGCCAGGTTTCTATTTGGATTCGCACTTTTGCTTGCACTATTTATCTATACGTGGCGACGTAGGCATTATTCAATGTATGAAAACATTGAAACGTTTTTGCTACACAATAATCTAAATCCTATTAGGTACGGATATAGAGAAATTAAGAAAATGAGCAGAGATTTCAAAGTTAAATTGGGTGAAGGAGGTTTTGGATCTGTATACAAAGGAAAACTTCAAAGTGGACCAGAAATAGCCATAAAGATGTTGAAAAAAACGAAAGCTGATGGAGAAGAGTTCATTAATGAAGTGGCTAGTATTGGAAGAATACATCATGTAAATGTGGTACATCTTATTGGATATTGTGCTGAAGGAGAAAATCGTGCTCTGGTTTATGAATACATGACAAATGGTTCGTTGGATAAACACATCTTCTCCAAAAAGGAAAGTGTCCCTTTAAGTCATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTTCATCAAGGCTGTGATGTGCAAATTCTACATTTTGACATTAAGCCTCATAATATTCTTCTGGATGATAACTTCACTCCAAAGGTTTCAGATTTCGGACTTGCAAAGTTGTATCCTGTTAAAGATACGTCTATTGCTTTAACTAAAGCTAGAGGAACTTTGGGTTACATGGCTCCAGAATTATTCTACAATAATATTGGTGGAGTATCAAATAAGGCTGATGTATATAGTTTTGGGATGCTTTTGATGGAAATAGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAAGATTCAAGCCAACAGTACTTTCCCTTTTGGATCTATGATCAAATTAAAGATGAAAAAGATACTCAAATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAGAATGTATGTAGTTGCGCTTTGGTGTATACAATTGAATCCAAATGACCGTCCTTCAATGAAGAGAGTTGTGGATATGTTGGAAGAAAGAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAATTGAACATGATCGCGGAGAGGACTCAAACCAAGCATCATGGAGTGGTTCAACCAGTTCTAGCAATAATCTTGGCAAAACTAACACTAATCATCCATGGCAGAGCGATGCTTAACGGACAAAGGTTAACATTTCATATTAAGTATGCAGAGGATCGCAAAAAAATTGCATAGAAAGGCTCCCAAGAGGTTCCAGTGTTGGGAAATCCGGTTTTAGCATTTTCATCTGCTTTTATGTGAAATACTGGCTTTCTTCAATATCTCAACATAAATTGTGACAACTGGTTTCTCTATGTTTAGGAGAATGGTGGACCTTTATCCTATTGGCATAAATATTTAATCCGTCTTTGTAGTAGTATAAAAAGAACATGGTTGTAAATCCGTCTTTGTAGTAGTATAAAAAGAACATTTGTAGTAATATAAAAATATGCAATATTGTTTTAAAATTGGTTACTTAATAATTAAAACATTTTTATTTGAATTTATTGTGTTCTGTATCAATTTTACTATCCATGTATAAGTTTAGTTGAAACATCCATTGCTTAATCTAGATGACAGAGAAATCAGATTCATTAAGTCACTATTAGGCGTATTTACTTATGATATGAAAAAGAAAAACGTCTCCATTATTACGATAAAACTAAGTTAAAGGACTAAAAAACAAATTTAAAAAGAATAAGTTAAAAGAGTTCAAACAAAAGTTTATAATTTATTAGGTATTTATTCACAAAATAATTTAGTAAATATTAAAAATAAAAATAAAAGTATATAAGAAACTTAAAATTTATTTACAACTATTATTGCATTTTAGATTTCCTAATTTAATTGAGTACTTAAAGTTTTAGGTCTATTATAGATATATGCATTATACCATAACTTATTCTAAACCTAAATAGTATAGAACTCATGGCTTTAAAGAGCACTAGTAAAAAAAGTAGATTCTAATGCGCCATATAGGCTTCGGTTATGCAAAACCCGAAGCGTAAAAGGTTATATACCTCGGTTACACCTTGACTTGAGGCAGAACGGTGATATTGCCTCAGTTAGAAGAAGACCCGAGACCTATACCTCCACTTTTTGTCTGACAACTTTTTGAAAAGGCCCTATTGCCTCGGGTTGTCAGGCAACCGCTGCGTATACTCCTGTGCAAGTCAGGCTTTTCGCCTATATACATGATGCACCTACTAGGCACCTGCATTTCAGCACTTTATACCTCGGGTTTGGCTCTTAACCGATGCCATATTGTGCTCTTCACTCCACTTCTCCGATCTTAACCTACACACGCTTCATTTGCACAACCCAACAGCTTCTTCTTTCTTCCCCTCTGCGGTTTCGTCCACCACTGCCACTCCTTGCTAGTGTTATCCCATTCTTCCTCTCCTTGTGCTGCTAGTGGTCTCGCTTGCCTCCTGCTCGTTGTCGTTCTTGGCGTCGTGCCTCCTGCCTGCGCCGCCGCGCCATTGGTGCCCCACCGCTGCTGCCTGCCATGCTTCCTCTAACGACGCCGCTTATGTCGCTGTTGTAGCCTCCGTCGCTATAGCCTCCGTCGCTATAGCCTCCGCCACTGTTGCCTCTATCGATGTTGCTTCCACCACTACCAAGCCCAAATGGCCAAATCTGTTAGGGTTTCTGCCTCCTCCCCCTAAAATCAAAGAGAGTATCTTCATCTTCATCCACCACTCCAGATCGCCAAGCCCAAATCGCCAAGTCGCACCAGATCGGTGAGCTCTCCGTCGTCGCCACCACGGTGCTTATCGTCAAATCCTCACCGCGAGTCGCAACTACCATCTCATCCCTTAATGGAATGTTGTCGCCGCCCTAA