Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13948 LG3 40869931 40873291 rust resistance kinase Lr10-like isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 40870002 synonymous_variant p.Leu24Leu
G/T 40870008 missense_variant p.Gln26His
G/A 40870112 missense_variant p.Cys61Tyr
G/C 40870237 missense_variant p.Val103Leu
G/A 40870300 missense_variant p.Val124Ile
G/A 40870313 missense_variant p.Gly128Glu
T/C 40870461 synonymous_variant p.Gly177Gly
C/A 40870477 missense_variant p.Leu183Ile
C/G 40870480 missense_variant p.His184Asp
T/A 40870488 missense_variant p.Ser186Arg
G/C 40870489 missense_variant p.Glu187Gln
A/G 40870495 missense_variant p.Lys189Glu
C/G 40870544 missense_variant p.Ala205Gly
C/T 40870554 synonymous_variant p.Asn208Asn
C/A 40870565 missense_variant p.Thr212Asn
C/T 40870566 synonymous_variant p.Thr212Thr
C/T 40870578 synonymous_variant p.Asn216Asn
A/T 40870603 missense_variant p.Arg225Trp
G/T 40870633 missense_variant p.Ala235Ser
T/A 40870637 missense_variant p.Leu236Gln
G/C 40870639 missense_variant p.Val237Leu
T/C 40870647 synonymous_variant p.Cys239Cys
A/G 40870681 missense_variant p.Thr251Ala
C/T 40870682 missense_variant p.Thr251Ile
T/C 40870708 missense_variant p.Cys260Arg
T/C 40870865 intron_variant
G/A 40870889 synonymous_variant p.Ala281Ala
C/A 40870890 missense_variant p.Pro282Thr
T/A 40871538 intron_variant
C/T 40871540 intron_variant
C/T 40871542 intron_variant
T/A 40871561 intron_variant
A/T 40871587 intron_variant
A/T 40871646 stop_gained p.Arg307*
G/A,* 40871987 missense_variant p.Glu380Lys
T/C 40872028 synonymous_variant p.Ile393Ile
C/T 40872032 synonymous_variant p.Leu395Leu
G/A 40872047 missense_variant p.Val400Met
C/T 40872052 synonymous_variant p.Leu401Leu
T/A 40872068 stop_lost p.Ter407Argext*?
G/C 40872077 splice_donor_variant&intron_variant
G/A 40872081 splice_region_variant&intron_variant
C/T 40872091 intron_variant
A/G 40872107 intron_variant
G/A 40872109 intron_variant
G/A 40872115 intron_variant
C/T 40872121 intron_variant
G/A 40872899 intron_variant
G/A 40873019 intron_variant
G/A 40873176 intron_variant
G/C 40873177 intron_variant
A/C 40873179 intron_variant
A/C 40873181 intron_variant
A/C 40873197 intron_variant
G/C 40873198 intron_variant
C/T 40873218 intron_variant
C/T 40873231 missense_variant&splice_region_variant p.Leu410Phe
A/G 40873239 synonymous_variant p.Thr412Thr
A/G 40873263 stop_lost p.Ter420Trpext*?
A/C 40873269 synonymous_variant p.Pro422Pro
A/G 40873271 missense_variant p.Asp423Gly
T/A 40873272 missense_variant p.Asp423Glu
G/A 40873274 missense_variant p.Cys424Tyr
G/T 40873277 stop_lost p.Ter425Leuext*?
A/G 40873283 missense_variant p.His427Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13948.1
MVFLSSFWCSAQSVMASVAIIIVLFQQTHGAQDRPLCAPSSCGKIRNITYPFRLKGDSPGCGLPRYELDCVKNVTVFTLFSGKYHVQNIDYETFKIQLTDAGVVEDTACSIPRYFMFSQNFTYVGGSGNYATDPLTIWNGNGVSDTPPSIAFLNCTDPVTDDPRYVEVNGMLCDSRGHVYAVLHSSEFKMRDIKVGCHLIVATFANWNNGWTNGTNVSYVDIHERLHNGFWLSWALVKCIDQCGKGVGCFTNETTNQIRCDDNNYCEIMWVNFGKGKCGIQRQIFGYVVGIPLYIASYFEFAIMVEGDLILVAPILIFVAARYGYREIKKMSRDFKVKLGEGGFGSVYKGKLQSGPEIAIKMLKKSKADGEEFINEVASIGRIHHVNVVHLIGYCAEGEKRALVYEYMTNGFEHEQSFPSLDLQIADNTV*


CDS Sequence:
>Vu_13948.1
ATGGTGTTCTTATCTTCCTTTTGGTGTTCTGCACAATCGGTGATGGCCAGTGTGGCTATCATTATTGTGCTATTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTATGTGCTCCTTCTTCGTGTGGAAAAATTCGCAACATAACTTACCCTTTCCGACTCAAAGGCGATTCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTGTTCACCTTGTTTTCAGGGAAATACCATGTGCAGAATATCGATTACGAGACATTCAAGATCCAATTGACTGATGCAGGTGTTGTGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATGTTTTCGCAGAACTTCACTTACGTTGGTGGTTCTGGGAATTATGCGACTGATCCGCTAACTATCTGGAATGGGAATGGGGTTTCTGATACTCCTCCGTCTATAGCGTTTCTAAACTGTACTGATCCAGTAACCGATGATCCTCGATACGTGGAAGTGAATGGCATGCTTTGTGATTCTAGAGGTCATGTCTATGCTGTTCTTCATTCCAGTGAATTCAAAATGAGGGACATCAAGGTTGGGTGCCATTTAATAGTTGCTACCTTTGCAAACTGGAACAATGGCTGGACCAATGGCACCAACGTTTCGTATGTTGATATCCACGAGAGGCTGCATAATGGGTTTTGGTTGTCTTGGGCACTAGTTAAATGTATAGATCAATGTGGAAAGGGTGTGGGATGCTTCACCAATGAAACTACAAATCAAATCCGATGTGATGATAATAACTATTGCGAAATTATGTGGGTTAACTTTGGAAAAGGAAAGTGCGGCATTCAGCGCCAGATTTTTGGATACGTAGTTGGAATTCCTCTCTATATAGCAAGTTATTTTGAATTCGCCATAATGGTGGAAGGAGATCTCATTTTGGTAGCCCCTATTCTAATATTTGTGGCAGCCAGGTACGGATATAGAGAAATTAAGAAAATGAGCAGAGATTTCAAAGTTAAATTGGGTGAAGGAGGTTTTGGATCTGTATACAAAGGAAAACTTCAAAGTGGGCCAGAAATAGCCATAAAGATGTTGAAAAAATCGAAAGCTGATGGAGAAGAGTTCATTAATGAAGTGGCTAGTATTGGAAGAATACATCATGTAAATGTGGTACATCTTATTGGATATTGTGCTGAAGGAGAAAAGCGTGCTCTGGTTTATGAATACATGACAAATGGCTTTGAACATGAGCAATCTTTCCCCAGTCTTGACCTCCAGATTGCTGACAACACTGTTTGA


Promoter Sequence:
>Vu_13948::LG3:40867931-40869931(+)
AAACTCACTTCTGTTAGATTGTTGCTTGCTCTCGCTGCCACAAAGAATTGGTTTCTACATCAACTTGATGTAGATAATGCTTTCCTACATGGGGACCTAAATGAAGATGTCTACATGGATCCTCCACCTGGCTTGAATACTAACACACAGGGACAGGTCTGTAAGCTCACAAAATCACTGTATGGACTGAAACAGGCCAGCAGACAATGGTTTGACAAACTCTCCACTTTTCTTATTTCTGCAAATTATACTCAGTCCAAATCTGATCACTCCCTATTCATAAAGAAAACCCCCACTGATTTCACAGTCTTACTTGTGTATGTTGATGATATTGTGTTAGCAGGAAATTCCATGAATGAAATAACTAATATGAAGGCTCTCTTACATCAACAATTTCAAATAAAAGACCTTGGGGAACTTAAATATTTTCTGGGTTTTGAGGTTGCAAGATCTAAGAAAGGGATACATCTTTGTCAGAGAAAGTATGCTCTTGATATCCTTAAAGAAATAGGAATGCTTGGAAGCAAACCTTGCACTACACCTTTTCTTAGTAGCACTAATTCCCTATACAAAACAGAGAACTATATGGATGACCCCAGTGCTTATCGTAGACTAATAGGAAAACTTTTCTATCTCACTAATACTAGACCTGATTTATGTTTCACTGTTAATCTTTTAAGCCAGTTTATGCAGGAGCCCACTAACTACCACTATCAAGCCTTACAACATATCGTCAGATATGTCAAGTCCAGCCCTTCTGAAGGACTCTTCTTTGCTGCTGATTCTGACATACAGATCAAAGGATTCAGTGACTCGGACTGGGCTACTTGTCCTAACACGAGGAGATCCACTACTGGCTATTGCATTTTCTTAGGAAAATCCCTAATTTCATGGAGGTCGAAGAAACAGAGCACTGTTTCTAGATCCTCTACTGAAGCAGAGTATCGTGCCCTGGCTGCCACTGTCTGTGAGATGCAATGGCTTCATTACCTTCTTGAAGATCTCCAAGTTCAACCCACTGCTACTGCCGTCCTCTACTGTGACAACGATTCTGCAAGACATATTGCTCACAACCAAAGCTTCCACGAGCGGACCAAACATATCGAGTTGGACTGTCATGTTGTACGTGAAAAGGTTCAAGCCAAATTTCTAAGACTTCTTCCCATTAGATCGGAGGAACAACTTGCCGATGTTTTCACCAAGTTTCCTCACCGCACTCACTTCAAATCCATCATCCCCAAGCTTGGATTAGTGAATATCCACCATCCAGCTTGAAGGGAGGCTATTAATGTTTCTGTTTCATAGTTATTGCTCCTAAGAGCAACATTAAGTGTTTTAGGGTTGTTAGTTTTAGGCTTTTATGGTTCTGTTATGAGTTGTAACCAACTCCCTTTTCTGTTTCATGGAACCCTATATGAATAGGGATTCCAGCCCTTTTGTAAGATGATGAAGAGATCAATACACATATACAGAATACAATAAACTTTTACTTACCTCCGATTACCAACTCTTCTTTTCTTCTTCTTTAATCTTCTTCTTCTCTCCCAACGGACAGCCATTGGAGCAGCTCCATCATCATCTCGCTTGTGCACTGCATCAGAGAAGCCTTTTGCTTTTTCTTTCCTTGCGTGCACATCCAGTTTCAGACACGCAATGCTTTCTGACCAAAGGAAGCTTCTAGGAGAAGCTGATGTTTTCAGTATTGAAGGCCAGAGAGTATTGGGCCTCAGCCTTTCTTGATTTGGGCCTGTTTTAATACATACCAATATCATGCCACCTCATTCCTCAAAATCTCGTAAATAAATATTCTTCTCAATTCCAAGGGTTTGTTGGTCTTTTTATTTGAAATATGGAGGTGCAGGAAGCAAGTACAGAGGTACAAGTAGAAGCATCCCATAATCACTTTGAAAGTTCAACGAGTGGTCGTACGTTATCAGTTGATTTTGGTGAATTATTTAACTATGATATGTCCCATTTACACGACCAGAAGAGGTCAACAA


Gene Sequence:
>Vu_13948(+)
ATGGTGTTCTTATCTTCCTTTTGGTGTTCTGCACAATCGGTGATGGCCAGTGTGGCTATCATTATTGTGCTATTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTATGTGCTCCTTCTTCGTGTGGAAAAATTCGCAACATAACTTACCCTTTCCGACTCAAAGGCGATTCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTGTTCACCTTGTTTTCAGGGAAATACCATGTGCAGAATATCGATTACGAGACATTCAAGATCCAATTGACTGATGCAGGTGTTGTGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATGTTTTCGCAGAACTTCACTTACGTTGGTGGTTCTGGGAATTATGCGACTGATCCGCTAACTATCTGGAATGGGAATGGGGTTTCTGATACTCCTCCGTCTATAGCGTTTCTAAACTGTACTGATCCAGTAACCGATGATCCTCGATACGTGGAAGTGAATGGCATGCTTTGTGATTCTAGAGGTCATGTCTATGCTGTTCTTCATTCCAGTGAATTCAAAATGAGGGACATCAAGGTTGGGTGCCATTTAATAGTTGCTACCTTTGCAAACTGGAACAATGGCTGGACCAATGGCACCAACGTTTCGTATGTTGATATCCACGAGAGGCTGCATAATGGGTTTTGGTTGTCTTGGGCACTAGTTAAATGTATAGATCAATGTGGAAAGGGTGTGGGATGCTTCACCAATGAAACTACAAATCAAATCCGATGTGATGATAATAACTATTGCGAAATTATGTGGGTTAACTTTGGAAAAGGAAAGTGCGGTGAGAAAAAATTCTTCTACCGCAATTTTTCTGTCCCTTTTATTGAAACGTGTTGTACAAACAAATAGCTTTAATCTTTACAATATATGTTAATGTTTTTTTTTTCTGTTCTAGGCATTCAGCGCCAGATTTTTGGATACGTAGTTGGAATTCCTCTCTATATAGCAAGTAAGAGCTTTCTCCCATATCTTTGTCCTTTCAATTACTAGTGTACTGACTACTTAAAGTTAATCTATATTTTGACTCATTAGTAAGCTGTACAATTTCTGTACGATTCATTCTGATAACCTGCAAGTTGTGCATCAAAGTTGATAAATTTTGAAACGCATATCGTTCTGTACTCTAACTCAACAAGTAGTTGACAGGAGTTTCTAAACAAAAAGCCTTAAAGGGATGTTCAATGGGATTTCCATTATACGTTCACGATATTCTCCAAATTTATTTCAACATTAATCTAGATGTATCTGTTTGAAAAGGGTGTTTTGGGAAAGGACCAGGAAATGGATCCCTCAAAACATCATACAAATCACAAACCAAGAAGTTATTTGAATGCATTTCATGACGCTAGAAATGCATAGGATGGATCCTTAGGATGAACGTTCTCTGAAAAAAACGTATGTTTATTTATAATATGTATCTAAAGTATCCTTAAAATACTGAGTGTTCTTTTGTTTTGATGCTATTATATTGCGTTATTTTGCAGGTTATTTTGAATTCGCCATAATGGGTAATGCCTTGTCAACTGATTTCATATTTGAATAAACTTGCTGATTACACTAACCATGGTTTATTGCCTTACTCATTCCATGAAATTTATATGCACAAGACTAATCTATAGAATAACACGTTTACATTACTTTTCGAAATGGCAAGTGGAAGGAGATCTCATTTTGGTAGCCCCTATTCTAATATTTGTGGCAGCCAGGTTTCTATTTGGATTCGCACTTTTGCTTGCACTATTTATCCATACGTGGCGACGTAGGCATTGCTCAATGTATGAAAACATTGAAACGTTTTTGCTACACAATAATCTAAATCCTATTAGGTACGGATATAGAGAAATTAAGAAAATGAGCAGAGATTTCAAAGTTAAATTGGGTGAAGGAGGTTTTGGATCTGTATACAAAGGAAAACTTCAAAGTGGGCCAGAAATAGCCATAAAGATGTTGAAAAAATCGAAAGCTGATGGAGAAGAGTTCATTAATGAAGTGGCTAGTATTGGAAGAATACATCATGTAAATGTGGTACATCTTATTGGATATTGTGCTGAAGGAGAAAAGCGTGCTCTGGTTTATGAATACATGACAAATGGTTCGTTGGATAAACACATCTTCTCCAAAGAGGAAAGTGTCCCTCTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTTCATCAAGGTTGTGATGTGCAAATTTTACATTTTGATATTAAGCCTCATAATATTCTTCTAGATAATAACTTTATTCCAAAGGTTTCAGATTTCGGACTTGCAAAGTTGTATCGTGTCAAAGATACATCTATTGCTTTAACTAAAGCTAGAGGAACTTTGGGTTACATGGCTCCAGAATTATTCTACAATAATATTGGTGGAGTATCAAATAAGGCTGATGTATATAGTTTTGGGATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATCTATGATCAAATTAAAGATGAAAAAGATACTCAAATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAGAATGTATGTAGTTGCGCTTTGGTGTATACAATTGAATCCAAATGACCGTCCTTCAATGAAGAGAGTTGTGGATATGTTGGAAGAAAGAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAATTGAACATGATCGCGGAGACGACTCAAACCAAGCATCATGGAGTGGTTCAACCAGTTCTAGCAATAATCTTGGGAAAACTAACACTAATCATCCATGACAGAGCGATGCTGAACGGACAAAGGTTAACATTTCATATTAAGTATGCAGAGGATCGCAAAAAAATTGCTTAGAAAGGCTCCCAAGAGGTTCCAGTGTTGGGAAATCCGGTTTTAGCATTTTCATCTGCTTTTATGTGAAATACTGGCTTTCTTCAATATCTCAACATAAATTGTGACAACTGGTTTCTCGATGTTTAGGAGAATGGTGGACCTTTATCCTATTGGCATAAATATTTAATCCGTCTTTGTAGTAGTATAAAAAGAACATTTTTTATTTTCTTGAAAATCAGTTCTCATGAAATATTGGAAAGGAAATTAAACAGAGAGATATTATGTCCACAATAAATTCCCAGATCAGTGTGGCACATGAAAACCCTTTGAGAGTTCCATAAATGATTATTTACAAAATAGACAGGCTTTGAACATGAGCAATCTTTCCCCAGTCTTGACCTCCAGATTGCTGACAACACTGTTTGA