Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13947 LG3 40846125 40850655 PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 40846354 missense_variant p.Cys77Phe
C/G 40846431 missense_variant p.Leu103Val
A/G 40846479 missense_variant p.Lys119Glu
A/C 40846500 missense_variant p.Asn126His
A/G 40846539 missense_variant p.Asn139Asp
C/T 40846542 missense_variant p.Arg140Trp
G/C 40846543 missense_variant p.Arg140Pro
G/A 40846545 missense_variant p.Asp141Asn
A/T 40846570 missense_variant p.Tyr149Phe
G/A 40846572 missense_variant p.Val150Ile
T/C 40846603 missense_variant p.Ile160Thr
T/G 40846677 missense_variant p.Tyr185Asp
T/A 40846686 missense_variant p.Tyr188Asn
G/A 40846718 synonymous_variant p.Gly198Gly
G/A 40846753 missense_variant p.Ser210Asn
T/G 40846762 missense_variant p.Leu213Trp
G/T 40846771 missense_variant p.Gly216Val
C/A 40846785 missense_variant p.Pro221Thr
T/A 40846815 missense_variant p.Trp231Arg
A/G 40846820 synonymous_variant p.Leu232Leu
G/T 40846845 missense_variant p.Ala241Ser
C/G 40846851 missense_variant p.Leu243Val
A/G 40846893 missense_variant p.Ile257Val
T/G 40846923 missense_variant p.Tyr267Asp
T/G 40846996 intron_variant
T/A 40847030 intron_variant
T/A 40847098 synonymous_variant p.Ala286Ala
C/A 40847099 missense_variant p.Pro287Thr
C/T 40847112 missense_variant p.Thr291Ile
C/G 40847115 missense_variant p.Pro292Arg
C/G 40847121 missense_variant p.Ser294Trp
A/T 40847179 intron_variant
T/C 40847189 intron_variant
C/T 40847371 intron_variant
A/G 40847386 intron_variant
G/T 40847388 intron_variant
A/T 40847411 intron_variant
T/C 40847626 intron_variant
A/G 40847680 stop_retained_variant p.Ter304Ter
G/A 40847784 intron_variant
G/A 40848250 missense_variant p.Val421Met
C/T 40848255 synonymous_variant p.Leu422Leu
T/A 40848271 stop_lost p.Ter428Argext*?
G/C 40848280 splice_donor_variant&intron_variant
G/A 40848284 splice_region_variant&intron_variant
C/T 40848294 intron_variant
A/G 40848310 intron_variant
G/A 40848312 intron_variant
A/G 40848315 intron_variant
G/A 40848318 intron_variant
T/C 40848330 intron_variant
T/A 40848342 intron_variant
T/C 40848355 intron_variant
C/T 40848366 intron_variant
G/A 40848371 intron_variant
G/A 40848390 intron_variant
C/T 40848392 intron_variant
G/T 40848394 intron_variant
T/G 40848398 intron_variant
C/T 40848411 intron_variant
T/C 40848422 intron_variant
G/A 40848425 intron_variant
T/A 40848442 intron_variant
A/T 40848443 intron_variant
A/G 40848447 intron_variant
G/T 40848465 intron_variant
G/A 40848478 intron_variant
C/T 40848484 intron_variant
T/C 40849048 intron_variant
T/C 40849307 intron_variant
T/C 40849378 intron_variant
A/G 40849459 intron_variant
A/T 40849545 intron_variant
T/C 40849828 intron_variant
G/A 40849841 intron_variant
T/C 40849845 intron_variant
A/G 40849920 intron_variant
C/T 40849934 intron_variant
A/T 40849967 intron_variant
C/T 40849987 intron_variant
G/A 40850010 intron_variant
G/A 40850012 intron_variant
T/A 40850018 intron_variant
C/T 40850039 intron_variant
T/C 40850047 intron_variant
C/T,* 40850053 intron_variant
C/T 40850062 intron_variant
T/C 40850082 intron_variant
A/C 40850092 intron_variant
G/A 40850102 intron_variant
A/T 40850109 intron_variant
T/C 40850111 intron_variant
C/T 40850154 intron_variant
C/T 40850174 intron_variant
T/C 40850179 intron_variant
G/A 40850205 intron_variant
G/A 40850237 intron_variant
T/C 40850245 intron_variant
T/C 40850260 intron_variant
G/A 40850262 intron_variant
T/C 40850269 intron_variant
C/T 40850281 intron_variant
G/C 40850283 intron_variant
C/T 40850287 intron_variant
C/T 40850298 intron_variant
G/A 40850309 intron_variant
T/A 40850313 intron_variant
G/T 40850314 intron_variant
G/T 40850321 intron_variant
G/A 40850325 intron_variant
G/A 40850330 intron_variant
A/G 40850333 intron_variant
C/T 40850337 intron_variant
C/T 40850350 intron_variant
C/T 40850353 intron_variant
G/A 40850362 intron_variant
C/T 40850363 intron_variant
C/T 40850383 intron_variant
T/C 40850395 intron_variant
T/C 40850398 intron_variant
C/T 40850407 intron_variant
T/C 40850410 intron_variant
C/T 40850416 intron_variant
C/T 40850422 intron_variant
C/T 40850428 intron_variant
A/G 40850430 intron_variant
C/T 40850432 intron_variant
A/G 40850453 intron_variant
T/C 40850463 intron_variant
C/T 40850472 intron_variant
C/T 40850476 intron_variant
G/A 40850536 missense_variant p.Arg436His
G/A 40850544 missense_variant p.Ala439Thr
G/A 40850555 synonymous_variant p.Arg442Arg
T/C 40850556 stop_lost p.Ter443Argext*?
G/A 40850557 stop_retained_variant p.Ter443Ter
C/T 40850564 synonymous_variant p.Leu445Leu
G/A 40850566 missense_variant p.Arg446His
C/T 40850574 missense_variant p.Arg449Cys
T/C 40850576 synonymous_variant p.Arg449Arg
A/G 40850578 missense_variant p.His450Arg
G/A 40850580 missense_variant p.Gly451Ser
G/A 40850587 missense_variant p.Cys453Tyr
T/C 40850602 missense_variant p.Ile458Thr
G/A 40850604 missense_variant p.Ala459Thr
T/C 40850644 missense_variant p.Val472Ala
T/C 40850645 synonymous_variant p.Val472Val
C/T 40850648 synonymous_variant p.Ala473Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13947.1
MVVLSSFWCSAQSVMASVAIIIVLFQQTHGAQDRPLCAPSSCGKIRNITYPFRLKGDSPGCGLPRYELDCVKNVTVCTLFSGKYHVQNIDYETFKIQLTDAGLVEDTACSIPRYFMFSKNFTSVGNPSVYATDPLTIWNRDGHAYIPPYVAFLNCTDPVIDDPRYVEVNGMLCDSRGHVYAVIYYSRYSFEMRDIKVGCHLIVATFGNWSNGLNNGWNNGPNVSYVDIHEWLHNGFWLSWALLKCIDQCGKGVGCFINETTNQIRCYDNYCEIMWINFGKGKCGIQLQIFGHLVRILAYIARYFKFAIKGLIYKITRLHYFSEWQEEGDFILIAPIPIFVAARYGYREIKKMSRDFKVKLGEGGFGSVYKGKLQSGPEIAIKMLKKSKADGEEFINEVASIGRIHHVNVVHLIGYCAEGEKRALVYEYMTNDRQAQIAKSHQIGEPSVVAVTVLVVKSSSRVAATISPLNGMSLPP*


CDS Sequence:
>Vu_13947.1
ATGGTGGTCTTATCTTCCTTTTGGTGTTCTGCACAATCGGTGATGGCCAGTGTGGCTATCATTATTGTGCTGTTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTATGTGCTCCTTCTTCGTGTGGAAAAATTCGCAACATAACTTACCCTTTCCGACTCAAAGGCGATTCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTGTGCACCTTGTTTTCAGGGAAATACCATGTGCAGAATATCGATTACGAGACATTCAAGATCCAATTGACTGATGCAGGTCTTGTGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATGTTTTCAAAGAACTTCACTTCCGTTGGTAACCCTAGCGTTTACGCGACTGATCCGCTAACTATCTGGAATCGGGATGGGCATGCTTATATTCCTCCGTATGTAGCGTTTCTAAACTGTACTGATCCAGTAATCGATGATCCTCGATACGTGGAAGTGAATGGCATGCTTTGTGATTCTAGAGGCCATGTCTATGCTGTTATTTATTATTCCAGATATAGTTTCGAAATGAGGGACATCAAGGTTGGGTGCCATTTAATAGTTGCTACCTTTGGAAACTGGAGCAATGGCTTGAACAATGGCTGGAACAATGGCCCCAACGTTTCGTATGTTGATATCCACGAGTGGCTACATAATGGGTTTTGGTTGTCTTGGGCACTACTTAAATGTATAGATCAATGTGGAAAGGGTGTGGGATGCTTCATCAATGAAACTACAAATCAAATCCGATGTTATGATAACTATTGCGAAATTATGTGGATTAACTTTGGAAAAGGAAAGTGCGGCATTCAGCTCCAGATTTTTGGACACCTAGTTCGAATTCTTGCCTATATAGCACGTTATTTTAAATTCGCCATAAAGGGACTAATCTATAAAATAACACGTTTACATTACTTTTCGGAATGGCAAGAGGAAGGAGATTTCATCTTAATTGCCCCTATTCCAATATTTGTGGCAGCCAGGTACGGATATAGAGAAATTAAGAAAATGAGCAGAGATTTCAAAGTTAAATTGGGTGAAGGAGGTTTTGGATCTGTATACAAAGGAAAACTTCAAAGTGGGCCAGAAATAGCCATAAAGATGTTGAAAAAATCGAAAGCTGATGGAGAAGAGTTCATTAATGAAGTGGCTAGTATTGGAAGAATACATCATGTAAATGTGGTACATCTTATTGGCTATTGTGCTGAAGGAGAAAAGCGTGCTCTGGTTTATGAATACATGACAAATGATCGCCAAGCCCAAATCGCCAAGTCGCACCAGATCGGTGAGCCCTCCGTCGTCGCCGTCACGGTGCTTGTCGTCAAATCCTCATCGCGAGTCGCAGCTACCATCTCACCCCTTAATGGAATGTCGTTGCCGCCCTAG


Promoter Sequence:
>Vu_13947::LG3:40844125-40846125(+)
TCTGTACCACTTCATACCTAATTTGCCCATTTAAAAAAAGATGTCAACATCCGTTTCACTTTAATAGATGTTGACATCCATTTACATTATATTTTAGTTTATTGTTTTTATTTTAAAAAAAAAATTTTCAACGATGTGGCCACATCCGTTTAATAGATTTTTAAAAAGTATTTTATTTATTATTTAAGGTTTAATAGCCAATTTAGTCCTCACTTTGGTTGAAAAATCTCAATTTAGTCTCTCGTTATAAAAGTGTTTTGAATTAGTCCTAACTTTTAAAATAGTGGGTCAGATTGGTCCTTTCTGTTAAATATAAGTTAACAAAATTAATGGATGATGATGTGACACAACTTAAAGCTAACGAGGGACCAATCTAACACATCAGCTTTAAGCTGTGTCACATCATCATCCATTAATTTCGTTAACTTATATTTAACGAAAGGGACCAATCTGACCCACTATTTTAAAAGTTAGGACTAATGCAAAACACTTTTATAACGAGGGACTAAATTGAGATTTTTCAACCAAAGTGGGGACTAAATTGGCTATTAAACCTAAATAATAATATATAAATTAAATTAATAATAATTATTTTATTAAATAAAATAAAATTAATTTATAAATAATTAAGTAATAATTTTAAAAAAATTAAATAATATTTATATATTAATTTAAAATATAAAAAATTAAAAAACTAAAAACTAAAAAAAAACTAATTCAATAGATGTCGCCGCATCTGTTGATGGATGTGACACATCTGTTTAATAGATTTATAACAAAATTTTTAATTATTATTTAAATAATAAAACATAAATTAAAATTAATAATAATTATTTTATTAAATAAAATAAAATTAATTTATAAATAATTAAGTAATAATTTTAAAATAATTAAATAATATTTATATATTAATTTAAAATACAAAAAATTAAAAAACTAAAAATTAAAAAAAAATGCAACGGATGTGGCACATCCGTTTTAATATATTTATAAAAAATATTTTAATTATTATTTAAATAATAATACATAAATTAAATTAATAATAATTATTATATTAAATAAAATAAAATTAATTTATAAATAATTAAGTAATAATTTTAAAAAAATTAAATAATATTTATATATTAATTTAAAATACAATAAATTAAAAAACTAAAAAAAAAAAAAAACTCAACTGATGTTGATATCTGTTAAAGAAAAGAGGTGGAAATATAGGATATTTTAAAATATAAAGAATAGTTTTGAAATTTAAAAAAAATATGGTGATATAAAAAGTAAGGCTTTATATCCTATTTTGTCTTCAGTTTCGTTTGAAAATGTTAAATTAGTCCATCCTTTAAAAAATGCGTCAATTACGTCCTCACTTAATAAAATTTGCATCAATGAATTCCCTTTCCTTAAATCCGTACAAACGGGCGTTAATTATCTAAGGAGAAGAAAGAGAAATAATTAACGCCGTTTGTACGGATTTAACGAAAGGGAATTCATTGATGCAAATTTGATTAAGTGAGGACGTAATTGACGCATTTTTTAAAGGATGAACTAATTTGAAAATAGAGTATTAAGCCAAAAAGTAAAGTAGAGTAGTGTAGGGAGCAACTCTCAGTCTGCAATTCTATACTACTGTAAATAAGCTTCAATAAGTGAAGCTGTAAAAATTGTTCTCCAGCACCGAAGAAAAAAAAACGGAATCTCCAGACCAAATCATGTCCTTCCTGTCACACCTAAAACATAGGAAGAAAATCAGAGAGGGTTGTTCATACCAATATCATGCCACCTCATTCCTCAAAATCTCGTAAATAAATATTCTTCTCAATTCCAAGGGTTTGTTGGTCTTTTTATTTGAAATATGGAGGTGCAGGAAGCAAGTACAGAGGTACAAGTAGAAGCATCCCATAATCACTTTGAAAGTTCAACGAGTGGTCGTACGTTATCAGTTGATTTTGGTGAATTATTTAACTATGATATGTCCCATTTACACGACCAGAAGAGGTCAACAA


Gene Sequence:
>Vu_13947(+)
ATGGTGGTCTTATCTTCCTTTTGGTGTTCTGCACAATCGGTGATGGCCAGTGTGGCTATCATTATTGTGCTGTTCCAGCAAACTCACGGTGCCCAGGATCGTCCATTATGTGCTCCTTCTTCGTGTGGAAAAATTCGCAACATAACTTACCCTTTCCGACTCAAAGGCGATTCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTGTGCACCTTGTTTTCAGGGAAATACCATGTGCAGAATATCGATTACGAGACATTCAAGATCCAATTGACTGATGCAGGTCTTGTGGAGGACACTGCTTGCTCCATTCCTCGCTATTTCATGTTTTCAAAGAACTTCACTTCCGTTGGTAACCCTAGCGTTTACGCGACTGATCCGCTAACTATCTGGAATCGGGATGGGCATGCTTATATTCCTCCGTATGTAGCGTTTCTAAACTGTACTGATCCAGTAATCGATGATCCTCGATACGTGGAAGTGAATGGCATGCTTTGTGATTCTAGAGGCCATGTCTATGCTGTTATTTATTATTCCAGATATAGTTTCGAAATGAGGGACATCAAGGTTGGGTGCCATTTAATAGTTGCTACCTTTGGAAACTGGAGCAATGGCTTGAACAATGGCTGGAACAATGGCCCCAACGTTTCGTATGTTGATATCCACGAGTGGCTACATAATGGGTTTTGGTTGTCTTGGGCACTACTTAAATGTATAGATCAATGTGGAAAGGGTGTGGGATGCTTCATCAATGAAACTACAAATCAAATCCGATGTTATGATAACTATTGCGAAATTATGTGGATTAACTTTGGAAAAGGAAAGTGCGGTGAGAAAAAATTCTTCTACCTCAATTTTTCTGTCCCTTTTATTGAAACGTGTTGTACAAACAAATAGCTTTAATCTTTACAATATATGTTAATGTTTTCTTTTTCTGTTCTAGGCATTCAGCTCCAGATTTTTGGACACCTAGTTCGAATTCTTGCCTATATAGCACGTAAGAGCTTTCTCCCATATCTTTGTCCTTTCAATTACTACTGTACTGACTACTTAAAGTTAATCTATATTTTGACTCATTAGTAAGCTGTACAATTTCTGTACGATTCATTCTGATAACCTGCAAGTTGTGCATCAAAGTTGATAAATTTTGAAACGCATATCGTTCTGTACTCTAACTCAACAAGTAGTTGACAGGAGTTTCTAAACAAAAAGCCTTAAAGGGATGCTCAATGGGATTTCCATGATACGTTCACGATATTCTCCAAATTTATTTCAACATTAACCAAGATGTATCTGTTTGAAAATGGTGTTTTGGGAAAGGACCAGGAACTGGATCCCTCAAAACATCATACGAATCACAAACCAAGAAGTTATTTGAATGCATTTCATGACGCTAGAAATGCATAGGATCCTTAGAATGAACGTTCTCTGAAAAACGTATGTTTATTTATAATATGTATCCAAAGTATCCTTAAAATACTGAGTGTTCTTTTGTTTTGATGCTATTATATTGCGTTATTTTGCAGGTTATTTTAAATTCGCCATAAAGGGTAATGCCTTGTCAACTGATTTCATATTTGAATAAACTTACTGATTAGACTAACCATGGTTTCTTTCCTTACTCATTCCATGAAATTTGTCTGCACAGGACTAATCTATAAAATAACACGTTTACATTACTTTTCGGAATGGCAAGAGGAAGGAGATTTCATCTTAATTGCCCCTATTCCAATATTTGTGGCAGCCAGGTTTCTGTTTGGATTCGCACTTTTGCTTGCACTATTTATCCATACGTGGCGACGTAGGCATTGCTCAATGTATGAAAACATTGAAACGTTTTTGCTACACAATAATCTAAATCCTATTAGGTACGGATATAGAGAAATTAAGAAAATGAGCAGAGATTTCAAAGTTAAATTGGGTGAAGGAGGTTTTGGATCTGTATACAAAGGAAAACTTCAAAGTGGGCCAGAAATAGCCATAAAGATGTTGAAAAAATCGAAAGCTGATGGAGAAGAGTTCATTAATGAAGTGGCTAGTATTGGAAGAATACATCATGTAAATGTGGTACATCTTATTGGCTATTGTGCTGAAGGAGAAAAGCGTGCTCTGGTTTATGAATACATGACAAATGGTTCGTTGGATAAACACATCTTCTCCAAAGAGGAAAGTGTCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTTCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTAGATAATAACTTTATTCCAAAGGTTTCAGATTTCGGACTTGCAAAGTTGTATCGTGTCAAAGATACGTCTATTGCTTTAACTAAAGCTAGAGGAACTTTGGGTTACATGGCTCCAGAATTATTCTACAATAATATTGGTGGAGTATCAAATAAGGCTGATGTATATAGTTTTGGGATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATCTATGATCAAATTAAAGATGAAAAAGATACTCAAATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAGAATGTATGTAGTTGCGCTTTGGTGTATACAATTGAATCCAAATGACCGTCCTTCAATGAAGAGAGTTGTGGATATGTTGGAAGAAAGAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAATTGAACATGATCGCGGAGAGGACTCAAACCAAGCATCATGGAGTGGTTCAACCAGTTCTAGCAATAATCTTGGCAAAACTAACACTAATCATCCATGGCAGAGCGATGCTTAACGGACAAAGGTTAACATTTCATATTAAGTATGCAGAGGATCGCAAAAAAATTGCTTAGAAAGGCTCCCAAGAGGTTCCAGTGTTGGGAAATCCGGTTTTAGCATTTTCATCTGCTTTTATGTGAAATACTGGCTTTCTTCAATATCTCAACATAAATTGTGACAACTGGTTTCTCTATGTTTAGGAGAATGGTGGACCTTTATCCTATTGGCATAAATATTTAATCCGTCTTTGTAGTAGTATAAAAAGAACATTTGTAGTAATATAAAAATATGTAATATTGTTTTAAAATTGGTTACTTAATAATTAAAACATTTTTATTTGAATTTATTGTGTTCTGTATCAATTTTACTATCCATGTATAAGTTTAGTTGAAACATCCATTGCTTAATCTAGATGACAGAGAAATCAGATTCATTAAGTCACTATTAGGCGTATTTACTTATGATATGAAAAAGAAAAACATCTCCATTATTACGATAAAACTAAGTTAAAGGACTAAAAAACAAATTTAAAAAGAATAAGTTAAAAGAGTTCAAACAAAAGTTTATAATTTATTAGGTATTTTATTCACAAAATAATTTAGTAAATATTAAAAATAAAAATAAAAGTATATAAGAAACTTAAAATTTATTTACAACTATTATTGCATTTTATATTTCCTAATTTAATTGAGTACTTAAAGTTTTAGGTCTATTATAGATATATGCATTATACCATAACTTATTCTAAACCTAAATAGTATAGAACTCATGGCTTTAAAGAGTACTAGTAAAAAAAGTAGATTCTAACGCGCTATATAGGCTTCGGTTATGCAAAACCCGAAGCGTAAAAGGTTATATACCTCGGTTACACCTTGACCTGAGGCAGAATGGTGATATTGCCTCAATTAGAAGAAGACCCGAGACCTATACCTCTACTTTTTGTCTGACAACATTTTGAAAAGGCCCTATTGCCTCGGGTTGCCAGGCAACCGCTGCGTATACTCCTGTGCAAGTCAGGCTTTTCGCCTATATACCTGCTGCACCTGCTAGGCACCTGACATTTCAGTACTTTATACATCGGGTTTGGCTCTTAACTGGTGCCATATTGTGCTCTTCACTCCACTTCTCCGATCTTAACCTACACACGCTTCATTTGCACAACCTAACAGCTTCTTCTTTCTTCCCCTCTGCGGTTTCGTCCACCACTGCCACTCCTTGCCAGTGCTCTCTCATTCTTCCTCTCCTTGTGCTGCTAGTGGTCTCGCCTGCCTCCTGCTCGTTGCCGTTCTTGGCGTCGTGCCTCCTGCCTGCGCCGTCACGCCATTGGTGCCCCGCCGCTGCTGCCTGCCATGCTTCCTCTAACGACGCCGCTTATGTCGTTGTTGTAGCCTCCGTCGCTGCTGCCTCCGCCACTACCAAGCCCAAATGGCCAAATCTATTAGGGTTTTTGCCTCCTCCCCCTAAAATCAAAGAGAGTATCTTCATCTTCATCCACCGCTCCAGATCGCCAAGCCCAAATCGCCAAGTCGCACCAGATCGGTGAGCCCTCCGTCGTCGCCGTCACGGTGCTTGTCGTCAAATCCTCATCGCGAGTCGCAGCTACCATCTCACCCCTTAATGGAATGTCGTTGCCGCCCTAG