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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13841 LG3 36046940 36051610 hypothetical protein BVRB_1g021420
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Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to hypoxia, cellular response to hypoxia, brassinosteroid mediated signaling pathway, cellular response to hypoxia, brassinosteroid mediated signaling pathway, negative regulation of cell death, protein phosphorylation, leaf senescence, regulation of seedling development, cellular response to hypoxia, brassinosteroid mediated signaling pathway, leaf senescence, brassinosteroid mediated signaling pathway, protein phosphorylation, cell death, regulation of seedling development, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, negative regulation of cell death, protein phosphorylation
Cellular Component   located in   chloroplast, plasma membrane, mitochondrion
Molecular Function   enables   protein binding, receptor serine/threonine kinase binding, transmembrane receptor protein tyrosine kinase activity, receptor serine/threonine kinase binding, protein binding, protein binding, protein binding, protein binding, protein binding, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein binding, transmembrane receptor protein tyrosine kinase activity, receptor serine/threonine kinase binding, protein binding, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, signaling receptor binding, protein binding, protein binding, transmembrane receptor protein serine/threonine kinase activity, protein binding, protein binding, protein binding, transmembrane receptor protein tyrosine kinase activity, protein binding, protein binding
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_13841.1
MRSCFETGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNRFTGPIPDSLGKLSKLRFLRLNNNSLSGPIPMSLTNITALQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISAPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYIEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR*


CDS Sequence:
>Vu_13841.1
ATGCGCTCGTGCTTTGAAACAGGAGATGCTTTGCATAGTCTGAGGACTAATTTACAGGACCCTAACAATGTTTTGCAAAGTTGGGATCCTACACTCGTCAATCCATGTACATGGTTTCATGTGACATGCAACAATGATAATAGTGTTATCAGAGTTGATCTGGGGAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTTGGTCAGCTCAAGAATTTGCAGTATTTGGAACTGTACAGCAATAACATTACTGGCCCTATCCCAAGTGACCTGGGGAATCTTACTAACCTGGTGAGCTTGGATCTGTACCTAAACCGTTTCACTGGCCCAATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTCCGGCTTAACAACAACAGCTTGTCAGGTCCTATTCCCATGTCGCTGACTAATATTACTGCTCTCCAAGTTCTGGATTTGTCTAATAATCATCTATCAGGAGTGGTTCCCGATAATGGCTCCTTCTCATTATTCACTCCTATCAGTTTTGCAAATAACTTGGATCTATGTGGACCCGTTACTGGGCACCCCTGTCCTGGCTCTCCTCCATTTTCTCCTCCTCCTCCTTTTGTTCCTCCACCTCCAATTTCTGCCCCAGGAGGTAATAGTGCCACTGGAGCAATAGCTGGAGGAGTTGCTGCTGGTGCTGCTCTATTGTTTGCTGCACCTGCAATTGCATTTGCCTGGTGGCGTAGAAGGAAACCACAAGAATTTTTCTTTGATGTGCCTGCTGAAGAGGATCCTGAAGTTCATCTAGGACAGCTTAAAAGGTTCTCTCTACGAGAACTGCAAGTGGCAACAGATACTTTCAGCAATAAGAACATTCTCGGGAGGGGAGGATTTGGTAAGGTGTACAAAGGACGGTTGGCAGATGGTTCATTAGTGGCTGTGAAACGGTTGAAAGAGGAACGCACACCTGGTGGGGAGCTTCAGTTTCAGACCGAAGTAGAGATGATTAGCATGGCTGTGCATAGAAATCTCCTTCGACTACGTGGGTTTTGTATGACACCAACAGAAAGGCTACTTGTTTATCCCTACATGGCTAACGGAAGTGTTGCCTCATGCTTAAGAGCTCCTGAGTACCTATCCACTGGTAAATCTTCAGAGAAAACCGATGTTTTTGGTTATGGTATCATGCTTCTGGAGCTGATCACTGGACAGAGAGCTTTTGACCTTGCTCGGCTTGCAAATGACGACGATGTTATGCTGCTTGATTGGGTAAAAGGACTCCTGAAGGAGAAAAAGCTTGAAATGTTGGTTGATCCTGATCTACAAAACAATTACATAGAAGCTGAGGTAGAACAATTAATCCAGGTTGCACTGCTCTGCACACAAGGTTCCCCTATGGACCGACCAAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGTGATGGGTTGGCAGAGAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTCCGGCAGGAGGTGGAGCTGGCCCCTCATCCCAATTCTGATTGGATTGTCGACTCGACTGAAAATCTGCATGCAGTTGAGTTATCTGGTCCAAGGTGA


Promoter Sequence:
>Vu_13841::LG3:36051610-36053610(-)
AAGTAATGTTGGGCCCAGAAAACTCACTCGCATTTTGACCAAAAAACGGGGTTTTGCCCCTCCATGTTAGAGTCACGTCACTTTCCACGATCTCGCGCGAGAGCGTTTTTGACTGCGTTAGGGCAGGGGGCAGCACCGTTCGGGCAGCTTCATTTTTCTTTTTCTATCCATCTATTTTACACTCTCACTCCACGCCTCACTCAAAAAAGATAACAATCTTACACTCTCACCAGCTGACAGAGATAGAGAGAGAAAGAGAAACAGTATCTGTGTTTTCCTTTCCAAGATAGCTAGAGCGAAAGTGGAAAAAAAAAAGTTTTTTATTTTTTCATATACTTGAAGAGAAGGGAAAATGTTTTGATTCTTTTAGTTTTTGAGAGCTTGTTTTGTGTTTCTGGGTTTGAGTCTCTGGAGTTGTCGAAAATTGGCGTATTTTGGTGAGATCGGGGTGTGGGTGTAGTGTGGCTGGTGGTAATGGCGGAGATTTGAGAGTTAGGGTTTGAGTTCATTTGAGTTTGTATTTATAGTGGTGGTGGCGGAAGAGTGCTGGGGTGTTTTTGTGATGGTGTATTGGTGTGGGAGGTCTTGTTTGGATCTGAAGTTATTGAGTACATAGGTTGATGGAGAGAAAGTTGATGGATTTGAGTTTCATTTGTTGGATATTGTTGATTCATCCACTATGCCTGATTTCTGCTAACATGGAAGGTTTGTAATGCTTGCATGGAGTCAAATTATTCTTTGTTTGATGATTTATTTATGCCTCGTTAAACAAAACCCGAAAGAGGGAGCTGTTTTCAAGCTTCTTTGGACTTTTGATTCTTGCTTCCTTGATTTTATTTAGTTTGGTAAAGAAGATTCCTTTCTTTTTTTGTTTCCTTCTTGGATATGAAGGGGTTTGTGTATTCATGAAGGAGACTCGTCTTGTTTTGGCACTACTCTCTTTGGGTGTTTAATCCATCTTCATTCCCTTAGCTAAGTGACCCTATGGAATCTTTTTTGTCACTGTTTATTTTTGGTATAACAAATCTTCAAAGATTTTTCTCCTCTTAATTGATGAGTGCCATTTTACGACAATGCCTTCTTGCTGGCCCTCTCTTCCCAATTCAAATTAAGTATTGAATTATTACTTCTATGCGTAGTAACAGTATTTATCACGGAATGTGCCCGACCTTTTTGACCTTTATGATTACGTTCACCTCTCTGGTCAATAAAGTCTTAGTTATAATCTACTAGACAGTTTAGAATATATTCTGTGTTATAATCTACCAAACTGACCGAAACGTGTCTGTGTGTGCTGTCTTATTGCGTTAACTCGTGAACTCCTCAATGTTTTTGAGTAGTGTTTTTTGAGCTTTAAAGTGTTTTGCTCCAATCAATAAGATATGTTTTTGAAGTGTGCTTTTTTGGGCGCTCATGTGCCTGTCGTGTGTTGTATTGATATGTGAATTTCTGTATTTTTTAATCCTGTTTTTGTGCTTGAAATGTATTGCTAAATCTGTGATATGTTCTTGAAGTGTATTTTTATGCACACTCGAGTGCCTGTTAGGTTGTATTAACTAGTGAATTTCTCTGTATTTTTCAATCCTGATTTTGCGCTTTGAAGTGCATTGCTCCAACTCGAACCTAACGCCTATTGCTCCAATCTGTCTACATGCTATCTTATTGCAATGTAATTCCTATGCGCATGTTTGTGCCTGTCCCGATTGTATTTTTCAATCAGGATTTTTGTGTTTGAAGTGTATTTCTCCAACCTATATGGTATGCTCTTGAAGTGTAATTTTTTGTTTACAGGAGTTTGTCGTGTTGCATTAATTAGTGATTGAAGTGTGTTCAATCCTGTTATTTTTGTGTGCGTGACGTGTATTAGTTCAAACTCTGTGGTATAATATTTTTCTTTTGTGCAAATTTCTAACTACATTATCATGCAACTTTACTACTGGAAAAAATCATCTGTGTGGATTTGACACATGTTTATTTTGAACTTTAAAGTACCTGATTGC


Gene Sequence:
>Vu_13841(-)
ATGCGCTCGTGCTTTGAAACAGGAGATGCTTTGCATAGTCTGAGGACTAATTTACAGGACCCTAACAATGTTTTGCAAAGTTGGGATCCTACACTCGTCAATCCATGTACATGGTTTCATGTGACATGCAACAATGATAATAGTGTTATCAGAGTGTAAGCTGCTCGTTCCTTGATATCTGTCACATATCTGTCACATATATGTTAATTTTGTCTGAACAGTTTCTGTTAACTGAGGACGACTTCTCTAATGGTTGCTTTTGATCTTTACTTTGTTCTGATGTCAGTGATCTGGGGAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTTGGTCAGCTCAAGAATTTGCAGTATTTGTATGTTATCACTTGATTTGATGTTCCAATGATTTTTTATTCTTTTGTAATTTAATTTTGAATGGGCCTTGTTAGTGAAGTGACAACTTTGACTTAACTTTCCTTGTTTAATTTGGACATGTGATTATAAATTATTGAATGTGATTCTCAAGTTGGTTCATGATGTAATGGGGTAGTGGTTATTTGAATCTTCAATATCCAGCTGGATGGTCATGTTGTGTGTTGGCAATAATATGTGGTTTCTGTTCCTTTTCATCTGGTTTTTATAATTCTTTTAGACTGCTAGACTTGGTAATGATGCTTATTTGTGTGCTGCCCCATCCTCACTTAAAATTATCTGTCTTGTTTCAATGGAGTGATTATTCATATGAATATTACTTCGGGGAACATGGTGTTCTAATGTTTAAGTTTGCTATGCAAGTCAACCTAATGGATAGTTTTTTATCTGTTAGGGAAACATGAGAAAACAATAACTTGTTTTACCTTAACTCTATCCTTTACTTATGCAGAATATGGGGTGCTCCTGAATCTAATTATTGAATTTCCACGAAATATTTAGTTTTTTTGACAGATGCTTATTTTACTAATATTGATTTAAGTATTCTTTTATCTTCGTAACTTTTTGATATAAATTGTTTTTCATAATAGGGAACTGTACAGCAATAACATTACTGGCCCTATCCCAAGTGACCTGGGGAATCTTACTAACCTGGTGAGCTTGGATCTGTACCTAAACCGTTTCACTGGCCCAATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTGTGAGTATAGATTCTGAATTTTTTATTATGTAAACAGCTGTTTTTGTTTTTCTTCTGTTGAAGGGTAAAAGATTGATCTGGTGTTTGCAATCTTGTGGATTTTAATATCCGTATGGTTCTTAATTCTTTTCTCCTGTTATGTCTAAGGATAGCCGGCTTAACAACAACAGCTTGTCAGGTCCTATTCCCATGTCGCTGACTAATATTACTGCTCTCCAAGTTCTGTAAGTGCCACTAATACGCCATGTATTTCTCTCTTTTTTATTTCTATGTGGTGCTTATGTTTTGCCCTCAATTTGTGTCACGTGTAGGGATTTGTCTAATAATCATCTATCAGGAGTGGTTCCCGATAATGGCTCCTTCTCATTATTCACTCCTATCAGGTCTCGTACTGAAAATTGTGTTGTTGTCATATTGGTTTTGATATGTAAGTTTTTTCTGAACGTGCTTCCTGTCTCAGTTTTGCAAATAACTTGGATCTATGTGGACCCGTTACTGGGCACCCCTGTCCTGGCTCTCCTCCATTTTCTCCTCCTCCTCCTTTTGTTCCTCCACCTCCAATTTCTGCCCCAGGTAATCTTCCTTCTGTTGCAATTGATCTTTTAGTTGTAAAGGTGATTTTACAAAACTTATGGTGATGGCTGTTTCAATTTTTTATTATAATAAAGGTGTCTTATATTTGCTGACCATCATACAGACGCACCTGTGTAGATGAATATTTTTAGTCATGCTATGGGACTGAATTTGTTTTTTTCACTTGTGGTGTTTAAGATCTCTTCCAGTTCTCTGGAAAAGATTCTAGCATTTTATGTAAACATGTGGAGTTTTGAAGATTAAATTCTTTATTGGCCCAATTTGGAATTGAAAATCATTGGTCAGTCATATCTTGTAATATCCTCTAGATTTGGTTGTATTGCTGCTCCTACGTGGTTTATATTTATATACTAATGTTTATGTTAAACATAAAGATAGAAGAAACAGTGATGATCCAACCTTCCTCTATATCTAATTTCAGGAGGTAATAGTGCCACTGGAGCAATAGCTGGAGGAGTTGCTGCTGGTGCTGCTCTATTGTTTGCTGCACCTGCAATTGCATTTGCCTGGTGGCGTAGAAGGAAACCACAAGAATTTTTCTTTGATGTGCCTGGTGAGCCATACTTGAACAGTGAGTGTAACAGTTTCTGAACTTGTTTAAAGAATATAATTTGACTTGATTGCGTATGTTTGCAGCTGAAGAGGATCCTGAAGTTCATCTAGGACAGCTTAAAAGGTTCTCTCTACGAGAACTGCAAGTGGCAACAGATACTTTCAGCAATAAGAACATTCTCGGGAGGGGAGGATTTGGTAAGGTGTACAAAGGACGGTTGGCAGATGGTTCATTAGTGGCTGTGAAACGGTTGAAAGAGGAACGCACACCTGGTGGGGAGCTTCAGTTTCAGACCGAAGTAGAGATGATTAGCATGGCTGTGCATAGAAATCTCCTTCGACTACGTGGGTTTTGTATGACACCAACAGAAAGGCTACTTGTTTATCCCTACATGGCTAACGGAAGTGTTGCCTCATGCTTAAGAGGTAGATCTTCTGTTTCATTTTTTTTAGCTGTTGTTCAAGTCCTTGATTCTCTTATTTCTTTCATTCCTTTCTTTGCCCCTCTCCCCCTCCCCATCTTGAATGGAACAGGGTTCTCATTGTCCTATTTACCATTTCCCCGTAGTTCTACTTTAGCATAAACTTATGAAAGTAGTATAGTTGTTGGGTGGTCAAGCCGTGGGATGTTCTATTGGGAATGGTGAAAAAATGGAACAAGTTATGCACTTTTTCTCCGTTAATTTGGTAAAAAATATACATTTACTCCCTGTGGTTTAAAAAGGAACCTGTAGCTGTAAAAGTCCTGAGGACTTCTTCAAGTCTAAAATCTTAACTGGTCTTAGCTATTCTCTTAACTTCTTAATGTCATCTACCCATTTAGAGTCTGGGATGTTGTCCATATTTATTTTATATTGTTTAACCAGGTGTTAGTTGTCATTAACTTAATTATTAAATTTATTATCCTTCAGCTTGGAAAAATATTCTCAATTTTATCATTTTAATAGGCCATTTATTGGGAAAGTTTATTCCTTAATTCCCATGCTCAAAGCAAAAAGAGATTATAGAGTAAAGATATAAAAAAATCTATGCTGTTTTATGGAAATTTTATTTTTTTAGCTTGATTGCCAAACTGGAAGAAATCCCAAGGTGTGCATAGTAGCACGCATTCTGTGCTTAAAGTAAATATCCTTGGCCCACCTTGTATTTTTAATCATTCAAATATTCTTTATTTTAGAGCGTCCTCCACATCAAGAACCCCTGGATTGGCCAACTAGGAAAAGAATAGCTTTGGGATCTGCAAGGGGTCTTTCATATTTGCATGATCACTGTGATCCAAAGATTATTCATCGCGATGTGAAAGCTGCAAACATATTGCTGGATGAAGAGTTTGAGGCTGTTGTAGGGGACTTTGGATTGGCCAAACTCATGGATTACAAGGACACCCATGTGACAACTGCTGTAAGGGGCACAATTGGGCACATAGCTCCTGAGTACCTATCCACTGGTAAATCTTCAGAGAAAACCGATGTTTTTGGTTATGGTATCATGCTTCTGGAGCTGATCACTGGACAGAGAGCTTTTGACCTTGCTCGGCTTGCAAATGACGACGATGTTATGCTGCTTGATTGGGTATGTTTAGCGTGAAAGTATATGTTGTGTTTCTGTTATTATTTATCACGCAGTTACTTTCATGCAGCTCATGAATAGCCGGAGTACCAGTTATTGTTATATTTATTGTTAGGAAGAATGATTGTGTCCATCTATGATGTGCATAAGATATGTGTATTGCATATGATATATATCTGACATGCAAATATGGTTAAAACTTATAAAACAATAAATATATAATACTGCAAATCCAAACTAAGATCACTATTCTTCTTCCAAGCACGATTCAGAATATTGACATTTCTTTATTCGGTAAAGTATGCATCTCAGCTAGGCAAAGGCAAGAATCACAAGTATTCGATTATATTTTGATTTCTGTTGTTACTTGTTTGACTAGTTGAGAATTATCTGCTTATGTATTTTCCAAAACAAGCTTTCTTCCTTGTTTAAAAGTACCCTTTTCTGTAATGTAATGTATGTAAATCTAATACAGCTGAATATTTTCACAGGTAAAAGGACTCCTGAAGGAGAAAAAGCTTGAAATGTTGGTTGATCCTGATCTACAAAACAATTACATAGAAGCTGAGGTAGAACAATTAATCCAGGTTGCACTGCTCTGCACACAAGGTTCCCCTATGGACCGACCAAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGTGATGGGTTGGCAGAGAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTCCGGCAGGAGGTGGAGCTGGCCCCTCATCCCAATTCTGATTGGATTGTCGACTCGACTGAAAATCTGCATGCAGTTGAGTTATCTGGTCCAAGGTGA

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