Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13678 LG3 32500386 32501261 PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 32500427 missense_variant p.Val237Met
A/G 32500429 missense_variant p.Leu236Ser
G/C 32500445 missense_variant p.Arg231Gly
A/G 32500460 missense_variant p.Tyr226His
T/C 32500463 missense_variant p.Thr225Ala
T/C 32500468 missense_variant p.His223Arg
G/A 32500508 missense_variant p.Pro210Ser
C/T 32500519 missense_variant p.Ser206Asn
G/A 32500534 missense_variant p.Pro201Leu
G/A 32500535 missense_variant p.Pro201Ser
T/C 32500552 missense_variant p.Asp195Gly
C/T 32500553 missense_variant p.Asp195Asn
A/G 32500554 synonymous_variant p.Asn194Asn
C/T 32500564 missense_variant p.Gly191Glu
C/A,T 32500581 missense_variant p.Lys185Asn
C/T 32500592 missense_variant p.Asp182Asn
C/T 32500607 missense_variant p.Glu177Lys
G/A 32500626 intron_variant
G/C 32500635 intron_variant
C/T 32500636 intron_variant
G/C 32500644 intron_variant
G/A 32500650 intron_variant
C/T 32500651 intron_variant
G/A 32500653 intron_variant
G/A 32500656 intron_variant
G/A 32500662 intron_variant
T/A 32500670 intron_variant
A/G 32500676 intron_variant
A/T 32500713 intron_variant
A/G 32500717 intron_variant
T/C 32500718 intron_variant
C/T 32500732 splice_region_variant&intron_variant
G/C 32500749 missense_variant p.Asp171Glu
C/A 32500769 missense_variant p.Asp165Tyr
T/C,* 32500773 synonymous_variant p.Gln163Gln
T/C 32500774 missense_variant p.Gln163Arg
T/A 32500784 stop_gained p.Lys160*
G/A 32500789 missense_variant p.Ala158Val
C/T 32500790 missense_variant p.Ala158Thr
T/C 32500793 missense_variant p.Thr157Ala
C/T 32500796 missense_variant p.Val156Met
G/A,* 32500800 synonymous_variant p.Arg154Arg
G/T 32500803 missense_variant p.Phe153Leu
A/G 32500804 missense_variant p.Phe153Ser
C/T 32500817 missense_variant p.Ala149Thr
G/A 32500821 synonymous_variant p.Ala147Ala
G/A 32500825 missense_variant p.Ala146Val
A/G 32500827 synonymous_variant p.Val145Val
C/T 32500835 missense_variant p.Asp143Asn
C/T 32500843 missense_variant p.Gly140Asp
C/T 32500878 synonymous_variant p.Gln128Gln
C/T 32500917 synonymous_variant p.Ala115Ala
C/A 32500920 missense_variant p.Met114Ile
G/T 32500924 missense_variant p.Ala113Glu
G/A 32500943 stop_gained p.Gln107*
C/T 32500954 missense_variant p.Arg103Lys
C/T 32500974 synonymous_variant p.Leu96Leu
C/T 32500985 missense_variant p.Val93Ile
T/C 32500988 missense_variant p.Arg92Gly
G/A 32500989 synonymous_variant p.Phe91Phe
G/A 32500995 synonymous_variant p.Tyr89Tyr
A/G 32501014 missense_variant p.Ile83Thr
A/G 32501021 missense_variant p.Trp81Arg
G/A 32501031 synonymous_variant p.His77His
T/C 32501039 missense_variant p.Asn75Asp
A/G 32501048 synonymous_variant p.Leu72Leu
A/G 32501080 missense_variant p.Phe61Ser
G/A 32501095 missense_variant p.Ala56Val
G/A 32501106 synonymous_variant p.Gly52Gly
C/T 32501108 missense_variant p.Gly52Ser
A/T,G 32501118 missense_variant p.Ser48Arg
A/G 32501167 missense_variant p.Val32Ala
C/T 32501194 missense_variant p.Ser23Asn
T/C 32501200 missense_variant p.Asp21Gly
C/T 32501204 missense_variant p.Val20Met
C/T 32501216 missense_variant p.Asp16Asn
A/G 32501220 synonymous_variant p.Ser14Ser
G/A 32501233 missense_variant p.Pro10Leu
A/G 32501236 missense_variant p.Val9Ala
C/T 32501245 missense_variant p.Ser6Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13678.1
MKLVLSGDVPCVISDDGSGVDSSPNLAIWIRVFESGFLFDLRLGSFESWNPGRRAAIFWWFRTRRQGTPSYLDPNYHHSFWLIEKSDVYSFRVVLLELISGKRAVDQNRDKRAMALVDLVVSRIQMGQLHQVLDPVFKLGDSDGVAAVAELAFRCVTADKDDQPDSREMVDELRQMEVGFPDIIKLGSMAGSPNDLDDQPPGASLSLKGPIMGVGGSKPFVKHHTYILRIRFCRFLVDEARFGQPLVVV*


CDS Sequence:
>Vu_13678.1
ATGAAGCTCGTCCTAAGTGGTGATGTGCCGTGTGTAATCTCTGACGATGGCAGTGGAGTGGATAGCAGCCCAAATCTTGCAATTTGGATTAGGGTTTTTGAATCTGGGTTTTTGTTTGATCTACGTTTGGGTTCCTTTGAGAGTTGGAATCCCGGCCGTAGAGCTGCGATCTTCTGGTGGTTCAGGACACGACGTCAAGGAACACCGAGCTATTTGGACCCAAATTACCACCACTCATTCTGGTTGATCGAGAAGAGCGACGTCTACAGTTTCAGAGTTGTGTTGTTGGAGCTTATCTCGGGAAAGAGAGCGGTGGACCAGAACAGAGACAAGCGCGCAATGGCGCTTGTGGATTTGGTTGTTTCCAGGATCCAGATGGGGCAGCTCCACCAAGTTCTGGATCCGGTCTTTAAACTCGGTGACAGCGATGGAGTTGCCGCCGTCGCAGAACTTGCATTCCGCTGCGTGACGGCAGATAAGGACGACCAACCGGATTCAAGGGAGATGGTGGACGAGCTGCGACAGATGGAGGTTGGGTTTCCGGATATCATAAAGCTTGGATCCATGGCCGGGAGCCCCAATGACCTTGATGACCAACCACCAGGGGCTTCTCTCAGCTTAAAAGGCCCTATAATGGGTGTCGGGGGAAGCAAACCCTTCGTCAAGCACCACACCTACATTCTTCGGATTCGTTTTTGTAGGTTCTTGGTGGATGAGGCTCGATTTGGCCAACCCTTAGTGGTGGTATGA


Promoter Sequence:
>Vu_13678::LG3:32501261-32503261(-)
ACCTTTATGTTGTACACATGGTGTTTGAGCTTGAGTATGTTCATATATTAGAATAGTTTACTGAACCTGAAATTGAGAGACATAGTGGTCAAGCAGAAGTTGAAAGAGAGGTGTGCTGAAAAACAAGTTTGGATAAAGGTTGTTGAACCACAAATTGAGTTAGACCAAGAGGAAGAAGATGTTGTAGTGGCTGATTTAAAGTTTGAGATAGTGGTTGAGGTAGAATCTGAGGTAGAGGGTCACGGTTTTTTGGCACAGGGTCAGGCAGAGCCTCAGGCAAATGGGGAGGGATACATTGATGTTGGTGTGAATGTAGAGCGGTAGGTAAAGGCAGAGGCTGAAGTAGAGGTTGAGGCAGTGGCTGATGTAGACGTTGAGGTACAGGCTGAGGTAGAAACCGAGGTAGAAGCTGAGATAGAGGGTGATGGTTTTTTGGCACACTGTCAAGTAGAGCCTCAAGCTGAGGTTGGGGCAAATGGGGAGGGAGACATGGATGTTTGTGTGAATGTAGAGGGCCAAGCTGATGTAGAGGGGCAGGTAGAGGCAGAGGGTGAGGTAGAGGGTGATGGTGTGGAGGTACAAGGTCAAGCTGATGTAGAAGCTGACGAGTATGATGTTATAAGTTAGAATGGGTCCGTAGAGGATGTATTGACTGACCATGAAGATGAAGTAGAATTTGATATATTTGAAGCTACTAACCAAATAGAAATTGGTGGACCTAAGTGTTTATCTAAAAGTGATTGGGAATCTGACACTTTGAATAGTGTTGTGGAAAGTGATAACACAGATGATGATAAAGATAGGTATGGGGATTTTGGGATTTTTTCAATGCCCAAAAGTATGGAACAATATAAATGGGAAGTGGGCACGTATTTCCCTGAGAAAAAAAGATTTTATAGAAGCAATAAGAACGAATGAAGTAGAGAATGGTAGGAAATTAAAAGTTTATAAAAATGACAAAAGAAGAGCTTGTGTCAAATGTTCTAGGGCAAAAGGAAAATGCACATGGCATGCATATTGTGCATATAAGGCAGTTGAAAATACATGGCAACTAAGGAAGATTATAGACAAGCACACATGCAATAGAGAATTTAATATCCGTTTAATGACTTCAAAATGGTTGAGTGGGAGGTTAGAGAAGACCATAAAAGAGAATCCCGATATTAATCTGTATAACCTCCAAAACAAAGTTTCTAAGAAGTGGAACATTGGTGTTTCTTGGTCTACAACCTGTAGGGCAAATAGAAGGTGATTTTAAAGAATAATATAAAAGAGTGTATGACTATGCAAATGAGTTGCTTCGGTCAAATCCTGGTTCAACTGTCAAAGTTAATGTTGAACCTAATGAGGACACTCCAATATTTAAGAGACTATATGTGTGTTTGAAGGCCTGTAAGGACATCTTCGTTTCATGTAGGCCTATTATAGGTTTGGATGAGTGTTTCTTAAAAGGAAAATTTGGAGGTGAGTTGTTGACTGCAGTTGCAAGAGATGTGAATGAGCAAATGTGTCCTTTGGCATACGCTGTTGTGGAGGTGGAGAATAAGGACAGTTGGGCTTTGTTTTTACAATTGATCATTGATGATCTTGGTGGTGTGGAGCTTTGTTCAACAATTACATATATTTCAGATCAACATAAAGTGAGTAACGTAGCCCATTGTTTTTTTTATCTTTGAAACCTCATATGTTTTATTTTAAGGCTTAATACTTCTTTTGGTCAAAGTGGTCCTACCGTTTTTAAAAAGTTCAAAGTAGTCCCAATTTGTGAAAAATCGGGTCAAGTTAATCCTTTTTGGTTACGACATCAAAATTTTAACGGTGCAAGTGCCCTCCTGGACAAAACATAATGAGGTATCCATTTTTTGTGATTGTGTGGTACTAAAGTTAAATGACGTGTTCAGCGAGAGGGGGAGGGAGCTGTGTGAGAGGACGGGGACTGGGAGGCTAACGAGCTCTTCAACGAAGTGAAGAACGCGTTCGACAGCTGTTGTAGAGAGACG


Gene Sequence:
>Vu_13678(-)
ATGAAGCTCGTCCTAAGTGGTGATGTGCCGTGTGTAATCTCTGACGATGGCAGTGGAGTGGATAGCAGCCCAAATCTTGCAATTTGGATTAGGGTTTTTGAATCTGGGTTTTTGTTTGATCTACGTTTGGGTTCCTTTGAGAGTTGGAATCCCGGCCGTAGAGCTGCGATCTTCTGGTGGTTCAGGACACGACGTCAAGGAACACCGAGCTATTTGGACCCAAATTACCACCACTCATTCTGGTTGATCGAGAAGAGCGACGTCTACAGTTTCAGAGTTGTGTTGTTGGAGCTTATCTCGGGAAAGAGAGCGGTGGACCAGAACAGAGACAAGCGCGCAATGGCGCTTGTGGATTTGGTTGTTTCCAGGATCCAGATGGGGCAGCTCCACCAAGTTCTGGATCCGGTCTTTAAACTCGGTGACAGCGATGGAGTTGCCGCCGTCGCAGAACTTGCATTCCGCTGCGTGACGGCAGATAAGGACGACCAACCGGATTCAAGGGAGATGGTGGACGAGCTGCGACAGGTGCGGAGTCGGACGTCGATAGTTAAGGAGTGAAATAAAGAGTGAAGAGCGAGAAGGTGGTTCCCAAGCGCGTTCGATTTCGACAGCGGTGGCATCAATGGCCGCCATGGCTGTGCGAGATTGAAGATGGAGGTTGGGTTTCCGGATATCATAAAGCTTGGATCCATGGCCGGGAGCCCCAATGACCTTGATGACCAACCACCAGGGGCTTCTCTCAGCTTAAAAGGCCCTATAATGGGTGTCGGGGGAAGCAAACCCTTCGTCAAGCACCACACCTACATTCTTCGGATTCGTTTTTGTAGGTTCTTGGTGGATGAGGCTCGATTTGGCCAACCCTTAGTGGTGGTATGA