Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13638 LG3 31951548 31954123 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 31951928 missense_variant p.Ser523Tyr
G/T 31952030 stop_gained p.Ser489*
A/C 31952031 missense_variant p.Ser489Ala
A/C 31952154 downstream_gene_variant
A/T 31952455 downstream_gene_variant
C/A 31952484 synonymous_variant p.Leu459Leu
A/T 31952499 missense_variant p.Ser454Arg
C/G 31952631 synonymous_variant p.Gly410Gly
C/T 31952878 missense_variant p.Gly328Asp
G/A 31953034 missense_variant p.Thr276Ile
T/C 31953035 missense_variant p.Thr276Ala
G/T 31953042 synonymous_variant p.Ser273Ser
T/A 31953093 missense_variant p.Arg256Ser
C/T 31953315 synonymous_variant p.Arg182Arg
G/A 31953326 synonymous_variant p.Leu179Leu
G/A 31953339 synonymous_variant p.His174His
G/A 31953375 synonymous_variant p.Arg162Arg
C/T,G 31953376 missense_variant p.Arg162Pro
C/T 31953414 synonymous_variant p.Gly149Gly
G/A 31953441 synonymous_variant p.Leu140Leu
C/T 31953485 missense_variant p.Val126Ile
T/G 31953487 missense_variant p.Tyr125Ser
G/T 31953512 missense_variant p.Leu117Ile
C/T 31953525 synonymous_variant p.Val112Val
G/C 31953542 missense_variant p.His107Asp
C/T 31953583 missense_variant p.Ser93Asn
A/T 31953633 synonymous_variant p.Leu76Leu
C/A 31953681 synonymous_variant p.Val60Val
T/A 31953684 synonymous_variant p.Leu59Leu
A/T 31953688 missense_variant p.Leu58Gln
C/T 31953723 synonymous_variant p.Gln46Gln
C/A 31953793 missense_variant p.Arg23Met
C/T 31953803 missense_variant p.Ala20Thr
T/C 31953853 downstream_gene_variant
A/G 31953866 downstream_gene_variant
T/C 31953870 downstream_gene_variant
G/A 31953872 downstream_gene_variant
T/A 31953878 downstream_gene_variant
T/G 31953880 downstream_gene_variant
G/C 31953887 downstream_gene_variant
G/A 31953899 downstream_gene_variant
A/C 31953900 downstream_gene_variant
A/G 31953907 downstream_gene_variant
T/G 31953912 downstream_gene_variant
T/A 31953936 downstream_gene_variant
T/A 31953944 downstream_gene_variant
T/A 31953945 downstream_gene_variant
A/T 31953950 downstream_gene_variant
C/T 31953951 downstream_gene_variant
T/C 31953958 downstream_gene_variant
C/G 31953964 downstream_gene_variant
G/C 31953967 downstream_gene_variant
A/G 31954005 downstream_gene_variant
A/G 31954021 downstream_gene_variant
C/A 31954026 downstream_gene_variant
C/T 31954050 downstream_gene_variant
A/G 31954065 downstream_gene_variant
T/G 31954066 downstream_gene_variant
C/A 31954094 synonymous_variant p.Val10Val
A/G 31954103 synonymous_variant p.Ile7Ile
C/T 31954107 missense_variant p.Arg6His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13638.1
MFFKLRIAAVCVLKGNKWTAETRQPVPFQPLISGTLIQQVNLMMLQSYFSTIPIFLLLLVFPQTKADLHSEKQALLDFAAALHHGPRVNWNSSTSICTSWVGVTCSHDGSHVLSVRLPGVGLRGYVPPNTLGKLNGLISLSLRSNSLRGNLPSDLLSLPSLRFVYLQHNNFSGHIPDSLPPRLIFLDLSYNSFTGQIPDSIQNLTHLIGLNLQNNSLSGSIPNVNLPTLKILDLSFNYLNGSIPSCFRKFTGSSFRGNMMLCGAPLKHCSSDSTSTTLSPSTVSQRPSDPSNRKMNKGAKIAIILGVVTSLFLPGLMVVFCCFKKKVGEQNVAPAEKGQKLKEDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLKEVAMGKKEFEQQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYCTAGSFSKLLHGTRETGRAPLDWDSRLKIVVGAARGVCHIHLANGRKLVHGNIKSSNVILTIDLQGCISDFGLTPLTNFCASSRSPGYGAPEVIEQRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEEVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDSRPSMVEVVRTIEEIRACIY*


CDS Sequence:
>Vu_13638.1
ATGTTCTTTAAGCTTCGCATTGCTGCTGTGTGTGTGCTCAAAGGAAACAAGTGGACTGCTGAAACCAGGCAACCAGTTCCATTCCAGCCTCTCATCTCAGGCACCTTGATTCAACAAGTAAATTTGATGATGCTACAGTCCTACTTTTCAACAATTCCAATTTTCCTACTCCTGCTAGTGTTTCCTCAAACTAAAGCTGATCTACACTCAGAAAAGCAAGCTCTTCTTGATTTTGCTGCTGCACTTCATCATGGTCCAAGAGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTGGGAGTTACATGTAGTCATGATGGGTCCCATGTGCTTTCTGTGAGGCTTCCAGGTGTGGGACTGCGCGGTTATGTCCCACCAAACACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAAGTGACCTACTTTCCCTTCCTTCTCTGCGCTTTGTATATCTCCAACACAACAACTTCTCAGGTCACATTCCTGATTCACTGCCACCCCGGCTTATCTTTCTTGATCTGTCCTATAACTCTTTCACAGGTCAAATTCCAGACTCAATCCAAAACTTGACACATCTAATAGGACTCAACCTCCAAAACAACTCTCTCTCAGGATCCATTCCTAATGTTAACCTCCCTACCCTTAAGATTTTGGATTTAAGCTTCAACTACTTGAATGGTTCTATTCCTTCATGTTTCCGTAAGTTTACTGGCTCCTCATTTAGAGGGAATATGATGTTATGTGGAGCACCTTTGAAACATTGTTCTTCAGATTCCACTTCTACCACATTGTCTCCATCAACAGTCTCTCAAAGACCAAGTGATCCATCAAACAGGAAAATGAACAAGGGGGCAAAAATAGCAATTATTTTGGGGGTTGTCACTTCGCTGTTTCTTCCAGGTCTTATGGTAGTGTTTTGCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTTGCACCTGCAGAGAAAGGTCAGAAGCTTAAGGAGGACTTTGGTAGTGGTGTGCAAGAACCTGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTGCTTGGGAAGGGAAGTTGCGGAACGACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAAAGAGGTGGCAATGGGGAAAAAAGAATTTGAACAGCAAATGGAGATTGTTCAAAGACTTGATCATCACCCAAATGTGATTCCCCTCCGTGCTTACTACTACTCCAAAGATGAAAAATTAATGGTTTACGACTACTGCACAGCCGGAAGTTTTTCCAAGTTACTGCATGGAACCAGGGAAACTGGACGAGCTCCACTAGATTGGGATTCAAGATTGAAGATTGTGGTTGGAGCTGCAAGGGGTGTTTGTCATATTCACTTAGCCAATGGAAGGAAACTTGTCCATGGCAATATAAAATCATCTAATGTGATTCTCACAATAGATCTCCAGGGCTGTATATCAGATTTTGGCCTAACTCCCCTGACAAATTTCTGTGCCTCCTCTAGAAGTCCAGGCTATGGAGCACCTGAAGTTATTGAACAAAGAAAGTCCACCCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGAGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGTTAATGAGGTATCCAAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACTCAAGACCCTCAATGGTGGAAGTTGTTAGAACAATAGAAGAAATTAGAGCTTGCATTTATTAA


Promoter Sequence:
>Vu_13638::LG3:31954123-31956123(-)
CAAACGGAGATTGGACCCACAAAAATTTGAAACACATGGTTTGCAGGCTTACCATACTTTAGTTGTGGTCCTTTGGTCCTCCACATTCCACACATCATTTTCACTTACAAGAATGCAATGCTACACCATTTCAACACCAATGATTCTGTTTCTGCATGAGTGACCCTTGTCACAAACACAATGCCATATTACCATTTCCATTCCCATGCACAAGCCCTTCCAACCCTTCATTTAATGCAAAGTTGGAATCCAAAGAGAAAAACAATTCTATTCAAAGTCACAGCAGAAAGAATAAATTAAGTCTTTAGATATCAGCAAATTGTTACTCTGAATGATAAAAGATTCAGTTTTCTTAAACAAGTTTTCGAGTTTGAGTATTGTGAATGAAAAAACATAATTGAAAGAGAAAATCCTACAAAAGGGTACTCAATCAATTTCTTCCACAGAAATTAATCATCTGATATGTTTAACCCTTTTATGATTTTGTAAAATCCACGGAAACGTTCTTAGTCCTATTCAAAAACACTATATTCACATCCATGTAAATGAACCTTAAATATAATATATACTTTAAATTGGTCTTCAGAAACTTCTAACACAACCAAACACCAATATTCAAATTAAACCACTTTAACAGTTTTACCTAGTTTGAATAGAAAAAATGGTGTGAATAGTATTCCTAAATTGTTGTGTACCTTTTAATGTGTATCTAAAGCTCTTTTCTTAACTGTTTGCCCCATATATTTCACGATCCAGATCAAGTGAATCATTGGCGCTACTATTGTACCACGAGTTTTAGGTACTTAATATGAATAACAGATAACATCCCTTTATGAGTTAAATTAAACAATAAATTGGAAAAGTTAATTTTTGGATTAAACAATATGGAAAAATCTTAAACTTATCACCCTTAAGTTGCCCTTGGTGATCAAGAACAAGTAAAACTGGGGTAAATTAAGTTGTGTAACTGTAACTGAGGTAAGGGTCAATTCATTGGAAAATGGGAAACCGAAGGAAATCCATTCCTTTTCATCGAGATCTACAAGTTAAAATAGTGTCACAAGTTGCATTCAATAGTTCAAATATTAATTTATTTTCTGTAAAAAGAGTCTTGATCTTATTCATTCCTCATAATACCTTCCAAATAAATAGTTTAACAGTATAAAATTTCACCCTTAAGTATTTTTTAGATACCATGGTTATCCTGTGTTCATAGTTGGAAAAAGGATTGGAGTAGTGATTAGACACATTGTATTTGTACATTACAGAAATAATTTATTTAGCAAGAAATCTGGTGTTTGACTCATACGAAAACTTGTCCAACTTATAATATCAAGACAAAAAACAAGAGGAGAATCATTACGAGTATTTCACAAAGTTACATGCACAAAATCTAGAATTTTTAATTCATAACTTCAATAGTACGGTGAATCATATTTAGATTAAATTATTGTATTGGTCCCCGAGTAATTAAATTGGTTTATGGTGTGTATATATACTATATTATTACCATATGTATTACCACTATACTTTGCAGGTTTGGCTTAATGAGGAAGAAGGCTTGAAGTTGAAGCTGAGACTTGAACGTTGCCATATCATAAAGAGGAAAACCAAAAGTAAAATCTATACACAGTACTGTAGCATTGTATGATAGTTATAGTATGCTGCTATAATGCTTTGAATATGCTTCTCTTTCTCTCTGTATCTCTGGTTTTGTGTGTATGTGTGTGGATTCTGGCGTGTTCCTGAAGCTATGCCGTTAAAGCTTGTCTTTGCTTCCTCTTGGCCGTTAGTACCACCAATTACCAAGACCACATTGCTTTAACAAAGACTTTTTGTTTCTCAAAACCACATTTATACATTTTTCAGCACTTAATACTCTGCTCAACACTCCCTACTGTGGATTCCTCTTCCAGCTTGCTTTCCCTTTCTCCTGGTTTCAAGGTTTTCATCTCCCAATTGCTTTCATTTTTCTCTTCATTTTAGTTTTTAGCGAGTTC


Gene Sequence:
>Vu_13638(-)
ATGTTCTTTAAGCTTCGCATTGCTGCTGTGTGTGTGCTCAAAGTGAGTACAATGTTTATGGTGAATCCAAGGAGAATATTCTTTTAATGAATAAAGTGCTTTTGAAATTGATTTTAGCTAATTTTGTGGACTTCTGTTATTATATGTAATGATGTTCTTGTCTTCAAAAAATGTGAAAAATTTTAGTACAGCTTAACTAAGAACTCAAAAAACTAATTGTTTTTCTGCATTGCATGCTTGGTTATATGTTACAATTGTTCCTTTTGATCAATGTGTAATATTTTGTGTGAAATCTGAATTGCTAGGGAAACAAGTGGACTGCTGAAACCAGGCAACCAGTTCCATTCCAGCCTCTCATCTCAGGCACCTTGATTCAACAAGTAAATTTGATGATGCTACAGTCCTACTTTTCAACAATTCCAATTTTCCTACTCCTGCTAGTGTTTCCTCAAACTAAAGCTGATCTACACTCAGAAAAGCAAGCTCTTCTTGATTTTGCTGCTGCACTTCATCATGGTCCAAGAGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTGGGAGTTACATGTAGTCATGATGGGTCCCATGTGCTTTCTGTGAGGCTTCCAGGTGTGGGACTGCGCGGTTATGTCCCACCAAACACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAAGTGACCTACTTTCCCTTCCTTCTCTGCGCTTTGTATATCTCCAACACAACAACTTCTCAGGTCACATTCCTGATTCACTGCCACCCCGGCTTATCTTTCTTGATCTGTCCTATAACTCTTTCACAGGTCAAATTCCAGACTCAATCCAAAACTTGACACATCTAATAGGACTCAACCTCCAAAACAACTCTCTCTCAGGATCCATTCCTAATGTTAACCTCCCTACCCTTAAGATTTTGGATTTAAGCTTCAACTACTTGAATGGTTCTATTCCTTCATGTTTCCGTAAGTTTACTGGCTCCTCATTTAGAGGGAATATGATGTTATGTGGAGCACCTTTGAAACATTGTTCTTCAGATTCCACTTCTACCACATTGTCTCCATCAACAGTCTCTCAAAGACCAAGTGATCCATCAAACAGGAAAATGAACAAGGGGGCAAAAATAGCAATTATTTTGGGGGTTGTCACTTCGCTGTTTCTTCCAGGTCTTATGGTAGTGTTTTGCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTTGCACCTGCAGAGAAAGGTCAGAAGCTTAAGGAGGACTTTGGTAGTGGTGTGCAAGAACCTGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTGCTTGGGAAGGGAAGTTGCGGAACGACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAAAGAGGTGGCAATGGGGAAAAAAGAATTTGAACAGCAAATGGAGATTGTTCAAAGACTTGATCATCACCCAAATGTGATTCCCCTCCGTGCTTACTACTACTCCAAAGATGAAAAATTAATGGTTTACGACTACTGCACAGCCGGAAGTTTTTCCAAGTTACTGCATGGTAATTACTCTTACTTTGAACCTTTCCCTGATTACAAAAGGCTCTAGGTTGATATTTCTCATAACTTTAATTTCTGATTGCATATGTCAGAACAAGATATACCACCATATGGTGTCAAAATTACTATCTACGCAGTCATGTTTTATGCTTTACATACATATAGTTTTAATTTCATGTCGGGTTTGTAAGATCTTAGTATCAGAACATGCCTAAATATTACTGTCCACATTATACAAAGTGCTTATCTTATGCCGTTGTATTAGAGGTGCTTGAAGATAAATTTTATGTAGATATGAAAATGGTTAAATGCATTGCCATTGTTGTGTCCTTTTTCATAATATGACTTATGAAACATGGTGACAGGAACCAGGGAAACTGGACGAGCTCCACTAGATTGGGATTCAAGATTGAAGATTGTGGTTGGAGCTGCAAGGGGTGTTTGTCATATTCACTTAGCCAATGGAAGGAAACTTGTCCATGGCAATATAAAATCATCTAATGTGATTCTCACAATAGATCTCCAGGGCTGTATATCAGATTTTGGCCTAACTCCCCTGACAAATTTCTGTGCCTCCTCTAGAAGTCCAGGCTATGGAGCACCTGAAGTTATTGAACAAAGAAAGTCCACCCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGAGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGTTAATGAGGTATCCAAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACTCAAGACCCTCAATGGTGGAAGTTGTTAGAACAATAGAAGAAATTAGAGCTTGCATTTATTAA