Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13636 LG3 31928633 31931010 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 31928704 synonymous_variant p.Leu24Leu
C/T 31928708 stop_gained p.Arg26*
T/C 31928754 upstream_gene_variant
T/C 31928798 upstream_gene_variant
G/A 31928799 upstream_gene_variant
A/G 31928812 upstream_gene_variant
C/T 31928816 upstream_gene_variant
G/A 31928876 upstream_gene_variant
G/T 31928910 upstream_gene_variant
T/C,A 31928949 upstream_gene_variant
T/C 31928971 upstream_gene_variant
G/A 31929143 upstream_gene_variant
C/G 31929165 upstream_gene_variant
G/A 31929216 upstream_gene_variant
T/C 31929222 upstream_gene_variant
G/A 31929316 upstream_gene_variant
G/A 31929359 upstream_gene_variant
T/C 31929398 upstream_gene_variant
C/T 31929454 upstream_gene_variant
G/A 31929483 upstream_gene_variant
C/A 31929503 upstream_gene_variant
A/C 31929516 upstream_gene_variant
T/C 31929540 upstream_gene_variant
G/A 31929582 upstream_gene_variant
C/A 31929614 upstream_gene_variant
C/T 31929646 upstream_gene_variant
C/T 31929705 upstream_gene_variant
A/T 31929747 upstream_gene_variant
A/T 31929752 upstream_gene_variant
T/C 31929872 upstream_gene_variant
G/A 31929876 upstream_gene_variant
G/A 31929904 upstream_gene_variant
T/C 31930013 upstream_gene_variant
C/T 31930093 upstream_gene_variant
C/T 31930110 upstream_gene_variant
G/A 31930111 upstream_gene_variant
C/T 31930134 upstream_gene_variant
G/A 31930167 upstream_gene_variant
C/T 31930177 upstream_gene_variant
C/T 31930215 splice_region_variant&intron_variant
A/G 31930330 upstream_gene_variant
A/G 31930486 upstream_gene_variant
A/G 31930623 missense_variant p.Lys91Arg
C/T 31930636 synonymous_variant p.Gly95Gly
G/C 31930904 missense_variant p.Val156Leu
C/T 31930920 missense_variant p.Ala161Val
T/C 31930964 synonymous_variant p.Leu176Leu
C/G 31930999 missense_variant p.His187Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13636.1
MIEGLRCVDHEQSEQRLSDGKQSLKRHRKHKRKKLETFQFDFDLEEEGSLLDGTVVAVKRFLESNFQRDVEFCNEVEIITNLKHHNLVPLRSCCVAEESDNYDERGSQRYLMYDYMPNGNLKDHLFVSSNSPNAKGSLTWPERKSIMLDVAKGARIGDFGLGKQSREGQSHLTTRVVGTYIYLGPQYALYG*


CDS Sequence:
>Vu_13636.1
ATGATCGAAGGGCTAAGATGTGTGGATCATGAGCAAAGTGAACAGAGACTGTCTGATGGGAAGCAAAGCCTAAAGCGACATAGGAAGCACAAGAGGAAAAAGCTTGAGACTTTTCAGTTTGATTTTGACCTTGAGGAAGAAGGGTCCTTGCTTGATGGGACTGTGGTGGCGGTTAAAAGGTTTTTGGAATCTAATTTCCAAAGAGATGTGGAGTTCTGTAATGAGGTGGAGATTATTACCAACCTGAAGCATCACAATCTGGTGCCTTTGAGAAGTTGTTGTGTGGCTGAGGAGAGTGATAATTATGATGAAAGGGGAAGCCAAAGGTATCTTATGTATGATTACATGCCAAATGGGAACCTGAAGGACCATCTGTTTGTGTCATCAAACTCTCCAAATGCGAAGGGATCATTGACATGGCCTGAGAGGAAAAGCATAATGTTGGATGTGGCAAAGGGGGCAAGAATTGGTGATTTTGGTCTTGGCAAACAAAGCCGAGAGGGTCAGTCTCATCTCACAACCAGAGTGGTTGGAACTTACATATATCTAGGTCCACAATATGCACTTTATGGTTAG


Promoter Sequence:
>Vu_13636::LG3:31926633-31928633(+)
ATTAGTGCCCGATTTCCTGCAATGAGAAGGAACACTACCACAGCCTTAATTTAAAACCGATGCATGTTTTTTCCTGCAACATAGACATAATTTATACTATTCTTTATTTACCTAATTTTACTTTACTCTACAATGGTCAGTGACAGTCCACGCGTTCAAGGCTTTCAAAATGCAGCAGAAACAACAATTTTTTAGTTTTACAAGATTTTTTTTTTCATTTAACCCCTGAACAAACACAAACCCAGAAAAAAAACGATTTTTTTACAGCACAGTTAGAGGAGACAAAAATATCGTGGTGGGGTGTGAAATGAAGAAGAAAAAGAGATACCAGCGCTGCAAGAAGTTGGTGGGTCTTTCTGCAAGTCCTTGAGCTCCTTGAGGATGCGCTTGGAAGCCATGGGTGAGACGATACACGTTCAGATCTGAAAGAGAAAGAGGGATCAGAAAGAAACCCTAGAAATGTGAGTAAAAAAATAAAGAGAGAAATAGATAGAGAAAAGAGAGAGACATGGTGTTGGTGTGATGCTGAGGTGGTTGGATGATCAGGAATGAGGGACAGATCGAAATGGAAGAGGAAGACACGCAGCGTCAATCCCTCGGCTTCCCAATCCCAAACCCTCTCTCTCTCTTTCTGAAACCCTTCTCTCTCACACGCCAATACTCACAAAATGCCCCTTTTTAGATTGATTTATACTCACCCAAATGACATCTATGTCCATTTCCTTTTTCTTTATTGCACCCTTTGTCCCCATATTTTCAACATAGCCCTTTTAATGAATACTAATTACGTAGAAAAATCCAGAATTATGATAATGTTTCTTTGAAACATATATTCTAGGGTTTCATTCAAAACTAGCACCAACATCATAGACTAACAATGCTGACTTTTATAGTGAGATGTTTTGACGTGGGAAAGTTACATTCCCAGTTCAAGAATATGTAAGAATGGAAAGAAATTAAAATATGTTGCTCAATATTTACATATTAAAGAAAGAATAATAAACATTGGTTTTGAAATACCAAATTATATTGGTTTTATATATATTCTTTTAAGTTAAAAATATTTGTCTCATTTATTATACACAATTTTCTATTCATGACAAAAAAAAATATAATTTTTTTTCTAATATAATCAATAAAAGTGAAAATATATATTTTTACACTCGAGTGATACTAAATTAATAATAATTTATAAAGATGACATAAAAAGACAAAACATTAATTCAGAAAACTCCTTTGAATATTTTCATGCAAATCGCGGTAAAGGAATGCATGGTTGATAACTCCCTATTTTTGCACTTTTATTTGTGTTTAAAAATCTTTCTTATTGTCTTTTAGTCTTTAATTGTCTACAATTAGCATAGTTTTAGGTTTTTTTCTTTAATTCTTTAGTTTTAGTTTTATAAAATTGTAGTTAAAATTATACTTTTAGGAGTATTTTTTATATTTGTAAATAATTAGGAAATTAATTTTTTTAAGACAATCTTATAATAAAAAATCTTTCTTTTTAATTGATAAATTGTGTTCCCTTTCTTTAATTATGGACTATTTTTTTCTGCATACCTGGGTCTTAATCAATTGACTAAAATGTGTTTTTTTTGTCAAATTGAGCTGGTTATTTGGAATTGGGTTTGCTGCTATGATTGGGCCCATTCAAATTTACACCATATTGGGCAGGTGCACTAGGCTGGACCTTTAAAATGATGGGTATGTTGTTCTGCACTTCTGCGTTGGAATTGGGCCTGCTGTTTTGCACATCTTGAACTGCTAGAATTGGGTTGCATTGATGGGCCTATGGATTGGTGAAGTTGTGCATTTTGTAAAAGCTTGGCAAAAGATGTTTTGCAAGGGTTGCTCAAATATGTGCCTCATTTGGAGAAAAAAATAGAGTTCCCCTCGAGCTAGGGCTTTACGCAAGAAGAAAGGAGAAGATGAAGTGAGCTCGAGTCACTTACCCAATGCATGTGTGGAGGAGATTGAATCAGTGAAGAGGTTGAAGA


Gene Sequence:
>Vu_13636(+)
ATGATCGAAGGGCTAAGATGTGTGGATCATGAGCAAAGTGAACAGAGACTGTCTGATGGGAAGCAAAGCCTAAAGCGACATAGGTTATATATTTTTTTTTCCTTTTTGCTTTTCTCTGGTTTGGACTCTATAAAAGGGTATGTAAATAGCTTTTAGAGGTTGTAATGTGGAGGGTGATAAACTCCATGAGAAAGATGAGAGACAATCTGAGTTCGCTAGGTTTTAGGGTTTTACGTGCTTTTCGTAGTGTAGATTCCGGATTCTTTGGCTTTTGATTGAGGCTCATGGTGGTGACAATCCGTGGTAGTCTTGATTGTTATTTTCTTAGTGACTTTTCCTTGTAATTTATAGTTTCATTTTAATGAATTTTAATTATGTTGTACTGATTTTGTTTTGTTTCAATTCTGATTCTATTTTGAAATTGATGCAATTTTCGTGCTTTCTATTGAATTCACAAATGAAATGTTATTCCTGTAGATGAGTGAATTCACAAACAAAGAAACCTCCTTTGTTCAACCTCAATTTCCTCTTTCTTCAACCTCAATCATACAACCTACACAAAAAACCCTAAAATCTCAAATCAGAAAACTCCTAATCTGTAAAAACTCAAATCACAACATCACTCCACCATATTCATTTTTTACACCTCGAGACAGCCTTGTCATTCATTGTGAGAAGCACCTGCAAATAAGGGTCATCCCACCTCCCCTCGAACCACCACCTTGTGAGGAATGCGAAAATCCTTTGTCCCATGTCTTCGAACAATAAGAACAACTTTGTGAAGAAGTCATTCATAACCCTGACCCTTTGTTTTTAATTTTCGAAAGAAAACTTTCCTAACTTTAGGGACGAACTTGCACAAACCCTAACCTTTTACTTTTAAACAATTACTTTAATTTTAAAATTTTCACACACATTGCAAAGTCATTTCAACTTAGGGTGCCACGTAGTGAATAAATGTACAAGTCATTCAGTTTTCGCCAGGGGGCAACTCTGTCGCTAGTTTTTAACGTCGCAAGCAAAAAGGACTAACATGAATCGTTTTTACAAAGAGTAGTAATAGGTTGACATGCCTACGTGTCACTTACACTCATTTGACACAGTCCAGGTCAGCATTTTAAAAAAAATTGCATACTGATTAAGGGTAAAAGTGGAAAAATGTAAATTGGGTTTCGGTTGTCAGTCCAAAATCCCATTTAGGTTTTGTTTCAAAAAGCATTCTCCATCGTTCTTCATTAGTGCAGTTGCTTCCCATTTCTATGTTTGAGGCGGTTCAATCGTTGGTTGTGGAGGCTTTTGTGGTTGTGAAGTTGAGGGTTGTGGAGGTTTTCGGTTGGCGTTTCGATTTTTCTCGCGTCTGTCGTGTGTGGCTTTAAGGTATGGGGTTTTGAGTTTTCTTTCTGTCGTAGCTTCTGTAGTTTTTGTCGCTATGTGTAGATAGCTTGTATGTGATATTTTAGCATTTCGGTCTATTGACCGGGGGTTATGGGTGAAAGAGTCACCAGGCTCTTGTTTTTGGGTTGACGGGAGCTAGGGTGGCTTTGCTAGTGATGTCTTCTCTATTGGGGCTTTATGTGTGGTGCGACAGGAAGCACAAGAGGAAAAAGCTTGAGACTTTTCAGTTTGATTTTGACCTTGAGGAAGAAGGGTGTAGGCGTATATTGAGGCCTAATATGGGGTCGATTTGGTTAAAATTTAGGGAGCTTGAGATAGCCACTGATAATTTTTTCATCTAAGAACTTGGTTGGTCGTGGTGGGTTTGGGTTGGTTTACAAGGGAGCCTTGCTTGAGATAGCCACTGATAATTTTTTCATCTAAGAACTTGATTGGTCGTGGTGGGTTTGGGTTGGTTTACAAGGGAGCCTTGCTTGATGGGACTGTGGTGGCGGTTAAAAGGTTTTTGGAATCTAATTTCCAAAGAGATGTGGAGTTCTGTAATGAGGTGGAGATTATTACCAACCTGAAGCATCACAATCTGGTGCCTTTGAGAAGTTGTTGTGTGGCTGAGGAGAGTGATAATTATGATGAAAGGGGAAGCCAAAGGTATCTTATGTATGATTACATGCCAAATGGGAACCTGAAGGACCATCTGTTTGTGTCATCAAACTCTCCAAATGCGAAGGGATCATTGACATGGCCTGAGAGGAAAAGCATAATGTTGGATGTGGCAAAGGGGTTGGCCTATTTGCACTATGGAGTTAAACCTGTAATTTTCCATAGATATCAAAGCCACTAATATTCTACTTCATGCGGATATGAGGGCAAGAATTGGTGATTTTGGTCTTGGCAAACAAAGCCGAGAGGGTCAGTCTCATCTCACAACCAGAGTGGTTGGAACTTACATATATCTAGGTCCACAATATGCACTTTATGGTTAG