Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13505 LG3 29416745 29419757 PREDICTED: probable WRKY transcription factor 33 isoform X1
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
A/T 29416754 3_prime_UTR_variant
G/T 29417478 missense_variant p.Thr417Lys
G/A 29417831 downstream_gene_variant
T/G 29418523 missense_variant p.Glu138Asp
A/G 29418577 downstream_gene_variant
A/C 29418648 downstream_gene_variant
G/T 29418824 downstream_gene_variant
T/G 29418851 downstream_gene_variant
C/T 29419214 missense_variant p.Ala81Thr
T/C 29419342 missense_variant&splice_region_variant p.Asn70Asp
G/A 29419379 synonymous_variant p.Ser57Ser
G/A 29419383 missense_variant p.Pro56Leu
G/A 29419405 missense_variant p.Pro49Ser
T/A 29419502 missense_variant p.Lys16Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13505.1
MTMGDHNSNWGTSEFKHHQLGLDVPKFKSAQPPSLPLSPSPPSPSSYLPFSSAFSPSEFFNSSLFLPSPNIFASPTTEALAAQTFNWRNGSGEEEQQRDKEDEKNYSDFSFQTQIQSSSGMLQVQEPLKKQDMWKFNEPSKQTDYSSERTATKSEYPPIQSFSAEMASHKSELQSNSVPGSGRFNYANASQSVREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPNCSVKKKVEKSLDGQITEIVYKGHHNHPKPQSTRRTSSQSIHQPSSSCTNSGISDQSVVTLGNPQMDHFSMKEDSSASVGEEEFEQTSQTSYSGGDEDNLGPEAKRWKGDNENDDYSASGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSASYNMNRNPVNSSISAPIRPSAVNCYSNSSGFKNSLYNNTKLPATRNQESFALDKFQNPGNFGQSALNKSMSSYTDHAPYSHATYSNAKDERKDDSFLQSFLSKDF*


CDS Sequence:
>Vu_13505.1
ATGACCATGGGTGATCATAATAGTAACTGGGGAACTTCTGAATTTAAACATCATCAACTTGGACTTGATGTTCCAAAATTCAAGTCTGCTCAACCTCCTTCTCTACCTCTCTCTCCCTCTCCCCCTTCCCCTTCTTCTTACTTGCCCTTTTCATCTGCTTTCAGCCCATCCGAGTTCTTCAACTCTTCTTTGTTTTTGCCTTCTCCAAATATTTTTGCATCTCCTACTACTGAGGCTTTGGCTGCGCAGACCTTCAACTGGAGGAACGGTTCAGGAGAAGAAGAACAACAACGTGACAAAGAGGATGAGAAAAACTACTCGGACTTCTCTTTCCAAACCCAAATTCAATCTTCCTCAGGCATGCTTCAAGTGCAGGAACCTCTTAAGAAGCAAGATATGTGGAAATTCAATGAACCTTCAAAGCAAACTGATTATTCATCTGAGAGGACAGCAACAAAATCTGAATACCCTCCGATTCAGAGCTTTTCCGCAGAAATGGCATCGCACAAATCAGAATTACAAAGCAATTCAGTTCCTGGGTCTGGTCGTTTTAATTACGCCAATGCATCTCAGTCTGTTAGAGAACAAAAGAGATCGGAAGACGGATTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTACAAATGCACACATCCAAATTGCTCTGTGAAGAAGAAAGTTGAGAAGTCTTTGGATGGCCAAATTACTGAAATAGTGTACAAGGGCCATCATAACCACCCAAAACCACAGTCTACTAGAAGAACAAGCTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCTGGGATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAAATGGATCATTTCTCCATGAAGGAAGATTCTTCAGCTTCTGTAGGAGAGGAGGAGTTTGAACAAACATCCCAAACCAGTTATTCTGGGGGAGATGAAGATAACCTTGGACCAGAGGCAAAAAGATGGAAAGGAGATAATGAAAATGATGACTATTCCGCCTCAGGGAGTAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTGAAAGGAAATCCAAATGCAAGGAGCTATTACAAATGCACTGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCGCATGATATCAAAGCTGTGATCACAACCTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGTGGTAGCGCAAGTTATAACATGAACAGAAATCCTGTGAACAGCAGCATATCGGCTCCTATAAGACCCTCTGCAGTGAACTGTTATTCCAACTCATCAGGTTTCAAAAATTCTCTCTACAATAATACCAAACTTCCAGCAACCAGAAATCAGGAATCTTTTGCACTGGACAAGTTCCAGAACCCTGGAAATTTTGGCCAATCGGCTCTCAACAAATCAATGAGTTCATACACGGATCATGCACCGTACTCACATGCTACATACTCAAATGCCAAGGATGAGAGAAAGGATGACTCCTTCCTTCAGTCATTTCTGTCAAAGGACTTCTGA


Promoter Sequence:
>Vu_13505::LG3:29419757-29421757(-)
ATCCGATTCCAAGGCCTAGCTCACTGTTACAAATAAAGCTTATATTAAGGAAGTATGACAGTTACACGATGAACCTTTACTGTAACAGTATTAATATTCCCTTTAAGCCTTTGTGCTGCAGTTTCACTGTCAATGCCAACAAGCCTCTCACCTGCACAATCCAAATATTTTCAAACAAAGAAAATCACACCTGCTTCACCTGAGAGATTGCATCTCTATCTCCTGATTAAGTCTGACAGTGACAGCAGCTGAAAAATTATGAAGCATGCAAACCAGAAAACTGTTTTGAGGACTTTAGGAAGAGACTCGGGATAGTGTTATATTATGCCTCAAACTAAGATATGATATTTTCCATAATACCTTTTTCTACCTCAATTTAATCTATTCAGTATTAACATTACTAGCACCTTTGAAAAAATCATATAATAAATGGTTTTCAATGATAAACTACAGAAAATTAGATGATAACAAGAAGAAAAATATATATACATGATCAATACCATTTATCTCAATCAATTAATCTCTTTGATGTATACCAGCATGAGCAGTTGGACTGTCATTTATGCAAGACAATACAATATGTGATTTTAATTAAAATAAGTAATTAAGATATTATTTTATATTACTTTTTTTTATTAATTAAAATTAAAATATTATAATACTTTTATTATTGAAGTATTTTGATAAACTTATTCTAACATGTAAAGACTGAATATGGACTGAAGAAGTGATTTGAGATATGTTAAGTATTAGTATTAATATGACAGACATACTTAATACATATTTTTTAGAAAAATATCATAGATATTCTTTATAAAATATCCTATATAAATCTATACAACGATCACACAGACAAATTTTTCTATAAGTTTAGAAGATAAACTTAGAAAAAAAATTATTTTCATTATATTTTGGATGACTGTTCATATGAGATATATATGATTTAATTTTGAAGTTTTTGTTAATATTTTAATGGACAACACCATCTAAGAGAGAATGGTGTTTAATTCTAACTTTTTGGGATGTAGAAAATTACACATTAAGATTGTCAAAATTTTAATGATGAGAAACAAAAAGGTCCTACCGGGAGTCGAACCCAGGTCGCTGGATTCAAAGTCCAGAGTGCTAACCACTACACCATAGAACCATTTTTGCTTATGAAGATACACTTTACTAAAATAACTTAAACTTCGATCTTAAACATACATGAAAGAACATAAATTAAATGACAGTTTATATATATATATTTTAATGCTGAACTACTTACAATATTTTAGCCAAATATTTTCTATTATTAATTAAAGTGATGTATTCTCCCTTATCTCTTTGGGTAACTCAAGCCAACAAGAAATCTTTAGGCATATAAACAACTAAAAAAGAAACGTCTATAATTATTTAACCAATTTCGGAAGTGAAAAACAACCTAAGGCTCCTCAAACAAAACGGTCCAATAAATAATTGAAGATAGACATTGAATATTTAGGTTGTTTCATAACATTAGATTTCTGACATTTGCACCAAATAATCACACACCAACACAATCCAATAACAGATCCTATTTTTACAAGCCGCCGTTCCCTCAATAAAAGTAAAATCTTTTTGTCTGCTATTTGACTCACTAATTTTCTCCCAACTATTAAGATTTACTAACCCTTTTTACAAAAATCTGTTTAACTTTCAAAGCTAAAAACTTTACTCTTGTTTAAGTTTCCTGAATATGAATATTTTTATGTGTATTTGAGATCAGAAAGTGGTTATGATAGTAATATATCTTGAGATAAAAATGATTAAAGATAAAAATAATCTTAATCCATATAGTTATTTCTTCTTATATATACAAAATCATCCAATAATTGTGTTATAATGGAACAAGGGTGGTAGCAAGTAGCTGGCAGGCTGAGGCAACCCAGTCAAACCCACAAGTCTTGACCCAATTGAGCTTTCCACGGTCAAACATTTCTTCACCTTCCTAGAAGCACCTTCCAAGACTTTTTTCTGGT


Gene Sequence:
>Vu_13505(-)
GATTTCAAGCTTTGCCAAAAAATCTTGCACCAATTCCCTCCTATATTATCACTATTAACTTCTGTCTCCTCTCCTTATATCATGCCACACACCACTTTCTGTTTTTCCAATACAAACTAAAAACCTACCAACCTTTTCTTCCCTCAAGAAGATATCTTTCACTCACCTTCTTTCCAACAATTGTAACAAACAACAATACTATAGTAACATGACCATGGGTGATCATAATAGTAACTGGGGAACTTCTGAATTTAAACATCATCAACTTGGACTTGATGTTCCAAAATTCAAGTCTGCTCAACCTCCTTCTCTACCTCTCTCTCCCTCTCCCCCTTCCCCTTCTTCTTACTTGCCCTTTTCATCTGCTTTCAGCCCATCCGAGTTCTTCAACTCTTCTTTGTTTTTGCCTTCTCCAAATGTAAGTTACAAGCTTTCTCATGTAAATAATCTGCTCTGGTTTGGTTTCATCACTAATTGTGGGGTTTTCTTTGGTGTTATGTGTGTGGTTTTTAGATTTTTGCATCTCCTACTACTGAGGCTTTGGCTGCGCAGACCTTCAACTGGAGGAACGGTTCAGGAGAAGAAGAACAACAACGTGACAAAGAGGATGAGAAAAACTACTCGGACTTCTCTTTCCAAACCCAAATTCAATCTTCCTCAGGCATGCTTCAAGTGGTGAGCACTGTTGTCTTTTTGTCACTATTTCACTTAAACAAGTGTTATTTTCTGTGTCTTTTTGGTTAATCTTTGATCATCAAATACACTTGCAGGCTGGTTGTTGTTCTCTTTTCTGTTTAGACATTTGGACTCGTTTCTAATGTTAGCTTCATAGTTTTTCTTTTTGTCTCGGATCGCTTTGTGGGGTCAGTTTATTGTTTACTTGTTTTTAATGGTCCTTTGTATTATATTCTTCTTCTTTGTTAATCTTATCTCCCTATTTTATTTTTGTTGGCATAAACACGGTTTGAACGGTTAAAAAAGAACTTGCATAGCATATTCCAAGTTGAAAAATTCTAAGCCAAAAGTATGTCAATGTATGTTTCTATGTTTTGACAAACAATAAACTCCATAGTAATGATATAATCAAGCTGCATAATCACAGTAAACAATATTTGATTTATTGATGACTTGAAACATGTTATTCTTGTCGTGTATTTGGATTTGTATTCTAACTACCTGTTTTACTTGAGCAGCAGGAACCTCTTAAGAAGCAAGATATGTGGAAATTCAATGAACCTTCAAAGCAAACTGATTATTCATCTGAGAGGACAGCAACAAAATCTGAATACCCTCCGATTCAGAGCTTTTCCGCAGAAATGGCATCGCACAAATCAGAATTACAAAGCAATTCAGTTCCTGGGTCTGGTCGTTTTAATTACGCCAATGCATCTCAGTCTGTTAGAGAACAAAAGAGATCGGAAGACGGATTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTACAAATGCACACATCCAAATTGCTCTGTGAAGAAGAAAGTTGAGAAGTCTTTGGATGGCCAAATTACTGAAATAGTGTACAAGGGCCATCATAACCACCCAAAACCACAGTCTACTAGAAGAACAAGCTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCTGGGATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAAATGGATCATTTCTCCATGAAGGAAGATTCTTCAGCTTCTGTAGGAGAGGAGGAGTTTGAACAAACATCCCAAACCAGTTATTCTGGGGGAGATGAAGATAACCTTGGACCAGAGGCAAAAAGATGGTAAGATCGATAAACGACAATCTAATGGCCTGATTCACTACTTTAGAATGAAAATGCAGAGTTTACTTGGTCTGAAATATAATATAACTAATTCTGATTCACTTTGTTTCAGGAAAGGAGATAATGAAAATGATGACTATTCCGCCTCAGGGAGTAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTGAAAGGAAATCCAAATGCAAGGTAATTAACTGAAGAGAACAAAGACCTTTAGTCAATGCTTCTATGCGTTACAGTTCATTGTCATCAATACCATAACTTGTTCACATTCCATGTGCAGGAGCTATTACAAATGCACTGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCGCATGATATCAAAGCTGTGATCACAACCTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGTGGTAGCGCAAGTTATAACATGAACAGAAATCCTGTGAACAGCAGCATATCGGCTCCTATAAGACCCTCTGCAGTGAACTGTTATTCCAACTCATCAGGTTTCAAAAATTCTCTCTACAATAATACCAAACTTCCAGCAACCAGAAATCAGGAATCTTTTGCACTGGACAAGTTCCAGAACCCTGGAAATTTTGGCCAATCGGCTCTCAACAAATCAATGAGTTCATACACGGATCATGCACCGTACTCACATGCTACATACTCAAATGCCAAGGATGAGAGAAAGGATGACTCCTTCCTTCAGTCATTTCTGTCAAAGGACTTCTGAATTTTGCCCTACTTATTAATATTATCCTGGATATGTTATTGTATAGCATGTAGGATTTTAGTTACTCATCACAGCAGAATATGGACAAAGAATTCCCAATTGTTTTCTTGGTTACCTCATTTAGATTAGTGAGTGGAACTACAGCCATAGTGACAGCAAATTGTTGCTATACTACCTGTCTACCAAGTTCATCTCCCAATAGAAACTTTGATCTTTATCATATGATTTGACGAATGAATTCTATTATTCTTTTGTTGTATTTTAGGGGAAAAGGTTTTCTTGGAAGAATCTTCTTTAATTAATCTTGTAAGAATGCTTGTGCTGGCAATTTCCACTATGCAGTCTCTACTTCTTGTTTATATT