Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13449 LG3 28668393 28670593 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 28668396 missense_variant p.Glu2Lys
T/C 28668457 missense_variant p.Val22Ala
C/T 28668462 missense_variant p.His24Tyr
A/T 28668489 missense_variant p.Arg33Trp
T/G 28668510 missense_variant p.Leu40Val
T/C 28668518 synonymous_variant p.Val42Val
T/C 28668560 synonymous_variant p.His56His
G/C 28668597 missense_variant p.Glu69Gln
C/T 28668637 missense_variant p.Ala82Val
A/C 28668678 intron_variant
A/G 28668695 intron_variant
A/G 28668708 intron_variant
T/C 28668721 intron_variant
C/T 28668751 intron_variant
G/C 28668754 intron_variant
C/T 28668767 intron_variant
T/A 28668790 intron_variant
T/A 28668889 intron_variant
G/A 28668890 intron_variant
T/A 28668905 intron_variant
T/C 28668928 intron_variant
T/C 28668958 intron_variant
G/A 28668977 intron_variant
T/C 28669003 intron_variant
G/A 28669025 intron_variant
G/C 28669041 intron_variant
A/C 28669065 intron_variant
T/G 28669097 intron_variant
G/T 28669133 missense_variant p.Trp86Cys
C/G 28669137 missense_variant p.Leu88Val
A/C 28669139 synonymous_variant p.Leu88Leu
G/A 28669151 missense_variant p.Met92Ile
G/C,T 28669156 missense_variant p.Trp94Ser
G/A 28669177 stop_retained_variant p.Ter101Ter
A/T 28669208 missense_variant p.Gln111His
G/A 28669226 synonymous_variant p.Leu117Leu
G/A 28669230 missense_variant p.Val119Met
A/T 28669261 intron_variant
A/G 28669285 intron_variant
A/G 28669296 intron_variant
G/T 28669378 missense_variant p.Ala138Ser
T/C 28669415 intron_variant
G/C 28669506 missense_variant p.Ser148Thr
G/C 28669550 missense_variant p.Glu163Gln
C/T 28669557 missense_variant&splice_region_variant p.Thr165Ile
C/G 28669577 intron_variant
C/T 28669587 intron_variant
A/G 28669605 intron_variant
T/G 28669611 intron_variant
A/T 28669618 intron_variant
C/T 28669671 intron_variant
G/A 28669701 intron_variant
A/G 28669708 intron_variant
T/G 28669754 intron_variant
C/T 28669762 intron_variant
G/A 28669784 intron_variant
A/T 28669785 intron_variant
T/G 28669794 intron_variant
T/A 28669802 intron_variant
A/T 28669810 intron_variant
A/G 28669846 intron_variant
A/G 28669895 intron_variant
G/A 28669933 intron_variant
C/T 28669962 intron_variant
G/C 28669991 intron_variant
T/A 28670001 intron_variant
A/C 28670023 intron_variant
G/A 28670049 intron_variant
G/A 28670148 intron_variant
T/C 28670167 intron_variant
T/G 28670199 intron_variant
G/T 28670214 intron_variant
T/G 28670223 intron_variant
G/A 28670348 intron_variant
C/T 28670362 splice_region_variant&synonymous_variant p.Leu167Leu
T/C 28670377 missense_variant p.Trp172Arg
G/A 28670379 stop_gained p.Trp172*
T/A 28670392 missense_variant p.Leu177Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13449.1
MENIALVTDESMESICKVAELVAHCTTLETHKRPYMWHALNVLVPLVEQWNPACTHEQHEEEGCDVIYEEHYDMSISEIVSAVDIMGTKRMNELEAEITVLSKVRHMHLVAILENCIDGDEKLLGNNSFGRSTRSGIFASPTSAKTESSMGGRVAGTFGYLEPEYTGHCIEGDGKLLVYEYMPQWTLTTHLLSWHENDNAPLTWKQRVIIALDVARGVEYLHRLAQQSFTHKDLNPQTYFWEMT*


CDS Sequence:
>Vu_13449.1
ATGGAAAACATTGCACTTGTAACTGATGAAAGTATGGAGAGCATATGCAAAGTGGCTGAGCTGGTAGCTCATTGCACTACTCTTGAAACCCATAAAAGGCCTTATATGTGGCATGCATTGAATGTTTTGGTTCCTCTGGTGGAGCAATGGAACCCTGCCTGCACCCATGAACAACATGAAGAAGAAGGTTGTGACGTGATCTATGAAGAACATTATGATATGTCCATCTCGGAAATTGTCTCCGCTGTTGATATAATGGGAACTAAGAGAATGAATGAATTGGAAGCAGAAATTACAGTTCTGAGTAAAGTGAGACACATGCACTTGGTGGCAATTTTAGAAAATTGTATTGATGGTGATGAAAAGCTTTTGGGTAACAATAGCTTTGGACGTAGCACGAGGAGTGGAATATTTGCATCGCCTACCTCAGCAAAGACGGAAAGTAGTATGGGTGGACGAGTGGCGGGAACATTTGGATATCTAGAACCTGAATATACAGGACACTGTATTGAAGGCGATGGAAAGCTTTTGGTTTACGAGTATATGCCTCAATGGACATTAACTACACATTTGTTATCTTGGCATGAAAATGACAATGCTCCTTTGACTTGGAAACAAAGGGTAATAATAGCTTTGGACGTAGCACGAGGAGTGGAATATTTGCACCGCCTTGCTCAGCAAAGCTTCACTCACAAAGACTTAAACCCTCAAACATACTTTTGGGAGATGACATGA


Promoter Sequence:
>Vu_13449::LG3:28666393-28668393(+)
AGACTGATCTGTAATATTATTCAATGTGAGTATTCTATTATATAGTTTTAGACTGTATTTTTGGGATGTTACACATGATAACTTTACATAATACATACGAAATATGAAATCCAGCATCAGCAAAATTTTGAAACATTTTTAATTTGAGGAAATGAAACTTCAAAGCATCTCTATCGAAAGTTGTCAGATATCAACCTCATTAAATATTGTACATTGTACCTTTCTGTTGATGGATTGGCAAGTGTACCAAATTGCACAAGTAATATAAAATGGTAAGACCAAGTATCGTATCCCTGAAGACTCTCGGCACTAGACAGTTGTGTGATAACTTAATTAATTAAGACTTAAATAAAACGAGATTGTTGGTTTCAAATCCAAAGACATAAAATTAAATATGAATGCAAATTGATCAATAGTAGAGTAACACAAAGATGAGCGGATGTTGTTTAATATGAGATGAATATGTTTTTAGGGTTTGATTTCACCAAGTTTACTCTCATGTATATAAGAATTCTTCTTTTTACATTAATGTTAACGTCACTCACTAAATTACTTAGAACCCGATCCCTCGGCGCAATAAGTCTACCTTAATTCTTAGTTTGTGCAATTCCTAGCGTTCCTTGAAAATTAAGTCTGAAGATGAAGAGCTTAAGACGACCAAGTACTCATACCCTCATCCCTGAGAAATATCACCCTTGGGAGAATTCAACAAGAACCTGAATTGTAAGGAACCTCCCGACACTCATGCAATTCATAAATCATGCTACTAAATGAGTTAAATAGAGCAAGCATTGAAACAGATGAATTCCCTAACAATTAATGAAAAAACATATAAATTAAGAATCAATTCAAATACATGAGAGTTCACAAGGTTACATCATCCCCCAACAACAAATAGAGTTTAGTTTCCCATAAACATGGAGAAACTAGATGAATAATGGAAAAGTATGAGATAGTGAAACCCTAAGAGTAGAAGAGGAAGCTCCTGCCTCCAGATCCGCCTTTAGAGAGTAGAAGAGTGTGCTGTTGTGTTGTTCCAGCCAGAGATACAAAACCTAGAGCGTCTGGGTCCTTTAAATAAAGTCAGAAAAGAGTAGAAACAGGGCCCGGTCCAAAAGAGTCGAAACAGAGCAAAAATTGCGCCGGATCTGCGACGCACGACGCTCGGACTCCCCATTTAGGGCGCCCGGGCGGTGGATGATCCTCATGTAGGGCTTGAGCCTTCAATTGGTCGCCCAGACTTCGGGTTCCGACGCCCGAGCGGTGGACATCGATTTTTCGAGGCTCAAGCCTCCAGATAGGGCACCCAAGCTTTGTGCGGTTCCTCCTTTTGGTGCTTTTCCAAGTCTTTCTGAGCTCTAACTCCTTAGCACTTCATCTTTGTTTTCCGCATTCTCTCATTACCTATTAAAACAAGGGAAATTAGTCATAAAATCACAAAATTCAACCTCAACTCTCTTATTCACACAACTTAATGAAAAAGCAGGAGTCCAAGGAAGTTTCTAAGTGAAAAAGGGTGTATTCAGTATTAAAATTACATCACAAATAACGGTATTTTCAACTGTTAACACTTTGTAGCAACATCAGTTCCTAAGAGGTCATCCCTTGGATCAAGCTCAGTATAGCCTACATCTTTTGCTTCATTAGTCATTATGCGCGCAGTAGAGCTCTCTCTAAGAGAGCTCTGATATCATAACAAATTAACAATTGAAACTGGAAAAGATAAAAAATTAATCTTATTTTATTGAATTATCGTGCATAATTGTACAGAGGGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATACATAAAATGAAATAAAAAACCTTAAAATAAGGAAGAAAATAAATAACAAATAAAGATAATCAAGTACTATAACAAATATAAATTAGTTAGAAACTAATTTGATTATGACTTGTATTACCAAAAGAAAGGCCTCACTTGGTTTCATGATTCTGTAGGATTGTAGATAACA


Gene Sequence:
>Vu_13449(+)
ATGGAAAACATTGCACTTGTAACTGATGAAAGTATGGAGAGCATATGCAAAGTGGCTGAGCTGGTAGCTCATTGCACTACTCTTGAAACCCATAAAAGGCCTTATATGTGGCATGCATTGAATGTTTTGGTTCCTCTGGTGGAGCAATGGAACCCTGCCTGCACCCATGAACAACATGAAGAAGAAGGTTGTGACGTGATCTATGAAGAACATTATGATATGTCCATCTCGGAAATTGTCTCCGCTGTTGATATGTCTTCAATTTTATACATGTGGATATGAGGAAAAAAGGTTCCACAAATACGGTGTTGACCAATTTTAAATTTGATAAATAATGGAGTCTATTCATGTGTTCTTTCGAGTTACAAGAAGTTCTCCTATTCTTATTATGTTTTTCTTGCATGTTATAGTACGTATGTTAAACGGCAGAAGTGTGTTCCAATCGTAGATTTTACTGCTGTGTTTTTTGTCGCGGTGGTTGTGCTTGTCTTTTGCATGTGCCATACCAAAACTAGCATTGGACATTGAGAAAGGTTAAGAATCTAAAAACGAAAAGAAAGTTGTTTCGAGAATTGAGGGTCAACGTGTTACCATGTCAATTGAATTTCTTTGGTAAGTAACGAAAAATTTCAGGGAAGAAAACATTTTGAGTAGGGGGATTTGGAGTGGTTTACAAAGGAGAATTGGATGTTGGAAGTAAAATTTTTGTGAAGAGAATGGAATGTGATTCTTGTAGAATGGGAACTAAGAGAATGAATGAATTGGAAGCAGAAATTACAGTTCTGAGTAAAGTGAGACACATGCACTTGGTGGCAATTTTAGAAAATTGTATTGATGGTGATGAAAAGCTTTTGGTATACGAGTATATAAATCAAGGGACTTTAACTCAACAATTGTTCTCTTAGAACGAAAATGGCAGTGCTCCTTTGACTTGGAAATAAAGGGTAACAATAGCTTTGGACGTAGCACGAGGAGTGGAATATTTGCATCGCCTACCTCAGCAAAGGTTCATTCATAGAGACTTAAAACCTTCACACATACTTTTGGAGATGACATGATACCCAAGGTTGCAGATTTTGGTTTGGTTAAAATTATTGCACCAGACGGAAAGTAGTATGGGTGGACGAGTGGCGGGAACATTTGGATATCTAGAACCTGAATATACAGGTATATAGAAAGTTTTTCAATACATGCCTGTCTTTATTTGATTTTATTAATTAATGTGATGTTGTTGTTGGCAGCTACTAGAGAGTGACGAGGAAACTAGACGTGTACGCACTCGGATTAGTTTTGATGGAACTAATTAGCGGTAGAAAGATAGAAGATTAATCTTATTTTATTGAATCATCGTGCATAAATGTTCATAGAACTATCTATATACATAAAAGGAAGAAAAATATTTTAAAATATGGAAAAAAAAATAAATAACAAATAAAGATAATCAAGTAATATAATAAATATAAATTAGTTAAAAAGTAATTTAACTAATATGACGAGGAACAAAGGAAGTACAACTTACATACATGGTAGCTTTATAGTTGTATAAACCTGTGCGAAACTGTACGAAAACAGAACGTAACAAACTAACAAAAACTAAAGTAAATTGACTTCTAATAGTGGTTGTGCTTGTATTTTGCATGTGTCATATAGAAAACTGGCATTGGACATTGGGAAAGGTTAAGAATTTAGAAAACTAAAAGAAAGTTGTTCCAAGAATTGAGGGTGAACGTGTTACCACTTTAATTGAATTTCTTCGGCAAGTAACGAAAAACTTTAGTGAAGAAAACATTTTGGGTAGGGGGATTTTGAGTGGTTTACAGAGGGGAATTTTATGATGGAACTTAAATTTTTGTAAAGAGAATGAAATGTGGTCTTGTAGAATGGGAAGTAAGGGGATGAATGAATTGGAAGCAGAAATTACAATTCTGAGTAAAGTGAGACACATGCACTTGGTGGCTTTTTTAGGACACTGTATTGAAGGCGATGGAAAGCTTTTGGTTTACGAGTATATGCCTCAATGGACATTAACTACACATTTGTTATCTTGGCATGAAAATGACAATGCTCCTTTGACTTGGAAACAAAGGGTAATAATAGCTTTGGACGTAGCACGAGGAGTGGAATATTTGCACCGCCTTGCTCAGCAAAGCTTCACTCACAAAGACTTAAACCCTCAAACATACTTTTGGGAGATGACATGA