Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13434 LG3 28412512 28413993 PREDICTED: two-component response regulator ORR22-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 28412525 missense_variant p.Ile342Val
G/T 28412608 missense_variant p.Pro314His
G/T,C 28412611 missense_variant p.Pro313Arg
G/A 28412680 missense_variant p.Thr290Met
G/T 28412780 missense_variant p.Leu257Ile
C/A 28412787 missense_variant p.Met254Ile
G/A 28412802 synonymous_variant p.Asn249Asn
G/A 28412816 stop_gained p.Gln245*
G/A 28412817 synonymous_variant p.Ser244Ser
T/A 28412995 missense_variant p.Asn185Ile
C/T 28413004 missense_variant p.Arg182Gln
G/C 28413188 missense_variant p.Asn153Lys
A/G 28413557 missense_variant p.Tyr104His
A/G 28413859 synonymous_variant p.Thr45Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13434.1
MEEERHVSECSKTSPSNEEGCEESEEENEDESKQNNNGGSSSNSTVEENEKKATVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVEANQVLGDPRLLVETGDRNVYNLSQIPILQGYNPTQTSAYRYGYGDASLAIYENMVKTCMNRSSVDESGAEFCGSRLTERIHGTNSNMNWSHNVLQVDCSSGFNESFCRPIKMNQEDPHQSTELMQPSAQELMPNNDIASKNLVELKSLKRKASDSDIDLNLSLKLSSRVSDEKHGSMVEHEIDSNLSLSLCSQSSSSYNLSSRLRKSSQDHSKEQGERGRTLDLTI*


CDS Sequence:
>Vu_13434.1
ATGGAAGAAGAGAGACACGTCTCAGAATGTTCCAAGACAAGTCCTTCCAATGAAGAAGGTTGTGAAGAGAGTGAAGAGGAGAATGAAGATGAGAGTAAGCAGAACAACAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGGCAACAGTGAGACCTTATGTTAGATCCAAGTTGCCTCGTCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTGGAGGCAAATCAAGTATTGGGTGATCCTAGGCTCCTAGTAGAAACTGGAGACAGAAACGTTTACAATCTCAGCCAAATTCCCATTCTTCAAGGCTACAATCCAACCCAAACTTCAGCATACAGATATGGATATGGGGATGCTTCTCTTGCTATCTATGAAAACATGGTGAAAACTTGCATGAATAGGAGTTCGGTTGATGAATCTGGAGCTGAATTTTGTGGCAGCAGATTGACTGAGAGAATTCATGGAACCAATAGTAACATGAATTGGAGTCATAATGTACTCCAAGTTGATTGTTCTTCCGGTTTCAATGAATCCTTCTGCAGACCAATCAAAATGAACCAAGAAGATCCTCATCAATCTACAGAATTAATGCAGCCAAGTGCACAAGAACTCATGCCAAACAATGATATTGCTTCAAAAAATCTGGTGGAACTAAAGAGCTTGAAAAGGAAGGCTTCAGATTCTGACATTGATTTGAATCTGTCACTTAAATTAAGTTCAAGGGTCAGTGACGAGAAGCATGGAAGCATGGTGGAGCATGAAATTGATAGCAATCTATCACTGTCTTTGTGTTCTCAATCCTCCTCCTCTTATAATCTCAGCAGCAGGTTGAGAAAATCATCACAAGATCATTCTAAGGAGCAAGGGGAAAGAGGCAGAACATTGGATCTCACTATATGA


Promoter Sequence:
>Vu_13434::LG3:28413993-28415993(-)
AAAAGAAATAAGAAAAGGAAATTAAAAAATTGAAAGAGAAGAAAAATTAGGAAATAATGTTGTAGGGAGAAGGAGGCCCCGTGATTCCCGAGGAAAGGGCATGTATGTGATATATAAACAATCTTTTTGTGAGGTTTGGGTCTGCATCAGAGACAGCACAGCATCACATTACATTTCACACGAATCAATCAAATATTGTAAACCCTCCTTCTCTTTCTCACTGCTGTTTATTCATACATTTCTTAATTACTCTCATTCATATTCACAATATTACTTTTCTATGTCTGCTGCTGCCCACTTCAATATGTTTTTGCTTTCATTCCAAATTCTCATGAATAATCACTCTTATAGCTACTTAATTATCATCTTTCTAAATACCCAAACTCACCCTCTTTATCAATACTTTAGTTCTTCAGACATATTAAACTATAGATACTGAAATCATTCGTATATGCAACATTTTCAGTTTAACAAATGACTTTAAGATTCTAGTTCTAAACATTTTGGTTGCATTTATAATATTTTAATAATTTCTACCTGATAAAACTAGGATAACTTCATATATGTGATGTTAAAAAAAATAGTGTATGTTTGTTTGAGCTTATTTAGTGATTTATTCGGTTGGAAAAAGTTTGGTGCACATAAAAAATTAAGGCAAGAATGACATTATCCAGTTCTACCAACCATGTTCTAATTTATTATTAAGGCAAAAATTAAGGCATAAGCATATTTTAGTATTATTTTTATATTCTCACAATTAGTTCACAGCCCATTTCTTCATTCAAATCTAACTCACCATAATTAATTATGCTACACTTTTTTTAAGCACCTTGATATCTTCCTACTACATATGGTATTAATTAAAAAAATATGAATCAGGTTTTTTTTTTTAAGAAATCCTCGTTTGAATCCATTATTGATTACTAATAATAAGCATTAATATTACTCTAGTTATTAACTTGTGATCCAATCCATCTAACATTCGTAAAAACCTACAAACACTATTATTATATAATACATTTAGGTAGGGAGAATTTACATGGATCCAAAATAAATTGACAACGTCCTACTTCAACAAAATAATCTGAGATACCTATATATAACTAAAGATATAACATGAATAATATAACTTAGATCTTGGCTTTTGAGAGCCACACTTCAATCAGATTGTCATCAGAGTCAACTTTGGGTACCTTGTCACAACACAAACAGGCATAACACAACATTAATAATGTTTTAAAAATTTATATATGAATTATTTTAAAATGTACTAATATACATATATATGTGCTGAGACCTATTTGTTCTTTATTTATTTAGTATAAGTTATATAGTATTTTGTGATGAGAAGACTGAGACTCGTGTTTCAAATTTCTCGGAGAACATATTTTACTTTTGCCTACAGTATGCTATGTACGGCTCTACAAACTTTAAACTAAGCAATTGCTGTGACTGGCTATAATTTATTCACACGAACTACTTTATTATTATCACGTAAAAAGAAAAAGAAAAATTGTTATCCAAGTTGGAACGATAAAATTGATGTCAAATGAAATAATCTTGTATATTCCTTCCATTCCTTGATGTCCATGCATTTATTAAATACTCCAACATGCTTACGATATGAGAACCAAATTATTCGTTTACTCATCTCAAAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCTTTCTAAATTCTTTGTGAAAATCAATATACGATCTAGACTGTTTCAGTATCTGGGCATGCCATGTTTGTCATCGATTTATGTAGCCATTTGGTGTTGCTATGATAAAGAATTTCGTATTTTTCATTGGCCAAGATTAATAGAGGAGAAAGAACAATTGGAGGAGTTGCAAAAAGTGTATAATTCCGACCAATAATTAGCATATTGCGACATAGAGGAAAGTGTTTGTTCTGTCTTGCTTGAAATTGTGATCTTAAAATCCAGTTTCCAAGGAAGTGTATTCGGAAGGTGATGAGG


Gene Sequence:
>Vu_13434(-)
ATGGAAGAAGAGAGACACGTCTCAGAATGTTCCAAGACAAGTCCTTCCAATGAAGAAGGTTGTGAAGAGAGTGAAGAGGAGAATGAAGATGAGAGTAAGCAGAACAACAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGGCAACAGTGAGACCTTATGTTAGATCCAAGTTGCCTCGTCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGTGAGTTCCATATGACTTACTTTTTCTAGATTTCAATTTATCATTAGCCCTTGCCAGGTTAATTAATTCACAATTAATTTCAATTGTGTTATATTTGATCATTTTTTTGCTTTTCTTGCGTGTAGGAGCAACCCCAAAGTTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGGTAAAATCATGTGCTGGCTAAGGTTTTCTTTAAATAGCAGTTTTTGTTTGTAATTCTTTTGCCAATTTGGTTAAATTCTTTTCTTTTGCCCATGTTTTTCCTTTTCCAGATGTACAGGAGCAAGAAGGTGGAGGCAAATCAAGGTAGAATAAGGTTTCCCTTTTTGGTATAATGCTAAACCTTGAGTAAGTAATTAATTAGGGTTTGTAATGCTTAGAATCCCTAATGAATATTTGGATTATGTATGACAGTATTGGGTGATCCTAGGCTCCTAGTAGAAACTGGAGACAGAAACGTTTACAATCTCAGCCAAATTCCCATTCTTCAAGGCTACAATCCAACCCAAACTTCAGCATACAGGCACATACATAATACCACCAACTCTCACTTCAAATTCTCTCAAACATGCATTTAGAATTTCACAACTGAATACCATTCTTTCTTCTTTCTATACAGATATGGATATGGGGATGCTTCTCTTGCTATCTATGAAAACATGGTGAAAACTTGCATGAATAGGAGTTCGGTTGATGAATCTGGAGCTGAATTTTGTGGCAGCAGATTGACTGAGAGAATTCATGGAACCAATAGTAACATGAATTGGAGTCATAATGTACTCCAAGTTGATTGTTCTTCCGGTTTCAATGAATCCTTCTGCAGACCAATCAAAATGAACCAAGAAGATCCTCATCAATCTACAGAATTAATGCAGCCAAGTGCACAAGAACTCATGCCAAACAATGATATTGCTTCAAAAAATCTGGTGGAACTAAAGAGCTTGAAAAGGAAGGCTTCAGATTCTGACATTGATTTGAATCTGTCACTTAAATTAAGTTCAAGGGTCAGTGACGAGAAGCATGGAAGCATGGTGGAGCATGAAATTGATAGCAATCTATCACTGTCTTTGTGTTCTCAATCCTCCTCCTCTTATAATCTCAGCAGCAGGTTGAGAAAATCATCACAAGATCATTCTAAGGAGCAAGGGGAAAGAGGCAGAACATTGGATCTCACTATATGA