Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13312 LG3 26042080 26044259 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 26042089 5_prime_UTR_premature_start_codon_gain_variant
T/C 26042096 5_prime_UTR_variant
C/G 26042126 5_prime_UTR_premature_start_codon_gain_variant
T/A 26042127 5_prime_UTR_variant
G/T 26042229 5_prime_UTR_variant
G/T 26042245 5_prime_UTR_variant
T/C 26042249 5_prime_UTR_variant
T/C 26042289 5_prime_UTR_variant
T/A 26042339 5_prime_UTR_variant
G/C 26042340 5_prime_UTR_variant
A/G 26042404 missense_variant p.Thr4Ala
A/T 26042415 synonymous_variant p.Val7Val
A/G 26042799 synonymous_variant p.Pro135Pro
T/C 26042945 intron_variant
G/T 26042959 intron_variant
T/G 26042989 intron_variant
T/A 26043032 intron_variant
T/A 26043038 intron_variant
C/T 26043161 intron_variant
T/A 26043314 intron_variant
T/A 26043977 3_prime_UTR_variant
A/G 26043985 3_prime_UTR_variant
A/T 26044219 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13312.1
MNRTIEVLSPASYLQNSNWLFQESQGGGWTAEENKLFENALAYYDKDTPDRWMMVAAMIPGKTVGDVIQQYRELEEDVSVIEAGLIPVPGYTTSSFTLEWVNSQSYDEFKHFCTVGGKRGASTRPSEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKSPSSDTTRPSSPLQNQKLSSMVKQEYDWKSPCDDMPFVFNSTNGNMFMAAPLHGISSYESRPQEHILRQSPWMPVFTL*


CDS Sequence:
>Vu_13312.1
ATGAATAGGACAATTGAAGTACTGTCTCCAGCCTCCTATCTCCAAAATTCCAACTGGTTGTTCCAGGAAAGCCAGGGAGGAGGATGGACTGCGGAAGAGAACAAGCTGTTTGAGAATGCTTTGGCTTACTATGATAAGGACACCCCTGATAGATGGATGATGGTGGCAGCCATGATTCCTGGGAAAACTGTTGGTGATGTGATCCAACAGTACAGAGAGCTTGAGGAAGATGTGAGTGTCATTGAAGCAGGTTTGATTCCAGTTCCTGGCTATACTACCAGTTCTTTCACATTGGAGTGGGTTAACAGTCAAAGCTATGACGAGTTCAAGCACTTTTGTACTGTTGGTGGGAAAAGGGGTGCATCCACTAGGCCATCTGAGCAGGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAAGAGCACAGGCAATTTCTGCTTGGTCTGAAGAAGTATGGTAAAGGGGATTGGAGAAACATTTCAAGGAACTTTGTGACCACAAGGACACCTACCCAGGTTGCAAGTCATGCTCAGAAGTACTTCATCAGGCAGCTTACAGGGGGGAAGGACAAGAGGAGATCCAGTATCCATGACATCACAATGGTCAATCTCCAAGAAACAAAATCTCCTTCATCAGACACTACCAGGCCTTCTTCACCCCTACAGAATCAGAAATTGTCTAGCATGGTTAAGCAGGAATATGATTGGAAATCGCCATGTGATGACATGCCTTTTGTTTTCAATTCAACAAATGGAAACATGTTCATGGCAGCACCACTGCATGGGATTTCTTCATATGAATCTAGACCACAGGAGCATATACTTAGACAATCTCCATGGATGCCAGTTTTCACCTTGTGA


Promoter Sequence:
>Vu_13312::LG3:26040080-26042080(+)
GTAGTCGAAAGAGCATAAAGATTATATAAGAAAGGGGTTTGTGATTGTCATACTTTTGTTCATAAGAACATTGGGAAGTGGGAGCAAAGAGAAGTGTGGTAGTGGTGTACAACGAGATTGCCATGTTGTGGTTAGGATCATCCATGGAAATTATGTAACACGATTAGGTCGACACTGGAACCTTTTTTTACTATTTTCTTTTGTACTTTCATGTTCTTCTAAAATATTCCTAATTATGTCTCTCTTTTCCCTCTCACATATTTTGTTCCTAGTATTTATTTTATATTACTTTAATTTCATTTAAACATTAAGGAATTTTACTTACTGCTCTATTTTTGTGTTCAGAAAAGGGAAAGGAAAATGCAATTCAATTTTTTTTTCCTTAGAGTCTCTTTTATTTTCTATGATTCATTTTATCTAATATGTCAAAGGTCGAACATCCTCGGATTCAATCAAACACACTTCATTCTGTACAAAATAATTTACACTTTATAGTGAGAAAAAAAAAGTGACAAAAAAAATCTCATTTTACCTTATATACATAAGGGTGACAAAAATAAGACAAGATGAACTGGTCTGCCATGACTAAACCAAATCGTAGCCTTATGAGCCAACTCATCCATATTTTTTAATTTTTTGTGTTTTTTTTTTTGTTATTTTAAAGTTGTGTGTGTTATATACATATTAAAATTATTCATAGTGGAAAAGTCTTTGAAAATTAAATTTCAAATCTTGATTAAAGTATTTTATATTATTTTTATATATTAGAATAGTTAAACACTATTCAAAATCATTAAAAAATTGCTAGAAACACTAGTTAAATTAATTAAATTAAAATCAAATCATAAATTATATTCATTACAACCTAACAATAATAGATTAAATTATTAATTTACATTGAAAGGACAAAATGATACAAGAAACTCCACTATTATAAAAAAGATTCTTAAATGAAATAGAACTATAAGAAAAACGGACTAAGAAAACAAATTTAATGCTCTTAAAATCACAACCACTTAATCAATATTTTGAAAAAACCATCAGTTTCAATCCTTAAATTTCACCTTACTTTCTCTCCTTAAAAGTCTCCAAAGTTAAAAAAAAACAAAAAAAGCGTTTTACTTTTTTTTTTACTGCTTTCGTTCAAACGTGATTTTAGTCTTAAAACTTTTGAATAAATCTAATTAATAGGATTTTTGACATTTTAAAATCCTAAATTTTTTTATTAAAATGTGTTCTTAACTCAATTATTATATTGGAAATTTTTAACTATTACAAATGGCATACTTGTATAATTTTACATTGAAATCTTCAAATTTAGAAATTAATTATTTTAAGCCGTATGCATATATTCTTTAGTTTGTTTAAATTCATAGAAAAATAATTTTAACTTAATGGTTATAATTTTACACGGTAAAAAGAAAATGAGATTAAAAAATGTATACCAAAATGCTAAATCAAATAGTTTTTATTTAGAGACGGGGAAAAAAATCCTACGAACAGAAAAAAATAGTTGCATAAATAGCATAAAGAAAAAATGAACAGTGGGTAATGGAGTCTTTAGCCAGCCTCAACGTTGCTCTCATTTCTCCATTGTCAATGGTTTGATGAGTTGACAAGGACAGCTTCATGGTCTCACTCAAAACCCAAACCAAAGATTGTTAGTGAGTCACTGTCAGCTTATTAGTCTCATTCTCAGCCCCCACAAACATCCTCTGCACCAATCACAACTCAACCCTTTTGACTATCTCTCTCCTCTTCTCTGTTCCATAGATCGCTGTCTTTCAATCACTTCACACATTTCTCTTCACTCCTACCACTCTCTGCACTGCACACACCTCACACCCACTTATATTTCTCTTCAAATCTCTACCTTTTTGCTTTTCCCAGTTGCCCCCTCTTTACTGTTTTTGCTTCTACCAAAGATTCTACCACCAATACTCCAATACTCCAATACTACTTAGATACGTGTATCTTATATGCACTTCACAGCCCTACCA


Gene Sequence:
>Vu_13312(+)
AATTATTGAGTGTCACTCTATAATTTTCATATGGGTTTAGCCTTTTCTTTTCTCCGTTGGTTGCTATGCTGATTGTTTCCTCTTCTCTTAGATCTGAAGAGTTTCTTCTGGGTTTATGCTTTGCCCCTCATTGATTCTCTTCAGTTTTCGAACAAAGTCTCTTTGGATTTGGATTCCTTTCTCCAATATAAGCTCCTATCCTGTGCATTTCTATCTCGGGTATCTCTCTCTCTTTGAACTTTTCTGAGAGAGAGAGAATTGATTTCAAAATTTGTTGTTTTAAACTGCTTGCTATGTTCAATTGTTAGTGAGATCATGAATAGGACAATTGAAGTACTGTCTCCAGCCTCCTATCTCCAAAATTCCAACTGGTTGTTCCAGGAAAGCCAGGGAGGAGGATGGACTGCGGAAGAGAACAAGCTGTTTGAGAATGCTTTGGCTTACTATGATAAGGACACCCCTGATAGATGGATGATGGTGGCAGCCATGATTCCTGGGAAAACTGTTGGTGATGTGATCCAACAGTACAGAGAGCTTGAGGAAGATGTGAGTGTCATTGAAGCAGGTTTGATTCCAGTTCCTGGCTATACTACCAGTTCTTTCACATTGGAGTGGGTTAACAGTCAAAGCTATGACGAGTTCAAGCACTTTTGTACTGTTGGTGGGAAAAGGGGTGCATCCACTAGGCCATCTGAGCAGGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAAGAGCACAGGTAAATGACTCCATCTCATCACCTTCTTTTGGTGTGTGTCGTGCCTTTAGCAGTGATCCCAATTTAGATCATGTTCAAAATTATGGTTGATTAATCGTTGCTTAGCTAGGATGCTAAAATGCTTTTTAGTTAAGTTGTTGAAGTAATTTTTTAAAAGGGATATGCCACTTCGATTTTATTTTCAATTTCAAGGTTTTTGGGGTCTTTGGGACTACAATTATGGTCACATCAGATGCATTCATCTGTTCTTCCCTATCGACTACATTTATCTGTACTTTCCTGTCAACTGGTTATCTTAAATACCATCAAGAATTGTAACAAAACAGTAACTACAACTGTACCTGCTGTATAAAAGACTTGCTTATAGGTTAGCTTAGGATGTTTGATTTATGTGTTTGTATGTTTGAGTGTTTATAAGTATCTGCCTGATTTTTATGTTATTTTTCCCTTGGAAAATGTTTCTCTTGTTGGTTTCTTGCATTTGCATATCTGCCTCATGTTCAGGGTTTGTGCTATTTGCCTGTTCTGAAGTCTTTGGTTATTGAAAACAACACAGGCAATTTCTGCTTGGTCTGAAGAAGTATGGTAAAGGGGATTGGAGAAACATTTCAAGGAACTTTGTGACCACAAGGACACCTACCCAGGTTGCAAGTCATGCTCAGAAGTACTTCATCAGGCAGCTTACAGGGGGGAAGGACAAGAGGAGATCCAGTATCCATGACATCACAATGGTCAATCTCCAAGAAACAAAATCTCCTTCATCAGACACTACCAGGCCTTCTTCACCCCTACAGAATCAGAAATTGTCTAGCATGGTTAAGCAGGAATATGATTGGAAATCGCCATGTGATGACATGCCTTTTGTTTTCAATTCAACAAATGGAAACATGTTCATGGCAGCACCACTGCATGGGATTTCTTCATATGAATCTAGACCACAGGAGCATATACTTAGACAATCTCCATGGATGCCAGTTTTCACCTTGTGATACCAGTGTGCAAATGCAATTGATGCAACGTCAATGATCTGTGCATCTCATTCAGGGTATAGAGTTTTGAAGGTACTAAAAGTTTGAATTTGAACCCTTTTCAGCGATGTTGGATTGCTTCATAGATAGTTTGTGTGAATATGTTGAGGAGGGACTGGAGTTAGTCCTTAGTAACTAGAATGTATGTAGAGATTAGTTGGAATCTTGTTCTGATATTAAGATTCTGAAACTAGTCTGTCTGAGGAGTTGAGTTTGGTGATGTGTAATATGATCTTCAGAATACATGTTTGGTAATTTGATTGTAGCTAGATGGAAAGCTTGAGTGAGCTTTCATTTGATGTTCATCTTCCCATAGAGGCAAGAGTTCTCTGCAGATTGCCCTGAGGAAGAGCAGTTATCTCTTACCTTTTAGAAAGATGCTTCAAATAAATATTGAGTTCCAAGTTTCCAT