Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13084 LG3 22777606 22781158 PREDICTED: leucine-rich repeat receptor-like protein kinase TDR
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   procambium histogenesis, protein phosphorylation, cell division, secondary shoot formation, phloem or xylem histogenesis, procambium histogenesis, secondary shoot formation, xylem development, protein phosphorylation, protein phosphorylation, phloem or xylem histogenesis, cell division, procambium histogenesis, procambium histogenesis, procambium histogenesis
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/A 22777648 synonymous_variant p.Pro847Pro
A/T 22777823 missense_variant p.Val789Glu
T/C 22777825 synonymous_variant p.Ser788Ser
C/T 22777829 missense_variant p.Ser787Asn
A/G 22777971 synonymous_variant p.Leu740Leu
G/C 22778117 upstream_gene_variant
A/T 22778175 upstream_gene_variant
G/A 22778194 upstream_gene_variant
G/C 22778291 upstream_gene_variant
A/G 22778347 upstream_gene_variant
G/A 22778415 upstream_gene_variant
A/T 22778460 upstream_gene_variant
C/T 22778555 upstream_gene_variant
C/T 22778560 upstream_gene_variant
T/A 22778722 upstream_gene_variant
A/G 22778777 upstream_gene_variant
G/A 22779016 upstream_gene_variant
G/T 22779073 synonymous_variant p.Arg696Arg
G/C 22779152 synonymous_variant p.Ala669Ala
C/A 22779182 synonymous_variant p.Ala659Ala
C/G 22779302 synonymous_variant p.Gly619Gly
T/A 22779322 missense_variant p.Asn613Tyr
A/T 22780008 missense_variant p.Ile384Asn
G/C 22780235 synonymous_variant p.Leu308Leu
G/T 22780385 synonymous_variant p.Ala258Ala
G/A 22780460 synonymous_variant p.Tyr233Tyr
T/C 22780639 missense_variant p.Ser174Gly
C/A 22780661 synonymous_variant p.Gly166Gly
T/C 22780694 synonymous_variant p.Arg155Arg
T/C 22780772 synonymous_variant p.Glu129Glu
G/T 22780856 synonymous_variant p.Arg101Arg
G/A 22781030 synonymous_variant p.Asp43Asp
G/A 22781133 missense_variant p.Thr9Ile
G/A 22781141 synonymous_variant p.Leu6Leu
G/A 22781143 missense_variant p.Leu6Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13084.1
MKPFLLFLTFFFLCQTHPLPVLSATTLPLQLISLLSVKSSLQDPLNNLHDWDPSSTFSNSSPQHPIWCSWRGITCHSKTSQITTLDLSHLNLSGSISPQIRHLSTLNHLNLSGNDFSGSFQFAIFELAELRTLDISHNYFNSTFPPGTSKLKFLRHFNAYSNSFTGPLPLELTSLRFLEHLNLGGSYFSDRIPPSYGTFPRLKFLDLAGNALGGSLPPQLGHLTELEHLEIGYNNFSGTLPSELSLLSNLKYLDISTANISGNVIPELGDLTNLETLLLFKNRLTGEIPPTIGRLKFLKSLDLSDNELTGPIPTQVTMLTELTTLNLMENNLTGEIPQGIGDLPKLEILFLFNNSLTGTLPQQLGSNGLLLKLDVSTNSLEGPIPENVCKGNRLVKLILFLNKFSHTLPPSLGSCTSLARVRIQNNFLNGSIPEGLTLLPNLTFLDISSNNFQGPIPEHLGNLQYFNISGNSFGTSLPASIWNATNLAIFSAASSNITGQIPDFIGCQQLYKLELQGNFINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAATADDQVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFGEEVGPWKLTAFQRLNFTADDVLECLSYFFLGMCSSAEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVEAAFGDGNSIVDWVRSKIKSKDGIDDILDKNAGAGCSSVREEMIQMLRIALLCTSKNPADRPSMRDVVLMLQEAKPKRKLQNSVVGGFGGDNVVAAPDIPFPHKPIAEQC*


CDS Sequence:
>Vu_13084.1
ATGAAACCTTTTCTTCTCTTTCTCACATTCTTCTTCCTCTGCCAAACACACCCACTCCCAGTTCTCTCTGCCACAACCCTGCCTCTCCAACTCATCTCCCTCCTCTCAGTTAAATCATCCCTCCAAGACCCTCTCAATAACCTCCACGACTGGGATCCCTCCTCCACCTTCTCCAACTCCAGTCCCCAACACCCAATATGGTGTTCATGGAGAGGCATCACATGCCACTCCAAAACATCACAGATCACTACCCTCGACCTCTCCCACCTCAATCTCTCCGGCTCAATCTCACCCCAAATCCGCCACCTCTCCACCTTAAACCACCTTAACCTCAGTGGAAATGACTTCAGCGGGAGTTTCCAATTCGCCATTTTTGAACTAGCAGAACTCAGAACTCTAGACATCAGCCACAACTACTTCAACTCAACCTTCCCACCCGGCACATCAAAGCTCAAGTTCCTCAGACACTTCAACGCCTACAGCAACAGCTTCACCGGGCCCCTCCCCCTAGAGTTAACCAGCCTTCGTTTTCTGGAACACCTGAACCTCGGCGGAAGCTACTTCAGTGACAGGATTCCACCAAGCTACGGCACTTTCCCAAGACTCAAGTTTCTAGACTTAGCCGGGAACGCATTGGGAGGTTCGCTTCCACCCCAATTAGGCCACTTGACTGAACTGGAACACTTGGAAATTGGATACAACAATTTCTCAGGAACACTACCTTCGGAACTGTCATTGCTCTCTAATCTCAAATACTTGGACATCTCAACCGCCAACATCTCAGGGAACGTGATTCCAGAGCTGGGAGACCTCACCAACCTGGAGACACTTTTGCTGTTCAAGAACAGGTTAACAGGAGAAATCCCACCAACCATAGGAAGATTGAAGTTTCTAAAAAGCCTTGACCTCTCAGATAACGAACTCACGGGGCCAATCCCCACCCAAGTCACCATGCTAACGGAACTAACCACGCTCAACCTGATGGAAAACAACCTGACCGGAGAAATACCACAGGGAATTGGAGACCTACCAAAGCTTGAGATTCTGTTCCTCTTCAACAACTCACTCACCGGAACCCTCCCTCAGCAACTTGGTTCCAACGGGTTACTACTGAAACTAGACGTTTCCACAAACTCACTCGAAGGTCCAATCCCTGAAAATGTCTGCAAAGGTAACAGGCTCGTGAAACTCATACTCTTTCTCAACAAGTTCAGTCATACCCTTCCACCATCTCTTGGGAGCTGCACCTCACTCGCTAGGGTTCGAATCCAAAACAATTTCCTCAACGGTTCAATCCCCGAAGGCCTCACGCTCCTCCCTAACCTTACATTCCTAGATATCAGCAGCAACAACTTTCAGGGTCCAATTCCGGAACACTTAGGTAACTTGCAGTACTTCAACATCTCCGGAAACTCTTTCGGAACCTCCTTACCTGCGTCTATTTGGAATGCAACTAATCTCGCGATCTTCTCCGCGGCTTCGTCGAACATCACCGGTCAAATTCCAGATTTCATTGGGTGTCAGCAACTGTATAAGCTCGAATTGCAGGGAAATTTCATCAACGGTACGATTCCATGGGACATTGGACACTGCCAGAAGCTGATTTTACTCAATCTGAGTCGAAACTCACTCACCGGAATCATTCCCTGGGAAATCTCCACTCTCCCTTCCATCACCGACGTTGATCTCTCTCACAATTCCCTCACCGGAACCATTCCGTCGAACTTCAACAACTGCTCCACTCTCGAGAATTTCAACGTCAGTTTCAACTCCCTCACCGGTCCAATCCCATCGTCCGGAATCTTCCCGAACCTCCATCCTTCCTCCTACTCCGGGAACCAGGGCCTCTGCGGCGGGGTGTTGGCCAAACCCTGCGCTGCCGACGCCCTCGCCGCTACCGCCGATGATCAGGTCGACGTCCGCCGCCAGCAGCCGAAGCGAACAGCCGGTGCAATCGTGTGGATCGTGGCCGCCGCGTTCGGCATCGGGCTCTTCGTGCTGGTTGCCGGGACGCGGTGCTTCCATGCGAACTACAACCGGCGGTTCGGAGAGGAGGTCGGGCCGTGGAAGCTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGACGACGTGCTGGAGTGCTTGTCGTACTTCTTCCTTGGTATGTGTTCCTCTGCAGAATATGCTTACACCCTTCAGGTGGATGAGAAGAGTGACATTTACAGCTATGGAGTGGTGTTGATGGAGATTCTGAGCGGAAAACGTTCTGTGGAAGCAGCATTTGGAGATGGGAACAGCATAGTGGATTGGGTGAGATCAAAGATAAAATCAAAAGATGGAATTGATGACATATTGGACAAAAATGCAGGAGCAGGTTGCAGTTCAGTGAGAGAAGAGATGATTCAGATGCTGAGAATTGCATTGCTTTGCACCAGTAAAAACCCTGCAGACAGACCTTCTATGAGGGATGTTGTGTTGATGCTGCAAGAGGCAAAGCCAAAGAGGAAATTGCAGAATAGTGTTGTAGGTGGATTTGGAGGGGACAATGTCGTTGCTGCTCCCGACATTCCCTTCCCACACAAGCCAATTGCAGAACAATGCTAA


Promoter Sequence:
>Vu_13084::LG3:22781158-22783158(-)
TTGTGGTGTGTGATATATATAAGTAGAGGCCAAAATCGTTCTTAATTAGGGGGTGTTGATTTATGTACTACAGCACTGGTAACAGTGAGAAGAATAATAAAGATAATGAGACATGCATTTTAGAGGAAGAAAAAGATGTTGGATGGCAGTATATGTATGCTCAGTTCTAAGATATTGGGATGAGGATGATTGTGTTTGAAGCTTTATTCTTATCTTAACAAATACTTTAATGACGTTAATGACAGAAAGTAGTAATTGCTCATCATAGTATTGCTTTAGTGAAGTCAAACTGTGCAAAAGCGACAAAATTTAAGCATATTCGGTATTTAATATAGTACCAGTAGTAGTAGTATTAGTTAAGCATCATCAATGAACCCATCATTGTATCCCATTCTTTTCATTAATGCTTTGAAATTGGCAAAACCATTATCTTGAATTTCAAACACCCGCGCCAATTCAGCTCAGAGAATATGCTCTCATTTTATTTTTCGTTTCTTACTCTGCAAGAACTCTTTCTACAAAACAATGGCCGATTCCTCTGACGGTATGTCTCACCAACCACACTTGATTCTGATGAACATAGGTCTGTTAAATAAATGCATATAAAATAGTGCCAGGTGTGTATCTGCTAACTTTAGTAAGGAGGTACCACAGAAAAAAGCATTTCTTAATATCTTTCCGTAATTGGGATAAATTTTGGAAATAACAATATTAAAAAAAAAGTGTGAAATTGATAGATGCTATGGTATGTAATAGAACAGGGTCAAATGGGTTTACATGTACGTACCTGAACTGCCTTCCGGGGTGACAAATTATTACAACATTGCATATTGTGTAAGGAAGCTGAATTTGGGGGAAGATGTGTAATCACATTCCGAATTTGTTTGACGTGTTTTCCGATGGAAAATGCACTGCTAACATATTTGCACAAGTTTGCTGCAACCAGATACAAGGACAGAAAGGAGATTGGGCAATAAGATCATTTTTGTTGTTTATCATTATTTGGCTGGTTCAAGATTTTCATGTTTAAAACTGAGAAAGTTTGGTAAGTTTGTTCTTGTTGCGTCTAATACGTCCAAACAAGGGTCTAATGATCATGAAAATCTGGTCCCAAAATATGGTCACTATTAAGAATGGGGGTGAAGGATTTATTTATATAGATATGCGTGTATCGACACAGCATTCCGTGATTGGGATTATGCAGACATGCTGGAAGTAGCCTATTTAGAATATTTGTGGTCCATACTTAACTGCTTTGGACAAGGTTCTCACCTGAATCTCCATGCTGGAGCCAAGGAATATAACATGGAACTAAAGCCCCAAAATATCACCCTAAAGGAAAAGAATGAAGGGGGAAAATAAAGCAGAAATTAAAGCCTCTACATATATGTGCATAAAGAAGAGGAAAATAAAGAAAAAGAAAAATGGGTTTTTTATTTTAAAATAATGGTTTGGAGGAATATGGTGGGAAATTGAGATGGCTTTCTTGGATCCTGCGAGAGACAATGTCACTGTTACACGTATTTATCAATTTGTTAGCCAAAGATAAAGGAAACAAGGGAATGATGAAAAGTGGGAGCAAAAGAAAAGGAGAAAAGAATTCCGAGAAAATAAAAAAGTATGAGTGGAGATAGCAGACAAAGGTAGAATACTGAGGTAGGAAAGAAAACTAGACAGAGAAAGTGAGATGAGATGATGGTGTAGGAGCTTCAAACAAAGGGACCGAACCGTAGAGAGGTGGATGTAGGTGAATAAATGGTGGTGTGGTATAATAGAAGACGAAGTGGAAGAAGTAGTGGTTAATCTCTCTCTCTCTCTCTCATCCATGTCTTCCAGTACCACCAACAAAACCCACTGAAGCAAATTATCATGATGAAACTCCCTCTGCACCCTGCACTCCGAAAAAGCGATTGCCATCCTCATCAAAATCTTCCTTCCCTTAAATTTACCCCTTTGAACACCACCCCCTTCTCATCCACAACTCCCACCACCCCAAAACC


Gene Sequence:
>Vu_13084(-)
ATGAAACCTTTTCTTCTCTTTCTCACATTCTTCTTCCTCTGCCAAACACACCCACTCCCAGTTCTCTCTGCCACAACCCTGCCTCTCCAACTCATCTCCCTCCTCTCAGTTAAATCATCCCTCCAAGACCCTCTCAATAACCTCCACGACTGGGATCCCTCCTCCACCTTCTCCAACTCCAGTCCCCAACACCCAATATGGTGTTCATGGAGAGGCATCACATGCCACTCCAAAACATCACAGATCACTACCCTCGACCTCTCCCACCTCAATCTCTCCGGCTCAATCTCACCCCAAATCCGCCACCTCTCCACCTTAAACCACCTTAACCTCAGTGGAAATGACTTCAGCGGGAGTTTCCAATTCGCCATTTTTGAACTAGCAGAACTCAGAACTCTAGACATCAGCCACAACTACTTCAACTCAACCTTCCCACCCGGCACATCAAAGCTCAAGTTCCTCAGACACTTCAACGCCTACAGCAACAGCTTCACCGGGCCCCTCCCCCTAGAGTTAACCAGCCTTCGTTTTCTGGAACACCTGAACCTCGGCGGAAGCTACTTCAGTGACAGGATTCCACCAAGCTACGGCACTTTCCCAAGACTCAAGTTTCTAGACTTAGCCGGGAACGCATTGGGAGGTTCGCTTCCACCCCAATTAGGCCACTTGACTGAACTGGAACACTTGGAAATTGGATACAACAATTTCTCAGGAACACTACCTTCGGAACTGTCATTGCTCTCTAATCTCAAATACTTGGACATCTCAACCGCCAACATCTCAGGGAACGTGATTCCAGAGCTGGGAGACCTCACCAACCTGGAGACACTTTTGCTGTTCAAGAACAGGTTAACAGGAGAAATCCCACCAACCATAGGAAGATTGAAGTTTCTAAAAAGCCTTGACCTCTCAGATAACGAACTCACGGGGCCAATCCCCACCCAAGTCACCATGCTAACGGAACTAACCACGCTCAACCTGATGGAAAACAACCTGACCGGAGAAATACCACAGGGAATTGGAGACCTACCAAAGCTTGAGATTCTGTTCCTCTTCAACAACTCACTCACCGGAACCCTCCCTCAGCAACTTGGTTCCAACGGGTTACTACTGAAACTAGACGTTTCCACAAACTCACTCGAAGGTCCAATCCCTGAAAATGTCTGCAAAGGTAACAGGCTCGTGAAACTCATACTCTTTCTCAACAAGTTCAGTCATACCCTTCCACCATCTCTTGGGAGCTGCACCTCACTCGCTAGGGTTCGAATCCAAAACAATTTCCTCAACGGTTCAATCCCCGAAGGCCTCACGCTCCTCCCTAACCTTACATTCCTAGATATCAGCAGCAACAACTTTCAGGGTCCAATTCCGGAACACTTAGGTAACTTGCAGTACTTCAACATCTCCGGAAACTCTTTCGGAACCTCCTTACCTGCGTCTATTTGGAATGCAACTAATCTCGCGATCTTCTCCGCGGCTTCGTCGAACATCACCGGTCAAATTCCAGATTTCATTGGGTGTCAGCAACTGTATAAGCTCGAATTGCAGGGAAATTTCATCAACGGTACGATTCCATGGGACATTGGACACTGCCAGAAGCTGATTTTACTCAATCTGAGTCGAAACTCACTCACCGGAATCATTCCCTGGGAAATCTCCACTCTCCCTTCCATCACCGACGTTGATCTCTCTCACAATTCCCTCACCGGAACCATTCCGTCGAACTTCAACAACTGCTCCACTCTCGAGAATTTCAACGTCAGTTTCAACTCCCTCACCGGTCCAATCCCATCGTCCGGAATCTTCCCGAACCTCCATCCTTCCTCCTACTCCGGGAACCAGGGCCTCTGCGGCGGGGTGTTGGCCAAACCCTGCGCTGCCGACGCCCTCGCCGCTACCGCCGATGATCAGGTCGACGTCCGCCGCCAGCAGCCGAAGCGAACAGCCGGTGCAATCGTGTGGATCGTGGCCGCCGCGTTCGGCATCGGGCTCTTCGTGCTGGTTGCCGGGACGCGGTGCTTCCATGCGAACTACAACCGGCGGTTCGGAGAGGAGGTCGGGCCGTGGAAGCTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGACGACGTGCTGGAGTGCTTGTCGGTGTCCGATAAGATACTAGGAATGGGATCGACGGGAACAGTTTACCGCGCCGAAATGACAGGTGGAGATATCATAGCGGTTAAGAAGCTTTGGGGAAAACAAAAGGAGAATATCCGACGGAGGAGAGGCGTTCTGGCAGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGGAATATCGTGAGGTTGTTAGGGTGCTGCAGCAATAAGGAGTGCACCATGCTGCTCTACGAGTACATGCCCAACGGCAACTTGGATGATTTATTGCATGCCAAAAACAAAGGTGATAATCTCGTCGCTGATTGGTTCACAAGGTACAAGATCGCCTTGGGCGTTGCTCAGGGAATCTCCTACCTCCACCACGACTGCGACCCCGTCATCGTCCATCGCGATCTCAAACCCAGTAACATTCTACTGGACGCCGAGATGGAGGCAAGAGTCGCCGATTTCGGCGTCGCCAAGTTGATTCAGACCGACGAGTCCATGTCCGTCATTGCCGGATCCTACGGCTACATTGCTCCAGGTAACCAACCACCCACACCAACACCAGCTCCTACGTTTTCTTAATTTTTTTTTACTGTTCCAAACCATTCAGCTTACCTTAATTAATCAAAAGAAACAAAAGTTCATTTTTTGATTATCAAATTTACTAAGGTGGTCCATTGGGTGTGTGAAACCAAGTTTGAATGAAGAAAGCAAGCAAGTTAAGGTTAAGGTACGAGCATGAGAGGGACTTTTCCTGCCGAATTTCGGTGCATGGGTAGGCGCACTGTTACGCATGGAGGGAGAAGAAGGCTTTTCCTTTTTTGTTTAAATTTGTTAACTTTGGCGAGCTGATCTCGATGGGGTCCACGTCCACTCATAATATTGTCAATTATCATAACTCCTTTGAATGATGAGGATGTTGACTTGGGGTGCATGTATTTTAATGGTGTTTGTTTTGTAGTTGTCTGAATGAAGCATTAACTAACAGTACTTCTTCCTTGGTATGTGTTCCTCTGCAGAATATGCTTACACCCTTCAGGTGGATGAGAAGAGTGACATTTACAGCTATGGAGTGGTGTTGATGGAGATTCTGAGCGGAAAACGTTCTGTGGAAGCAGCATTTGGAGATGGGAACAGCATAGTGGATTGGGTGAGATCAAAGATAAAATCAAAAGATGGAATTGATGACATATTGGACAAAAATGCAGGAGCAGGTTGCAGTTCAGTGAGAGAAGAGATGATTCAGATGCTGAGAATTGCATTGCTTTGCACCAGTAAAAACCCTGCAGACAGACCTTCTATGAGGGATGTTGTGTTGATGCTGCAAGAGGCAAAGCCAAAGAGGAAATTGCAGAATAGTGTTGTAGGTGGATTTGGAGGGGACAATGTCGTTGCTGCTCCCGACATTCCCTTCCCACACAAGCCAATTGCAGAACAATGCTAA