Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13078 LG3 22716879 22719846 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 22716906 missense_variant p.Thr10Ala
T/C 22716940 missense_variant p.Met21Thr
C/G 22716943 missense_variant p.Ser22Cys
A/G 22716945 missense_variant p.Lys23Glu
G/C 22716949 missense_variant p.Gly24Ala
T/C 22716950 synonymous_variant p.Gly24Gly
T/C 22716952 missense_variant p.Ile25Thr
T/A 22716953 synonymous_variant p.Ile25Ile
A/G 22716959 synonymous_variant p.Gly27Gly
C/T 22716960 synonymous_variant p.Leu28Leu
C/T 22716971 synonymous_variant p.Ala31Ala
T/C 22717011 missense_variant p.Ser45Pro
A/C 22717039 missense_variant p.Tyr54Ser
G/A 22717069 stop_gained p.Trp64*
G/A 22717070 stop_gained p.Trp64*
G/A,C 22717172 synonymous_variant p.Pro98Pro
A/T 22717276 missense_variant p.Tyr133Phe
G/A 22717326 missense_variant p.Glu150Lys
A/C 22717355 synonymous_variant p.Ser159Ser
T/A 22717370 synonymous_variant p.Pro164Pro
C/T 22717520 synonymous_variant p.Ser214Ser
C/G 22717538 synonymous_variant p.Pro220Pro
C/T 22717619 synonymous_variant p.Ile247Ile
C/A 22717658 synonymous_variant p.Ala260Ala
A/G 22717839 missense_variant p.Asn321Asp
G/A 22717895 synonymous_variant p.Ala339Ala
C/T 22718131 missense_variant p.Ser418Phe
G/A 22718457 synonymous_variant p.Thr458Thr
G/A 22718542 missense_variant p.Glu487Lys
G/C 22718612 missense_variant p.Gly510Ala
G/A 22718726 stop_retained_variant p.Ter548Ter
C/T 22718733 synonymous_variant p.Leu550Leu
G/A 22718805 synonymous_variant p.Ser574Ser
T/C 22718807 missense_variant p.Val575Ala
G/C 22718899 missense_variant p.Ala606Pro
A/G 22719129 synonymous_variant p.Thr682Thr
A/T 22719170 missense_variant p.Gln696Leu
G/A 22719303 synonymous_variant p.Ser740Ser
A/G,C 22719311 missense_variant p.Gln743Pro
C/G 22719351 missense_variant p.Asn756Lys
C/G 22719510 upstream_gene_variant
T/A 22719642 missense_variant p.Phe808Ile
C/T 22719646 missense_variant p.Pro809Leu
G/A 22719708 missense_variant p.Ala830Thr
G/T 22719720 stop_gained p.Glu834*
A/T 22719735 missense_variant p.Ser839Cys
A/T 22719777 stop_gained p.Lys853*
T/C 22719841 missense_variant p.Leu874Pro
A/G 22719843 missense_variant p.Ile875Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13078.1
MNNNTCYAITIPAMVVLLLAMSKGISGLTQADALLRWKQSLPDQSILESWVINYTATTQTPCSWRGITCDSQGTVTVINLAYTGLAGTLQNLNLSVFPNLLRLDLKVNNLTGTIPQNIGVLSNLQFLDLSTNYLNGTLPLSIANLTQVFELDVSRNDVSGVLDPSLFPDGSNSPKSGLIGIKNLLFQDTLLGGRIPDEIGNIRNLTLIALDGNSFDGPIPPSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRLFANNLNGTVPPEFGNLSSLIVLHLAENNLVGELPPEVCKSGKLVNFSAAFNSFTGPIPRSLRNCPSLYRVRLEYNRLTGFADQDFGVYPNLTYMDFSYNKVEGGISANWGACKSLQFLNMAGNRVSGYIPGEIFQLDQLQELDLSSNQLLAQIPPQIGNSSNLYNLNLSHNNLSGVLPAEIGKLSSLRLSNLISLNISHNDISGSIPHSLSEVLSLSEINLSNNNLEGRVPEGGIFNSSYSLDLSNNKDLCGHIRGLRPCSVSVSKPDGGSSKRNKAVITIAASLGGALLISLVLVGIFCFSYKRKSRAPRQRNSFGRLNPFSIWYFNGRVVYRDIIEATENFDSRYCIGEGALGKVYKAEMAGGEVFAVKKLKCDSENLDFERIKSFENEVKAMTETRHRNIVKLYGFCSQGVHTFLIYEYMDSGNLYDMLRDEKGAMKLNWHKRVEIIRNVASALSYMHHDCASPLIHRDISSKNVLLSLDLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVSEKCDVFSFGVLALEILTGKHPGDIVSHMQSCSEQKVNMKEILDPRLLPPSKKHLKQVDLIANIALSCLKTNPQSRPSMRSIDQLLEMETANL*


CDS Sequence:
>Vu_13078.1
ATGAATAACAATACGTGTTATGCCATAACAATCCCAGCTATGGTGGTGCTTTTGCTGGCTATGTCTAAAGGTATTTCAGGACTAACACAAGCCGATGCTCTTCTTAGGTGGAAACAAAGTCTACCTGATCAATCCATTTTGGAGTCGTGGGTGATCAACTACACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACGTGTGATTCCCAAGGCACTGTCACTGTCATAAACTTGGCTTATACTGGACTTGCAGGTACCCTTCAAAATCTCAACTTGTCTGTTTTTCCGAACCTTCTTCGTCTTGATCTCAAAGTAAACAATCTCACTGGCACCATACCACAAAACATTGGGGTGCTCTCAAACCTCCAGTTTCTTGACCTTTCCACCAACTATCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTGTCGAGAAATGATGTATCAGGGGTATTAGACCCTTCCCTGTTTCCTGATGGATCAAACAGCCCCAAAAGTGGCCTCATTGGTATCAAGAACCTCCTCTTTCAGGACACCCTGCTGGGTGGCAGAATCCCAGATGAAATAGGGAACATTAGAAACTTGACTCTTATAGCTCTTGATGGAAACAGCTTCGATGGCCCTATTCCCCCTTCTCTTGGCAACTGCACGCATTTAAGCATTCTCAGAATGCCTCAAAACCAACTCTCAGGGCCAATACCTCCCAGTATCGGTAAATTAACCAATCTAACCGATGTGCGCTTGTTCGCCAACAACTTAAATGGTACTGTTCCCCCAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTGGTTGGTGAATTACCACCAGAAGTGTGCAAAAGTGGGAAACTCGTAAATTTTAGTGCAGCCTTTAATAGTTTCACTGGCCCTATTCCAAGAAGCCTTAGAAACTGTCCATCCTTGTACAGGGTTCGACTTGAATACAACCGGCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATCCCAACCTCACTTACATGGACTTCAGCTATAACAAGGTGGAAGGTGGTATTTCTGCAAATTGGGGTGCCTGCAAAAGCTTGCAATTTCTCAACATGGCTGGAAATAGAGTAAGTGGTTACATTCCAGGTGAGATTTTTCAGTTGGACCAACTACAAGAGCTCGACCTATCCTCCAACCAATTGTTAGCACAGATTCCACCACAGATAGGAAATTCCTCCAACTTGTACAACTTAAATTTAAGTCACAACAATCTCTCTGGTGTGTTACCAGCAGAAATTGGAAAACTTTCCAGTTTGCGGCTTTCAAATTTGATAAGCTTGAATATCTCTCACAACGATATTTCAGGTTCCATCCCTCACTCTCTCAGTGAAGTGCTGAGTTTGTCAGAAATCAACCTCTCCAACAATAATTTGGAGGGTCGAGTTCCCGAAGGTGGCATATTCAACTCTTCTTATTCCCTGGATTTGAGCAACAACAAAGATCTTTGTGGGCATATTCGAGGTTTGCGTCCTTGTAGTGTCTCTGTCTCCAAACCTGACGGTGGATCAAGTAAAAGAAACAAGGCTGTGATCACCATTGCAGCTTCCCTTGGAGGTGCTCTTTTGATTTCTCTGGTGTTAGTTGGGATTTTCTGCTTTAGCTACAAGAGAAAATCAAGAGCTCCAAGGCAAAGAAATTCGTTCGGTAGACTGAATCCATTTTCAATCTGGTACTTCAATGGGAGAGTTGTGTATAGAGACATAATTGAAGCTACCGAGAACTTTGATAGCCGATATTGCATTGGGGAAGGAGCACTGGGAAAAGTTTATAAAGCGGAGATGGCAGGAGGTGAAGTATTTGCTGTAAAAAAGTTGAAGTGTGATTCAGAGAACTTAGACTTTGAGAGAATAAAATCCTTTGAGAATGAGGTAAAAGCCATGACAGAAACACGCCACAGAAACATCGTGAAGCTTTATGGATTTTGCTCTCAAGGGGTGCACACCTTTCTAATTTATGAGTACATGGACAGTGGAAACTTATATGACATGCTTAGAGATGAAAAGGGAGCAATGAAACTGAATTGGCACAAAAGGGTTGAAATTATCAGAAATGTAGCAAGCGCTTTGTCTTACATGCACCATGATTGCGCTTCACCTTTAATTCACAGAGACATATCCAGCAAGAACGTTTTGCTGTCCCTCGATCTTTCAGCTCATGTCTCAGATTTTGGAACTGCCAGGTTTCTGAAACCGGATTCTCCCATTTGGACATCATTTGCCGGCACATATGGTTATGCTGCTCCAGAGCTAGCTTACACAATGGCAGTGAGTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTGGAGATTCTTACGGGAAAGCACCCTGGTGATATTGTTTCCCACATGCAAAGTTGTAGTGAACAGAAAGTAAACATGAAAGAGATTTTAGACCCTCGTCTCTTGCCTCCTTCCAAGAAGCATTTGAAGCAAGTTGATTTGATTGCTAACATAGCTCTTTCATGTTTAAAGACAAACCCTCAATCTAGACCAAGTATGCGAAGCATAGATCAGCTGCTTGAAATGGAGACTGCAAACTTATAA


Promoter Sequence:
>Vu_13078::LG3:22714879-22716879(+)
GCTGCAAGGAACCTTGCTGCTAATTATGCAGGTAAGTCAACTACTTCTCTGATAGATTTACCTTTAAATTATAATTACAATTAGTCATATATATAGATATAGATATAGATATAGATAGGTTTATATATATATATATATATATATATATATATATGATGTATGTAATTTTGTAGGTTCAGATGATGAAAGGAGTGTCAGTAGGAGAGGTCTTGGAAGTTCTCCATGTAAGAGGGGAAGACAAACTTCTGAAGTGGCTGAAGGTGAAAGGAGACAGGGAGTTGATAGAAAGCCATATGATAATCCACGTTGCCACAATTATCTGTGATTTATTTGCAGGGGTTCTTTTATGTGTTGCAAATCAAAATAAAACATCACATGTAACTGTGATTTCTGCTACATGCTTTAAAACTATGTTGTAATGTGAACAATCTGTTAAAGTTTTACTAGTGAATGTATTTATTTGGTATTTAAAATGTTATTTCATGATTTTCACATTTTATTTACTTTGGTGCTGGAAAGTATATATATATATATATATATATATATATATATATATATATATATATATATAATTGTACAAACAAATAAATCAAATATTTAAAGTATTAAAGAATTATCAAATAATATTATAAAGTTGCACCACTCACTTTGACTAATTCCCAATATGGAATCTAGTAACATTTTCAGAGAAATAGAGGGTTTGCACTATTTTTTTGGGGCTATTTTACATTTAATTTAATTATTGTATATGTTATTGCTACGATTTCTTAGTTTTTAATAATGATTAATATCTGTTGAGAAAAGCCCAATAATATATTTGACATACTACAGTTGTATTTGATCCACTCATTAAAGAATATCTTTTATGTATTTTTCCGATATTAAACTCAACCTTAAAAATATATATAGCACTATAAAAAAAAATCCAATGATAAACATATATTATTGAGTCACTAAAATTAATACATTTAACGGAAATACAAATTTAACGTGAAAGCATATCAAGATATCAATATATATAAATTACAAAGGTAAACAAGATACACAATAAGTTTTTAAATTAAGTATGTTTAAGACAAGTTCGTATACATTTTTTTAAAATCAAACTTTTATCTATCTGTCTATCTCTATATATTATATTTTTTTTTATTGTAAGATAAATTTTACATGATTTATTTGTTTATTTAATATTTTTTTTCTATTTCCTTTTACAGTTCGTACAAGCATCCATTCAAGTATCTTACAAATTTTCACTTATTTTTCTCTATGTACTTTTCATCCCTTTATATATTATATCTATCATTTTCTTTTTCTATTTTCTCTTTCGTCTATCTCTCTCTGTTTTCTATCCCAATTCACTCCAAAATGAGGTTAAATTTTGTACTTTGGTATAATTAGTATTAAAATTCTTTCATGCATATATTTTTTGGGGTACAATATCATTTATATATTTTTATTGATTTGTTTTTAAAATAGAGATTAAAGGATAAAATAATATTAAAAATTGGTAAAATGTGTAAATAATAATTAAGAAAACTGATGAATGATGTAAAGGTGAGAAGTCAGTGACATCACGACGGTAGATATGCATGCACATGCAGCGTTGGTGGAAATCAGCTTTGGCGGCATCACTCTCTCTTCGAATCCTTGTTGAAGACGAAGATTTAAGTGAAGAAGGAGCTTCCACTGAGTAGTCAATTTTAGCTGGAATCATTAAACCATTCTCATATAAACCACAAAACGCGTTCATAGATTGTCAACTATGCTACCAAGGTCGTCGAGGCTCCCACATGCTGGAAGGAACAGACAAAATCCATAAATGTCTTCATGAAACAAACCAAAATCATGCATCCACACTTTGAAAGAGATAACAAAGGAAAAACAAAGGTAAACGATAGTGATGTGTATAACATGATCAACGTTAATGGCTATTTATATGGTAGGAGTGATCAAATGTAATTATTCCAAAACAAGTAAGGAGTTTCTGATCAACGTTACAA


Gene Sequence:
>Vu_13078(+)
ATGAATAACAATACGTGTTATGCCATAACAATCCCAGCTATGGTGGTGCTTTTGCTGGCTATGTCTAAAGGTATTTCAGGACTAACACAAGCCGATGCTCTTCTTAGGTGGAAACAAAGTCTACCTGATCAATCCATTTTGGAGTCGTGGGTGATCAACTACACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACGTGTGATTCCCAAGGCACTGTCACTGTCATAAACTTGGCTTATACTGGACTTGCAGGTACCCTTCAAAATCTCAACTTGTCTGTTTTTCCGAACCTTCTTCGTCTTGATCTCAAAGTAAACAATCTCACTGGCACCATACCACAAAACATTGGGGTGCTCTCAAACCTCCAGTTTCTTGACCTTTCCACCAACTATCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTGTCGAGAAATGATGTATCAGGGGTATTAGACCCTTCCCTGTTTCCTGATGGATCAAACAGCCCCAAAAGTGGCCTCATTGGTATCAAGAACCTCCTCTTTCAGGACACCCTGCTGGGTGGCAGAATCCCAGATGAAATAGGGAACATTAGAAACTTGACTCTTATAGCTCTTGATGGAAACAGCTTCGATGGCCCTATTCCCCCTTCTCTTGGCAACTGCACGCATTTAAGCATTCTCAGAATGCCTCAAAACCAACTCTCAGGGCCAATACCTCCCAGTATCGGTAAATTAACCAATCTAACCGATGTGCGCTTGTTCGCCAACAACTTAAATGGTACTGTTCCCCCAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTGGTTGGTGAATTACCACCAGAAGTGTGCAAAAGTGGGAAACTCGTAAATTTTAGTGCAGCCTTTAATAGTTTCACTGGCCCTATTCCAAGAAGCCTTAGAAACTGTCCATCCTTGTACAGGGTTCGACTTGAATACAACCGGCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATCCCAACCTCACTTACATGGACTTCAGCTATAACAAGGTGGAAGGTGGTATTTCTGCAAATTGGGGTGCCTGCAAAAGCTTGCAATTTCTCAACATGGCTGGAAATAGAGTAAGTGGTTACATTCCAGGTGAGATTTTTCAGTTGGACCAACTACAAGAGCTCGACCTATCCTCCAACCAATTGTTAGCACAGATTCCACCACAGATAGGAAATTCCTCCAACTTGTACAACTTAAATTTAAGTCACAACAATCTCTCTGGTGTGTTACCAGCAGAAATTGGAAAACTTTCCAGTTTGCGGTCCTTAGATCTGTCCATGAACGTGCTGTTCGGATCAATCCCAAAGCAGATAGGTGACCTCTCAAACTTGCAAAATTTAAATCTAAGCTACAACAAATTCAATGGCACAATCCCCTACCAAATTGGAAACCTTGCAGATTTACAATATTTTTTGGATTTGAGTTACAATTCTCTTTCAGGAGATATTCCCGGTGATATTGGCAGGCTTTCAAATTTGATAAGCTTGAATATCTCTCACAACGATATTTCAGGTTCCATCCCTCACTCTCTCAGTGAAGTGCTGAGTTTGTCAGAAATCAACCTCTCCAACAATAATTTGGAGGGTCGAGTTCCCGAAGGTGGCATATTCAACTCTTCTTATTCCCTGGATTTGAGCAACAACAAAGATCTTTGTGGGCATATTCGAGGTTTGCGTCCTTGTAGTGTCTCTGTCTCCAAACCTGACGGTGGATCAAGTAAAAGAAACAAGGCTGTGATCACCATTGCAGCTTCCCTTGGAGGTGCTCTTTTGATTTCTCTGGTGTTAGTTGGGATTTTCTGCTTTAGCTACAAGAGAAAATCAAGAGCTCCAAGGCAAAGAAATTCGTTCGGTAGACTGAATCCATTTTCAATCTGGTACTTCAATGGGAGAGTTGTGTATAGAGACATAATTGAAGCTACCGAGAACTTTGATAGCCGATATTGCATTGGGGAAGGAGCACTGGGAAAAGTTTATAAAGCGGAGATGGCAGGAGGTGAAGTATTTGCTGTAAAAAAGTTGAAGTGTGATTCAGAGAACTTAGACTTTGAGAGAATAAAATCCTTTGAGAATGAGGTAAAAGCCATGACAGAAACACGCCACAGAAACATCGTGAAGCTTTATGGATTTTGCTCTCAAGGGGTGCACACCTTTCTAATTTATGAGTACATGGACAGTGGAAACTTATATGACATGCTTAGAGATGAAAAGGGAGCAATGAAACTGAATTGGCACAAAAGGGTTGAAATTATCAGAAATGTAGCAAGCGCTTTGTCTTACATGCACCATGATTGCGCTTCACCTTTAATTCACAGAGACATATCCAGCAAGAACGTTTTGCTGTCCCTCGATCTTTCAGCTCATGTCTCAGATTTTGGAACTGCCAGGTTTCTGAAACCGGATTCTCCCATTTGGACATCATTTGCCGGCACATATGGTTATGCTGCTCCAGGTGAATGACTCAAACTCATTGTCTTATAGTTTTGTTTGAAGTTGTCAGTTTTTGAACTCAAATCTCATTAATACTGTATTTTCTCGTTATATCCATCACTTGTTCACAAAATTGAGTAATCTTGACTGTGGTGCAGAGCTAGCTTACACAATGGCAGTGAGTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTGGAGATTCTTACGGGAAAGCACCCTGGTGATATTGTTTCCCACATGCAAAGTTGTAGTGAACAGAAAGTAAACATGAAAGAGATTTTAGACCCTCGTCTCTTGCCTCCTTCCAAGAAGCATTTGAAGCAAGTTGATTTGATTGCTAACATAGCTCTTTCATGTTTAAAGACAAACCCTCAATCTAGACCAAGTATGCGAAGCATAGATCAGCTGCTTGAAATGGAGACTGCAAACTTATAA