Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13077 LG3 22710714 22713658 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 22710759 missense_variant p.Ala16Ser
C/G 22710787 missense_variant p.Ser25Cys
G/C 22710793 missense_variant p.Gly27Ala
T/C 22710794 synonymous_variant p.Gly27Gly
T/C 22710796 missense_variant p.Ile28Thr
A/G 22710803 synonymous_variant p.Gly30Gly
C/T 22710804 synonymous_variant p.Leu31Leu
T/C 22710815 synonymous_variant p.Ala34Ala
A/T 22710818 missense_variant p.Glu35Asp
G/T 22710833 missense_variant p.Trp40Cys
C/T 22710861 synonymous_variant p.Leu50Leu
A/G 22710890 synonymous_variant p.Ala59Ala
T/C 22710977 synonymous_variant p.Leu88Leu
C/A 22710986 synonymous_variant p.Thr91Thr
C/G 22711016 synonymous_variant p.Pro101Pro
G/A 22711018 missense_variant p.Ser102Asn
T/C 22711055 synonymous_variant p.Thr114Thr
A/G 22711071 missense_variant p.Asn120Asp
A/T 22711120 missense_variant p.Tyr136Phe
G/C 22711191 missense_variant p.Asp160His
A/C 22711199 synonymous_variant p.Ser162Ser
G/A 22711203 missense_variant p.Val164Ile
C/T 22711226 synonymous_variant p.Pro171Pro
T/C 22711259 synonymous_variant p.Ile182Ile
G/C 22711292 synonymous_variant p.Leu193Leu
C/A 22711301 synonymous_variant p.Gly196Gly
C/T 22711364 synonymous_variant p.Ser217Ser
C/T 22711384 missense_variant p.Pro224Leu
C/T 22711463 synonymous_variant p.Ile250Ile
T/G 22711490 synonymous_variant p.Val259Val
T/G 22711496 missense_variant p.Phe261Leu
T/G 22711500 missense_variant p.Ser263Ala
T/C 22711625 synonymous_variant p.Leu304Leu
G/A 22711739 synonymous_variant p.Ala342Ala
T/C 22711782 missense_variant p.Phe357Leu
G/A 22711786 missense_variant p.Ser358Asn
T/C 22711787 synonymous_variant p.Ser358Ser
C/T 22711788 missense_variant p.His359Tyr
T/C 22711790 synonymous_variant p.His359His
A/T 22711794 missense_variant p.Arg361Trp
C/T 22711811 synonymous_variant p.Leu366Leu
G/A 22711822 stop_gained p.Trp370*
G/A 22711824 missense_variant p.Gly371Ser
C/T 22711829 synonymous_variant p.Ala372Ala
C/T 22711832 synonymous_variant p.Cys373Cys
A/T,C 22711835 missense_variant p.Lys374Asn
C/A 22711842 missense_variant p.Gln377Lys
G/A 22711854 missense_variant p.Val381Met
T/C 22711855 missense_variant p.Val381Ala
G/A 22711857 missense_variant p.Ala382Thr
C/T 22711877 synonymous_variant p.Gly388Gly
G/A 22711904 upstream_gene_variant
G/T 22711919 upstream_gene_variant
G/T 22711959 upstream_gene_variant
G/A 22711964 upstream_gene_variant
T/A 22711967 upstream_gene_variant
T/A 22711987 upstream_gene_variant
G/A 22712002 upstream_gene_variant
T/A 22712016 upstream_gene_variant
C/A 22712017 upstream_gene_variant
G/T 22712114 upstream_gene_variant
T/C 22712207 upstream_gene_variant
C/T 22712232 upstream_gene_variant
G/A 22712242 upstream_gene_variant
T/G 22712259 upstream_gene_variant
C/G 22712342 missense_variant p.Gln402Glu
A/G 22712367 missense_variant p.Gln410Arg
A/T 22712396 missense_variant p.Arg420Trp
A/C 22712549 missense_variant p.Ile471Leu
G/T 22712559 missense_variant p.Arg474Met
T/G 22712567 missense_variant p.Tyr477Asp
T/A 22712621 stop_lost p.Ter495Lysext*?
A/C 22712648 missense_variant p.Lys504Gln
G/A 22712657 missense_variant p.Glu507Lys
T/C 22712881 upstream_gene_variant
T/C 22712918 upstream_gene_variant
A/G 22712986 upstream_gene_variant
G/T 22713005 upstream_gene_variant
T/C 22713044 upstream_gene_variant
G/A 22713056 upstream_gene_variant
C/T 22713083 upstream_gene_variant
T/C 22713103 upstream_gene_variant
A/T 22713112 upstream_gene_variant
T/C 22713170 upstream_gene_variant
G/A 22713171 upstream_gene_variant
A/C 22713224 upstream_gene_variant
T/A 22713303 upstream_gene_variant
T/A 22713389 missense_variant p.Val584Asp
T/G 22713390 synonymous_variant p.Val584Val
A/G 22713528 synonymous_variant p.Glu630Glu
T/A 22713537 missense_variant p.Phe633Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13077.1
MINRKSYVCLAKAIPATLVLLLAMSEGISGLTQAEALLRWKQSLPDQPILESWVINSTATTQTPCSWRGITCDSQGTVTVINLAYTGLAGTLQNLNLSVFPSLLRLDLKVNNLTGTIPQNIGVLSNLQFLDLSTNYFNGTLPLSIANLTQVFELDVSRNDVSGVLDPSLFPDGSNSPKSGLIGIRNLLFQDTLLGGRIPDEIGNIRNLTLLALDGNSFDGPIPPSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRFFSNNLNGTVPPELGNLSSLIVLHLAENNLVGELPPEVCKSGKLVNFSAAFNSFTGPIPRSLRDCPSLYRVRLEYNRLTGFADQDFGVYPNLTYMDFSHNRVEGDLTANWGACKNLQYLSVAGNGISGNIPSSIPDSLSKMVSLSAINLSNNNLEGPVPEGGVFNSSHSVDLSNNENLCGNVQGLKPCNVSLTKPDGGGSSNKKVVIAIVASLGGALIISLVCVGIVFFCCKRNSRVRRQKSSIKKLNPFSIWYFNGRVVYGDIIEATKNFDNHYCIGEGALGKVYKAEMKGQVYAVKKLKCDAENLDIDKLAYTMAVTEKCDVFSFGVLALEILTGKHPGDLVSYIQSTSQQKIDFKEILDPRLSSPSKNNILKELALIANLALACLQTNPQSRPTMRYIAQLLEMDTADLR*


CDS Sequence:
>Vu_13077.1
ATGATCAACCGTAAGTCTTATGTTTGCCTTGCAAAGGCAATTCCAGCTACGTTGGTGCTTTTGCTGGCTATGTCTGAAGGTATTTCAGGACTAACACAAGCTGAAGCTCTTCTTAGGTGGAAACAAAGTCTACCTGATCAACCCATTCTGGAGTCGTGGGTGATCAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACGTGTGATTCCCAAGGCACTGTCACTGTCATAAACTTGGCTTATACTGGACTTGCAGGTACCCTTCAAAATCTCAACTTGTCTGTTTTTCCCAGCCTTCTTCGTCTTGATCTCAAAGTAAACAATCTCACTGGCACCATACCACAAAACATTGGGGTGCTCTCAAACCTCCAGTTTCTTGACCTTTCCACCAACTATTTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTGTCGAGAAATGATGTATCAGGGGTATTAGACCCTTCCCTGTTTCCCGATGGATCAAACAGCCCCAAAAGTGGCCTCATTGGTATCAGGAACCTCCTCTTTCAGGACACCCTGCTGGGTGGCAGAATCCCAGATGAAATAGGGAACATTAGAAACCTGACTCTTCTAGCTCTTGATGGAAACAGCTTCGATGGCCCTATTCCGCCTTCTCTTGGCAACTGCACGCATTTAAGCATTCTCAGAATGCCTCAAAACCAACTCTCAGGGCCAATACCTCCCAGTATCGGTAAATTAACCAATCTAACCGATGTTCGCTTTTTCTCCAACAACTTAAATGGTACTGTTCCCCCAGAATTAGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTGGTTGGTGAGTTACCACCAGAAGTGTGCAAAAGTGGGAAACTTGTAAATTTTAGTGCAGCCTTTAATAGTTTCACTGGCCCTATTCCAAGAAGCCTTAGAGACTGTCCATCCTTGTACAGGGTTCGACTTGAATACAACCGGCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATCCCAACCTCACTTACATGGACTTCAGTCATAACAGGGTGGAAGGTGACCTCACTGCAAATTGGGGTGCCTGCAAAAACTTGCAATATCTCAGCGTGGCTGGGAATGGAATAAGTGGCAACATTCCAAGTTCAATCCCTGACTCCCTCAGTAAAATGGTCAGTTTGTCAGCCATCAACCTCTCCAACAACAATTTGGAGGGTCCAGTTCCCGAAGGTGGTGTGTTCAACTCTTCTCATTCCGTGGATTTGAGCAACAACGAAAATTTATGTGGAAATGTTCAAGGTTTGAAACCTTGTAATGTCTCTCTCACTAAACCTGATGGTGGTGGATCAAGTAACAAAAAGGTTGTGATCGCAATAGTTGCATCCTTGGGAGGTGCTCTTATTATTTCTTTGGTGTGTGTTGGGATTGTTTTCTTTTGCTGCAAGAGAAATTCTAGAGTAAGAAGACAAAAGAGTTCAATAAAAAAACTGAATCCATTTTCCATTTGGTACTTCAACGGCAGAGTTGTGTACGGAGACATAATCGAAGCCACCAAGAACTTTGACAACCACTATTGCATTGGGGAAGGAGCATTGGGAAAAGTTTATAAAGCAGAGATGAAAGGTCAAGTATATGCGGTGAAAAAGTTGAAGTGTGATGCAGAAAACTTAGACATTGACAAGCTTGCATACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAGTTTTGGCTTTGGAGATTCTCACGGGAAAGCACCCTGGTGACCTTGTTTCCTACATACAAAGTACCAGTCAACAGAAAATAGACTTCAAAGAGATTTTAGACCCTCGTCTCTCGAGTCCTTCCAAGAACAATATTTTGAAGGAATTGGCATTGATTGCAAACCTTGCTCTTGCATGTTTACAAACCAATCCTCAATCTCGACCAACTATGCGATACATAGCTCAACTTCTTGAAATGGATACTGCTGATCTGAGATAG


Promoter Sequence:
>Vu_13077::LG3:22708714-22710714(+)
GTTGGTTAATTAATCATAAATAAATTTATTTTATATATACATATGTATGACTATATATATATATATATATATATATATATATATATATATATATATATTATATTTACAAGTAATTATATTAAGTATAACAGAAATAATGAAAGGTTCTTTTGATATTTACATGTTTTATTAGATTTAGTTTCCTCCAATTTTAGAGTAATATTTGAAAAATCGTACTTCTATAACTTATTAATTTGATAGTATGTAATGGTATAATTTGCAAACATGAAAAGCTATCATTAATTTATTTTTCTGTGTTTTAATAAATGTAGTTATCCATATATATATATATATATATATATATATATATATATATATATACACGTTGCTAATTTAAATGTTCTGATGCTATGTATATCATAATAATATATTGGTTTTGATATTTTTATTTGGATTAGTCTTTATATTTGTTTTTGAGGAATTCTATAAAACAAAGTTATTCTCTGAATTCTATTAATAAATACATTCAATGTATTAATATAAATCATATGTATATTTGTTAAGCCAAACATAAAGAAAATTAAATTTAGGGACTCAAAAGTTGAGTTAGATATATAGAACTAGTCACTAATGTATACGGTTTAATTTTAATAGGATAGAAAATAAGAAATATAAGATTTACTTAGTGGTAAAGTTGAAAAGGAGAGTGGAATAAAATTACATTATTATAAAAATATTTATTTATGGTAGTTTTATTTAAATTATTAATGATTAATTGTCATATGTATTTATTAAAAAAACTTAATATGTAATTAATATATATTTAATTACTTTAATCACTACCCGAGTTTAAACAAGGAGTTTTATTAAATAAAAAACTTTAACTGAAAAGATTTGATGGTTTATATCGATAAAAAGGATATGCATTCTTGATAATAAAAGGATTAATCTATAGAAATTTTTTATAAGTAAAAAAAAAAATATATATATATATATATATAATTGTAGCTAGATATAGTAAAAAAGCTAAATTTAAATATATAGTTATTGAAGTTTGTCACTCAAACTACTTTTCTAAGTAAAAGTATGCATGCATTTCATTCAATTATATTAATTTAAAAATAGTTAAAATATAATTGATCTGAATTTCATCATGGGCAAGTGTATAAAATCTTTATAGTCATTGGAGTCTTTTTTACACAAAGCATGCAGATGCAAAATTTCATTATTGATCACGGAATCTCTTTGAATTTGTATGCCTACGTTAATATCATTATACATTGATGAACAAAGAAATTCAATATATAACTTTTGAACGTTGATTTCTCATTTCTATTTCTCGAAATGTCGATTAAACTTTGTTTACTGTTTTATTTTGGTCAAATACTCGTCACATTTTTTTTAATATAGAAAGTGACATTACATATTGGTGACTTTGATTATTCTGTGATTAGGGGTAGTTATATACTCTGCCACCAACCCATTAATACTATTCAATAGCCATGACAAACTCGTATTATAATTATTAATTAAGTCAACTCTTAAAGATATAAATTATTTCTTGTTATCTTCATCTTACAAATAATTTACAATATTATAGTTAAAGATATAATATAGTTAAAACCATCAGCAAACCGAAATGCAAGTTCTCATATAACTAACAGTCACAATCAAAATTTGGTTGAATAACACTTAGAAAAAAAAATCTCATTCAACTTTCCTTTTGCGTGTCGGTGTGAATGTGCTAAATTACCTTCAAAAGGTATAACAACAACTTGACCAACACATGACAACATTATTCTTTCTCATATTAAACTTCTTATAATAACACTTTTTTTCTTATCTTCAACTAATTTTAGTAATCAAAATACCATCATGTTCCCATTTGCAATCAACTATACTTATCTATGGCCTTTGGAATCCATGGGAATCAGATTCAAAATAAGTGAAGACAGCTACGTAAAAAGTTTTCACTAAAAAAACAGACGACAAACTGCTTTCAGTTTTCCGACATTACAACA


Gene Sequence:
>Vu_13077(+)
ATGATCAACCGTAAGTCTTATGTTTGCCTTGCAAAGGCAATTCCAGCTACGTTGGTGCTTTTGCTGGCTATGTCTGAAGGTATTTCAGGACTAACACAAGCTGAAGCTCTTCTTAGGTGGAAACAAAGTCTACCTGATCAACCCATTCTGGAGTCGTGGGTGATCAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACGTGTGATTCCCAAGGCACTGTCACTGTCATAAACTTGGCTTATACTGGACTTGCAGGTACCCTTCAAAATCTCAACTTGTCTGTTTTTCCCAGCCTTCTTCGTCTTGATCTCAAAGTAAACAATCTCACTGGCACCATACCACAAAACATTGGGGTGCTCTCAAACCTCCAGTTTCTTGACCTTTCCACCAACTATTTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTGTCGAGAAATGATGTATCAGGGGTATTAGACCCTTCCCTGTTTCCCGATGGATCAAACAGCCCCAAAAGTGGCCTCATTGGTATCAGGAACCTCCTCTTTCAGGACACCCTGCTGGGTGGCAGAATCCCAGATGAAATAGGGAACATTAGAAACCTGACTCTTCTAGCTCTTGATGGAAACAGCTTCGATGGCCCTATTCCGCCTTCTCTTGGCAACTGCACGCATTTAAGCATTCTCAGAATGCCTCAAAACCAACTCTCAGGGCCAATACCTCCCAGTATCGGTAAATTAACCAATCTAACCGATGTTCGCTTTTTCTCCAACAACTTAAATGGTACTGTTCCCCCAGAATTAGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTGGTTGGTGAGTTACCACCAGAAGTGTGCAAAAGTGGGAAACTTGTAAATTTTAGTGCAGCCTTTAATAGTTTCACTGGCCCTATTCCAAGAAGCCTTAGAGACTGTCCATCCTTGTACAGGGTTCGACTTGAATACAACCGGCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATCCCAACCTCACTTACATGGACTTCAGTCATAACAGGGTGGAAGGTGACCTCACTGCAAATTGGGGTGCCTGCAAAAACTTGCAATATCTCAGCGTGGCTGGGAATGGAATAAGTGGCAACATTCCAAGTGAGATTTTTCAGTTGGACCAACTACAAGAGCTTGACCTATCCTCCAACCAAATATCAGGAGAGATTCCTGCACAGATTGGAAATTCCTCCAACTTGTTTCAATTAAATTTGAGTGGAAACAAACTTTCTGGCATGGTACCAGTAGAAATTGGAAAGCTTTCCAATTTGCGATCCTTAGACCTCTCTATGAACATGCTACTGGGACCAATCCCCAATCAGATAGGGGACATCTCAAACTTGCAGAATTTAAATCTTAGCAACAATAACTTTAATGGCTCAATCCCCTACCAAGTTGGAAATCTTGCATCTTTACAAGATTTTTTGGACTTGAGTTTCAATGCACTTTCAGGAGGAATTCCTTCTGATCTTTGGAAGCTTTCAAATTTGGTAAGCTTGAATATCTCTCACAACAATCTGACAGGTTCAATCCCTGACTCCCTCAGTAAAATGGTCAGTTTGTCAGCCATCAACCTCTCCAACAACAATTTGGAGGGTCCAGTTCCCGAAGGTGGTGTGTTCAACTCTTCTCATTCCGTGGATTTGAGCAACAACGAAAATTTATGTGGAAATGTTCAAGGTTTGAAACCTTGTAATGTCTCTCTCACTAAACCTGATGGTGGTGGATCAAGTAACAAAAAGGTTGTGATCGCAATAGTTGCATCCTTGGGAGGTGCTCTTATTATTTCTTTGGTGTGTGTTGGGATTGTTTTCTTTTGCTGCAAGAGAAATTCTAGAGTAAGAAGACAAAAGAGTTCAATAAAAAAACTGAATCCATTTTCCATTTGGTACTTCAACGGCAGAGTTGTGTACGGAGACATAATCGAAGCCACCAAGAACTTTGACAACCACTATTGCATTGGGGAAGGAGCATTGGGAAAAGTTTATAAAGCAGAGATGAAAGGTCAAGTATATGCGGTGAAAAAGTTGAAGTGTGATGCAGAAAACTTAGACATTGACAGTATAAAAACCTTTCAGCATGAGGTAGAAGCGATGTCAGAAACACGCCACCGAAACATAATCAAGCTTTATGGATTTTGCTCTGAAGGGATGCACACATTTTTAATCTATGAGTACATGAACAGAGGGAACTTATCAGACATGCTGAAAGATGAGAAGGAAGCATTAGAACTAGATTGGCCTAAGAGGGTTGACATTGTGAAAGGTGTGGCAAGCGCTTTGTCCTATATGCATCACGATTGTTCTCCCCCTTTAATTCACAGAGACATATCAAGCAACAACATTTTACTCTCCTACGATCTTTCAGCTCATGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCAGGATTCACCTATTTGGACATCATTTGCCGGAACATATGGTTATGCTGCTCCAGGTGAACTTGTCTTACTCTTATTTATCTTTGAAATGTATGCTAGTTTGAAATTCAACTTTTTTGTTCTTTTTGGAAACTGACTAATATTCACTGTGCTGCAGAGCTTGCATACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAGTTTTGGCTTTGGAGATTCTCACGGGAAAGCACCCTGGTGACCTTGTTTCCTACATACAAAGTACCAGTCAACAGAAAATAGACTTCAAAGAGATTTTAGACCCTCGTCTCTCGAGTCCTTCCAAGAACAATATTTTGAAGGAATTGGCATTGATTGCAAACCTTGCTCTTGCATGTTTACAAACCAATCCTCAATCTCGACCAACTATGCGATACATAGCTCAACTTCTTGAAATGGATACTGCTGATCTGAGATAG