Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12966 LG3 21908434 21910652 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, sequence-specific DNA binding, protein binding
SNP Position Effect Amino acid change
C/G 21908680 3_prime_UTR_variant
A/G 21908815 3_prime_UTR_variant
A/C 21908951 synonymous_variant p.Pro544Pro
A/T 21909039 missense_variant p.Leu515Gln
A/T 21909069 missense_variant p.Met505Lys
G/A 21909208 synonymous_variant p.Leu459Leu
G/C 21909350 synonymous_variant p.Ala411Ala
G/A 21909407 synonymous_variant p.Ala392Ala
G/T 21909942 missense_variant p.Ala214Glu
G/A 21910044 missense_variant p.Pro180Leu
G/T 21910056 missense_variant p.Pro176Gln
G/C 21910127 synonymous_variant p.Arg152Arg
A/T 21910146 missense_variant p.Phe146Tyr
G/T 21910229 synonymous_variant p.Ser118Ser
A/T 21910372 missense_variant p.Leu71Ile
T/A 21910410 missense_variant p.His58Leu
G/T 21910420 missense_variant p.His55Asn
T/G 21910425 missense_variant p.His53Pro
T/A 21910437 missense_variant p.His49Leu
A/T 21910615 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12966.1
MKCCDVICRGEEGMAYMCADSGNLMAIAQQVIKQKQQQEQQQQKQHQQHHQHHHHHHHHHHHQHHLNPLSLHPIPWNNTPTLGYPLHPTDFPDPFQPDPPFHFPDTQSAPAPANFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPSSDTTAAATSLPLQPTPPPPPQEPVNAGLSSEPESAHPLLKALTECASLVESEPDQAAESLARLRKSVSQHGNPTQRVGFYFCEALSRKIWAEQDKGEPKSAKTTTSEELTLSYKALNDACPYSKFAHLTANQAILEATEDASNIHILDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAIALGASPGPSLSATGNRLSEFAKLLDLNFEFTPILTPIHDLDRKSFCIDPDEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASLTRVGFVNRFKTAFRYFSAVFESLDPNLAADSPERFQVESLLLGRRIDAVIGPGPVRESMEDREQWRALMERAGFESVSLSHYAVSQAKILLWNYGYSSLFSLLESTPPGFLTLAWKDVPLLTLSSWR*


CDS Sequence:
>Vu_12966.1
ATGAAATGCTGTGATGTGATTTGCAGAGGAGAAGAGGGAATGGCTTACATGTGTGCAGACAGTGGAAACCTTATGGCCATTGCGCAGCAAGTCATCAAGCAGAAGCAGCAGCAAGAACAGCAGCAGCAGAAACAGCACCAGCAGCACCACCAACATCATCATCATCATCACCATCACCACCATCACCAACACCATCTCAACCCTCTCTCCTTACATCCAATTCCATGGAACAACACTCCCACTCTCGGCTACCCTCTCCATCCCACCGACTTCCCCGACCCCTTCCAACCCGATCCCCCATTCCACTTCCCGGACACGCAATCCGCACCCGCACCGGCCAACTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCTCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCCGATTTCCCCTTCCCCTCCGATCTCAACCGCCTCATCTTCCCCTCCTCCGACACTACCGCCGCCGCTACATCGCTCCCGCTCCAACCAACACCTCCCCCGCCGCCGCAGGAACCAGTCAACGCCGGCCTCTCCTCCGAACCCGAGTCCGCTCACCCGCTCCTCAAAGCCCTAACAGAGTGCGCCTCCCTCGTGGAAAGCGAACCGGATCAGGCCGCGGAATCCCTCGCCCGGCTGAGAAAATCAGTATCCCAGCACGGAAATCCCACTCAGCGAGTGGGCTTTTACTTCTGCGAAGCCCTCTCCCGTAAAATATGGGCCGAGCAGGACAAGGGAGAGCCCAAAAGTGCGAAGACAACCACCTCAGAGGAGTTGACGCTGTCTTACAAAGCCCTCAACGATGCCTGCCCGTACTCCAAGTTCGCACACTTAACCGCCAACCAAGCCATCTTGGAAGCCACCGAAGACGCCTCCAACATACACATCCTGGACTTCGGCATCGTCCAAGGGATTCAGTGGGCCGCGCTCTTGCAGGCTTTCGCCACTCGCTCTTCCGGAAAGCCCAATAAGATCAAAATCTCTGGGATTCCCGCCATCGCTCTTGGGGCCTCGCCCGGCCCATCTCTCTCCGCCACCGGCAACCGCCTCTCCGAGTTCGCGAAGCTCCTCGACCTGAACTTCGAGTTCACGCCTATTCTCACTCCCATTCACGACCTCGACCGCAAGAGCTTTTGCATTGACCCCGACGAGGCCCTGGCGGTGAACTTCATGCTCCAGTTGTACAACCTACTTGACGAGCCCCCGACCGCCGTTGACACCGCCCTCCGGTTGGCGAAATCTCTCAACCCCAAAATCGTTACCCTCGGCGAGTACGAGGCAAGCTTGACACGTGTCGGCTTTGTGAACCGCTTCAAGACCGCGTTCAGGTACTTCTCCGCTGTTTTCGAGTCGCTGGACCCTAACTTGGCCGCGGACTCACCGGAGAGGTTTCAGGTGGAGAGTCTTCTCCTGGGGCGGCGAATCGACGCGGTGATTGGGCCTGGGCCGGTGAGGGAGAGCATGGAGGACAGGGAGCAGTGGAGGGCTCTGATGGAACGTGCTGGGTTTGAGTCTGTGAGTCTGAGTCATTATGCAGTTAGTCAGGCGAAGATACTTCTCTGGAATTACGGTTACAGCTCTCTGTTTTCGCTGCTTGAATCCACGCCGCCTGGCTTCTTAACTCTCGCTTGGAAAGATGTTCCTCTCTTGACTCTCTCCTCGTGGCGCTAA


Promoter Sequence:
>Vu_12966::LG3:21910652-21912652(-)
GTGAACAGAGAAATCAGTCCAAACAAACACAGTCTTAATACGGATTTGCAAATTCTGAGACTGATTAAGAGAGGGAAAACGGTGATTAACTGAAATTAATTAAAAAGATTTGAAATTGATCAGTAAAGGAGTTGACTGGATGATGACGTGGGATGAGTGGAATACACGGAGAATGAGAAGAGATGAAAGCGAGAGATAATGAATGAAAAATCCCGTCAAAATATCCTGCACCGCTGCTTTCCATTCCGTTTCACCATATTTCCACTTCCGTTGGTCCAAAACACCTGGGTCCCACTTTTCCTACTACTACCCTCTACTCCTGTGGACCCCACCAACCGCCCTCAAAATTAACACCCCACACCCTTTTTTTATTAATTTTAAATAATTAAGATATCTGAATATAAATAATTATTTTTAACTATATACTTGAAATGAACAGAGTCACAGAAAGTTTCTATTAAATTTAATATTTCATTTACTAAATCAACAAATTGAATGAACAGTACTTTAAATTTTTGCAGTGCTGTCACACTATTTTGCTGCTGTAAGCTGACATGTGTACAGTCTCGTGGCAGCTGGACCTACTAATGTTAGAGTGTGATACTATTTTTCAGAACATAAGATCGTTTTTCTTATTTATTTACATATTTTCTACTAAATTATAAAAATGGGGTAAAAAGAAAACTGAATGGAACTATGTGCCTGTCGAGTGGACCAGCCAGGGAAAATAAAATACTGTACAATTTAATACTATCATACGTATTTAATTGTTATTAATTATTATGAAACGTTAACATTATTTTTAGATAATTTTATATGTTTTCCTTTTCTGAAACAAACGAAGTGTGAAACTATGTTTTGTTTTGATAAGACGTAAAAGTCTGTTATTTCCATACGTTTCGAATGTAAAACAACAATAAGACAACGTTCAACAGCATACGAAATATGGACTAAACTACAAAATGAGTAAATGTTGTGCAAATAATACTTTTGTAGACAATAATCACGTTCAAGACGTCCTTTTAAAAACTAAAATCAAACATTTCCTTATTTACTTAAAACTAAAAGTGTATTTAACCTACAAATAATAATTTCTTATGACATCAACCGGTCACAAATAGTAAACTATTTATTATCCATAAGACGTAAAATGAATTTTGATTAATTGAAAATGCAAAATAAGTTTATGTATAAAATGTAAAGTGGCGAAATAAGAGTAATGATGTTTAAGAAAGGTTTAATGGTGTTAATTTTTAAAAGAAAACGTGCAAGTAAAGATTATTAATTAAAGAAAAAAAGAGTGTGACATTAAATATACACAGAAGTTTGTTTTGTCAGCGATCCGATTTAACTGTTGTATGGATAATAATGCATCGCATGTGGTTAAGACGGAATCGATTGGATAACTAGAAATGAAGTCACATGCGGGGTCACGTGAGTTTCCGTAAAAATAAAAATAGTACTCCGCGAAGCAAATAAGGAAATATTAAAATGACTGTAATAATGATTTATTTAATTTTCCAAATCAGTACTAGAATTCGAAACTTTACAGTATTAGATTGGAATAAATCGTAAAAATGTGGATTTGGTAAGGTTCAAAAGCAGAAGCATTGCGAAAAGAGGTTAACTGGGATAAATAAAATTAAAATATATATACAATAGATAAATAATATTAATAATAAAATGAAAATTGAAAGTGGGACCATGGGGATGGCGTCTTTTTGAAATGGCTTTAATCAGGTTGTCGTTCTAGGTTGCCTTGCTTGTTGGTTCTCTCTCTCTCTCTCGCTCTTTCTTTCTCTCTCTTTAATCTCTCATCGCTTCAACGGTTCAATCAATCAAGCCTCACTCACTAACACACCCACTCAGCCCTTACCTTTTTTTCTTTGATTGAGTTCACACTTCATACTGCACCCAACTCGAGCCAAGCAAACCCGGTTGCCACTGAATCGGATCGTCCGAAATATTATTTATATTATTGTATACATAGGTAGGCTTCT


Gene Sequence:
>Vu_12966(-)
ACTACTACTACTACTACTCCCACCCCTGCTACTTCACTTCACTCTCACTCTCAAACATTCATTCCAGTAAATGAAATGCTGTGATGTGATTTGCAGAGGAGAAGAGGGAATGGCTTACATGTGTGCAGACAGTGGAAACCTTATGGCCATTGCGCAGCAAGTCATCAAGCAGAAGCAGCAGCAAGAACAGCAGCAGCAGAAACAGCACCAGCAGCACCACCAACATCATCATCATCATCACCATCACCACCATCACCAACACCATCTCAACCCTCTCTCCTTACATCCAATTCCATGGAACAACACTCCCACTCTCGGCTACCCTCTCCATCCCACCGACTTCCCCGACCCCTTCCAACCCGATCCCCCATTCCACTTCCCGGACACGCAATCCGCACCCGCACCGGCCAACTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCTCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCCGATTTCCCCTTCCCCTCCGATCTCAACCGCCTCATCTTCCCCTCCTCCGACACTACCGCCGCCGCTACATCGCTCCCGCTCCAACCAACACCTCCCCCGCCGCCGCAGGAACCAGTCAACGCCGGCCTCTCCTCCGAACCCGAGTCCGCTCACCCGCTCCTCAAAGCCCTAACAGAGTGCGCCTCCCTCGTGGAAAGCGAACCGGATCAGGCCGCGGAATCCCTCGCCCGGCTGAGAAAATCAGTATCCCAGCACGGAAATCCCACTCAGCGAGTGGGCTTTTACTTCTGCGAAGCCCTCTCCCGTAAAATATGGGCCGAGCAGGACAAGGGAGAGCCCAAAAGTGCGAAGACAACCACCTCAGAGGAGTTGACGCTGTCTTACAAAGCCCTCAACGATGCCTGCCCGTACTCCAAGTTCGCACACTTAACCGCCAACCAAGCCATCTTGGAAGCCACCGAAGACGCCTCCAACATACACATCCTGGACTTCGGCATCGTCCAAGGGATTCAGTGGGCCGCGCTCTTGCAGGCTTTCGCCACTCGCTCTTCCGGAAAGCCCAATAAGATCAAAATCTCTGGGATTCCCGCCATCGCTCTTGGGGCCTCGCCCGGCCCATCTCTCTCCGCCACCGGCAACCGCCTCTCCGAGTTCGCGAAGCTCCTCGACCTGAACTTCGAGTTCACGCCTATTCTCACTCCCATTCACGACCTCGACCGCAAGAGCTTTTGCATTGACCCCGACGAGGCCCTGGCGGTGAACTTCATGCTCCAGTTGTACAACCTACTTGACGAGCCCCCGACCGCCGTTGACACCGCCCTCCGGTTGGCGAAATCTCTCAACCCCAAAATCGTTACCCTCGGCGAGTACGAGGCAAGCTTGACACGTGTCGGCTTTGTGAACCGCTTCAAGACCGCGTTCAGGTACTTCTCCGCTGTTTTCGAGTCGCTGGACCCTAACTTGGCCGCGGACTCACCGGAGAGGTTTCAGGTGGAGAGTCTTCTCCTGGGGCGGCGAATCGACGCGGTGATTGGGCCTGGGCCGGTGAGGGAGAGCATGGAGGACAGGGAGCAGTGGAGGGCTCTGATGGAACGTGCTGGGTTTGAGTCTGTGAGTCTGAGTCATTATGCAGTTAGTCAGGCGAAGATACTTCTCTGGAATTACGGTTACAGCTCTCTGTTTTCGCTGCTTGAATCCACGCCGCCTGGCTTCTTAACTCTCGCTTGGAAAGATGTTCCTCTCTTGACTCTCTCCTCGTGGCGCTAATGCTTCTTCTTCTTCTTCCTTTCAAATCAAAATGGGAACCCTTTCCACCTGGTCCTTTTTTCTCTGGTGTGGAACTGCTAATTATTAATTATTTGTCTATATGCCATGGAGGATCCCTCTGCACTGCTGCACATTTTCAATCTCAACTCGCAGACGCGGCGAGAATTCTGCCATTTGGGAGGATTGCCACTTTTAGCAGTTTGGTCCTCTGCTAGTTCCACACCCATTACTTCTTTCGTTTTCAATTGATTTTTTTTTTCCTTTTTAGTAGCTTTTTTTCATCTGGCAATGGTGTTATTAGATTGACTAGGCAAACAGTGACAATGGGAATAGGAAGTTATGGGATGGAGAAATCTTTCTTTCTCATTGCTTCTGGTCATTGTGACTCTGTAAATTGGATTTTGTTGTATGGGTTTAAATTGGTCTGAATGTCAAAGGATTTTATCTTTTTATCTTT