People Important Links Contact Us
Chickpea portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Menu

Genetic Resources

Genomic Resources

Agronomic Practice

Publications

Nutrition

Social Resources
  • Maps
  • Gene Families
  • Gene Search
  • MARKERs  
    • SSRs
    • SNPs
  • JBrowse
  • Download

Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12816 LG3 20623343 20627766 hypothetical protein LR48
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   carboxylic acid metabolic process, carboxylic acid metabolic process, protein phosphorylation, protein phosphorylation, protein phosphorylation, cellular component biogenesis, cell wall organization or biogenesis
Molecular Function   enables   protein kinase activity, protein kinase activity, ATP binding, protein kinase activity, ATP binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_12816.1
MISRESSATVSVSVASVEEFRETKGSPSKGNHFNNAFGLDEWLRTLLYSTPLYHKNVMTHEWIIEREGFVNVNGRSEDLKVMFNGSHNGKPKQLKLEILVCNFNCGWLVPNMERSYVFVFLCVSVLCLFLSEPTRAEDDSQPLLALKSSIDVLHKLPWRQGTDVCTWKGIKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASLLNLRRLYILYLEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFLGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTKLIKIIGGCVGGVVFILLCMVVVWAICRKRKTRVGSGTRSKGGGDVAEGEAGAAGSAGGGGGGGEGGDSAKQGGFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI*


CDS Sequence:
>Vu_12816.1
ATGATTTCACGTGAGAGTTCTGCCACTGTGTCCGTGAGTGTTGCGAGTGTGGAGGAGTTTCGAGAAACCAAGGGCAGCCCCAGCAAAGGCAACCACTTTAACAACGCTTTTGGGTTAGATGAGTGGTTGAGGACTCTACTCTACTCTACTCCACTCTACCACAAGAATGTCATGACACACGAGTGGATCATAGAAAGAGAGGGTTTTGTCAATGTCAATGGTAGATCTGAAGACTTAAAAGTGATGTTCAATGGCTCTCATAATGGGAAACCAAAACAGTTGAAATTGGAAATCCTCGTTTGTAACTTCAACTGTGGTTGGTTGGTCCCTAACATGGAGAGATCCTATGTTTTTGTTTTTCTCTGTGTCTCCGTGCTTTGTCTCTTCCTGTCCGAACCCACCAGAGCAGAAGACGATTCCCAGCCACTACTCGCTCTCAAATCCTCCATTGACGTTCTCCACAAGCTCCCATGGCGGCAAGGAACCGACGTGTGCACCTGGAAAGGGATCAAAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTTCTGGAACACTCCAACCTAACCGGTTCTCTCGATGACAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGCTTCAAAGGAAACTCACTCTCCGGCCAAGTCCCTGACCTCTCCGCCCTGATCAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTCCCCTCCTCGGTCGCGCTGCTCCACCGCGTCAAAGTCATTGTCCTGTCGCAAAATCACATCTCCGGCGACATTCCAGCGTCGCTTCTGAATCTCCGGCGACTCTACATCCTCTACCTGGAAGACAACGCGTTCACGGGAAGCATCCCGCCTTTCAACCAAACCAGCCTCAGGTATTTGAATGTCTCCAACAACCGACTCTCCGGCGAGATTCCGGTGACCGCCGCACTGATCCGGTTCAATGCCTCGTCGTTTTTGGGCAACCCGGGGCTCTGCGGGGAGAACATCCTCCAACCGTGCAAAAACGGCAGCGTTCCGTCGGCGCCGCCGATAAGCCCCAGCTATCCGCTGATCCCGGGAGGCACCGCGGCGGCGTCGAAGCGGACGTCATCGAACCGCACCAAACTGATAAAGATAATTGGAGGGTGCGTTGGTGGCGTTGTTTTCATACTGTTGTGCATGGTTGTGGTGTGGGCGATTTGCAGGAAGCGGAAGACAAGGGTGGGTTCCGGAACGAGGAGCAAGGGCGGTGGTGACGTGGCAGAGGGGGAGGCTGGTGCGGCGGGGAGTGCGGGAGGCGGCGGCGGCGGCGGCGAGGGCGGGGACAGTGCTAAACAAGGGGGTTTTGCGTGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAGGAGGTGATCGCGAGATGAGTTATAGTTTGGAAGATTTGCTGAAAGCGTCCGCGGAGACTTTGGGGAGGGGTATTATCGGAAGTACGTATAAAGCAGTTATGGAATCAGGGTTCATTGTTACTGTTAAGAGGTTGAAGGATGCAAGATACCCTGGTTTGGAAGAATTCAGAGCTCACATTCATGTTCTTGGAAGGCTCACTCACCCTAATCTGGTCCCACTCAGGGCCTATTTTCAGGCTAAAGAAGAACGTCTTCTCGTTTATGATTACTTCCCCAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCCGGTGGGGGAAAACCTCTTCACTGGACATCCTGCCTTAAGATTGCCGAAGATCTAGCAACAGGCCTGCTCTATATCCACCAGAACCCCGGCATGACACATGGAAACCTAAAATCTTCTAATGTGTTGCTTGGTTCTGATTTTGAGTCATGTCTTACTGATTATGGTCTAACTGTTTTCCTAAATCCTGACTCAATGGACGAGCCCAGTGCCACATCTTTATTCTACAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTCCTTGTTCTAGAGCTCTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACGTATGGTTCAGACATACCTAGGTGGGTCCGGTCAGTGCGCGAAGAAGAGACAGAGTCCGGTGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTCTGAACATTGCCATGGCATGTGTTTCACTGGTGCCAGAGAACAGGCCTACAATGAGAGAGGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCGCATGTCTCATCTAACAGTAGTGATCACTCTCCTGGAAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA


Promoter Sequence:
>Vu_12816::LG3:20621343-20623343(+)
TAGTCATTGAATAAATGGAAGAAAAATATTATCAAAACATTCTAATTTATTTATACACTTTATCCTATTAGGTGGAATCCATGTGAATCTTATAAGTGAATTTCCTATAGAATCACTGAGTCACATGAATTTTAGTTAACAAGAAAAGAAGTTTTCATCTGTACAATTTATGCTGCATTTATTTACCATTGGAGAATTAATCATTCAATAATGACATAAGTTAGATATCTCTTACACAATAAATCCTTAGTAACTCATAGTTACTCTAATTTTAAACTATTAAGTAAAAATTAATAAGACTGAACTCCCTAGTTTTCTTTTTTCTCTTATATTAAACATGACCGAAAGCTTTATGGCATGCCTTGTACTTTAAATTTTTCATTGGATTCATCCTTCCAAATTCAAAGATAATAAATTATATTGCGTATTGTTCTTCCCATTGTTCTTTGTTTATTGTCTTACTCTTACATTTAACTTCAAGCAGGTTTTGCTTCCAATCTCAGTCAAATAATAAAAATTCAGCAAAGGTTGGTCCCACATCGTAATTGAAGTCTTTGCACACTCTTAGAACATGCGTTTTGTTAAGGATAACCTTATTTTATCCTCATACTTGAAACATCAGAGAAAACAAGTTTTTCACAACAAAACGCTTACTTCTGATAAATTGACATTCCTATATCAAAACTCAGTTATTTGGAAATACATGTTTTCGAAAGGCAACATTTAATGTTAATTAAATTAATTTTGATGTAAATTATTATTTTTAATCGAGTGGATGAGCTGACAGAGATGTGAAAATCAGTCCCATTTTGTTATTGTTAACTGTGACCACACATTAATGGATTTTGTTACCATGATTTTCGATGACCACTCATAATCAAAGAACCAATATCTCTACCTACGCTTTCGGCTTGGTCTCTGAGAAACTCAAGACAGCCACAAAATCATGGCCTAATGTGTTCATTCTCAGTCTCCATCTTTCCATTTTTTTCTTCCGATTTCTTAATCCAATGACATAATTTTCTGAGCAAACATGTTAATGTACATTGCTTATATACTACATGATATGATGGAGCAGAAGAAAGGATAAGAGATATAACATACAATATGACAGCTGGCAATAGTCAATGATCAGTAATACACGAGCTCAACTGCACCAGTCCACTTTTTTGCTTTGACTCTTCCAGTGGCCATTTAATTGCAACACGTGGCAGGTGTTGGAGTTTTTTTTAACAATTTTCTGATTTCTGCTTTTTGTGAAATTTCATTTATTGTTCTTCTCTTTAGCCTTCAATTCGTTCACCAATTTCCTGAGAGGAAAGAGGGGCCTTTGCCTTTGGGAGAGGAAGAAGGGGAGCATGTTCTTTTCTGTCATCTCTCTCTCTGATCAGACAGAAACAGTCAGACACACGCATAATACACATAGATGAAGTAGGGAAATTCTCACACACACACTCTCTCTCTCTCTCATTATTGCTCCAAACCCATTCAGAGTACAGATGGATCTTCGATCATAGCGGTTTTAGCAGCTGGAATCTGCACTTGCACCATGTGTGTTTCTACTGCCACCACTGTAGTAAATATATTATTATTTTCGACATAGACATTCAATTCCTGTGAAACAGGAAAAAATTGGAGGAAGTGTTCAAACTTTCTCAGCCACCATCATTCCATTCAAATGGGTGCTGCAATTGCAATGATTCTAAAGAGAAGAGTGCTGGATCCCACCTCCGGCAAGCTCTGAGAATGCTAAATTCCACGAGTGTCAGGAACCCAAGAAAGTAAGTATAAAATTACATGCATGGTTGGTTTTGTTTATGCCAGAACGGATCAAATACAAATATAATAGATTAGATTACAGAGATAAAAAAAGAACAGTACTTGTTTTTGTTTGCTTGCAAAGTTGTTCACTTTTGTTTAATAATGTTGCAGCAGTGTAGCAATATATAAATCATAGAGAGAAGAAAAGAATGGTTATTTGTGGTCTGCGGGTACTGGGA


Gene Sequence:
>Vu_12816(+)
ATGATTTCACGTGAGAGTTCTGCCACTGTGTCCGTGAGTGTTGCGAGTGTGGAGGAGTTTCGAGAAACCAAGGGCAGCCCCAGCAAAGGCAACCACTTTAACAACGGTAGGTGTCTCCAATTTGATGGATCCCTTGAGTTTCCAAACAGAGCTCTCTCTTCCATTATTGTTTCCACTGCTATGGTTATTGCTTCATACTTCAAACTTCAATCTCATTTCAAGCTTTTGGGTTAGATGAGTGGTTGAGGACTCTACTCTACTCTACTCCACTCTACCACAAGAATGTCATGACACACGAGTGGATCATAGAAAGAGAGGGTTTTGTCAATGTCAATGGTAGATCTGAAGACTTAAAAGTGAGTGAGTGAAACAGCTAAGAAAACCAAAGATCTGTCTCAACTTCAACCGTTTTTCAGCTGTAATTTATGTACGTCAGTTAACTGTTAACCCTCAAATGCATTAAAGTGTTCAATGGCTCTCATAATGGGAAACCAAAACAGTTGAAATTGGAAATCCTCGTTTGTAACTTCAACTGTGGTTGGTTGGTCCCTAACATGGAGAGATCCTATGTTTTTGTTTTTCTCTGTGTCTCCGTGCTTTGTCTCTTCCTGTCCGAACCCACCAGAGCAGAAGACGATTCCCAGCCACTACTCGCTCTCAAATCCTCCATTGACGTTCTCCACAAGCTCCCATGGCGGCAAGGAACCGACGTGTGCACCTGGAAAGGGATCAAAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTTCTGGAACACTCCAACCTAACCGGTTCTCTCGATGACAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGCTTCAAAGGAAACTCACTCTCCGGCCAAGTCCCTGACCTCTCCGCCCTGATCAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTCCCCTCCTCGGTCGCGCTGCTCCACCGCGTCAAAGTCATTGTCCTGTCGCAAAATCACATCTCCGGCGACATTCCAGCGTCGCTTCTGAATCTCCGGCGACTCTACATCCTCTACCTGGAAGACAACGCGTTCACGGGAAGCATCCCGCCTTTCAACCAAACCAGCCTCAGGTATTTGAATGTCTCCAACAACCGACTCTCCGGCGAGATTCCGGTGACCGCCGCACTGATCCGGTTCAATGCCTCGTCGTTTTTGGGCAACCCGGGGCTCTGCGGGGAGAACATCCTCCAACCGTGCAAAAACGGCAGCGTTCCGTCGGCGCCGCCGATAAGCCCCAGCTATCCGCTGATCCCGGGAGGCACCGCGGCGGCGTCGAAGCGGACGTCATCGAACCGCACCAAACTGATAAAGATAATTGGAGGGTGCGTTGGTGGCGTTGTTTTCATACTGTTGTGCATGGTTGTGGTGTGGGCGATTTGCAGGAAGCGGAAGACAAGGGTGGGTTCCGGAACGAGGAGCAAGGGCGGTGGTGACGTGGCAGAGGGGGAGGCTGGTGCGGCGGGGAGTGCGGGAGGCGGCGGCGGCGGCGGCGAGGGCGGGGACAGTGCTAAACAAGGGGGTTTTGCGTGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAGGAGGTGATCGCGAGATGAGTTATAGTTTGGAAGATTTGCTGAAAGCGTCCGCGGAGACTTTGGGGAGGGGTATTATCGGAAGTACGTATAAAGCAGTTATGGAATCAGGGTTCATTGTTACTGTTAAGAGGTTGAAGGATGCAAGATACCCTGGTTTGGAAGAATTCAGAGCTCACATTCATGTTCTTGGAAGGCTCACTCACCCTAATCTGGTCCCACTCAGGGCCTATTTTCAGGCTAAAGAAGAACGTCTTCTCGTTTATGATTACTTCCCCAATGGCAGCCTCTTCTCCCTTATTCACGGTATCTATCTCCCACTTAACTTCCATTACACTCATTCCTCAATAACCAATGCCACTCATTAATGCATATTTCCACTCTCTAACAATAATCTATTTGTCTCACAGGTGTTTGTATAATTGCTCAATTGAAAATAGTGACATGTCTGTATGATTGGTTTAGTGTTTAGTGTGAATGGCTTATTATTTGAATGATAAAACTATTATTATAAGAATGCAGTTTGCTCCTGAAAAGGGGGGCTGAGAGTGACCTAAAAGATGATTATCTTTTAATAATGGGACCTCCAATTATGCCTTGCACTAAACCTTTCCCTCTCCCTCAGATTTAGTTAAATAAAGACAAAGGTTGCTGCTTTCTCTTTCAAACTGTTTGATGTAATTTCAGACTTTATAAATATGTGTGTGCTCTTAAATTGACAACTCATTTATAGCGTGACCCCCATGTTAGTGTTGTCGCCCTCCACCATGGAAAGATTACTACACAGCTATACAGAGTGGAGTTCGTGTTTTACTGTACTGCCATGTACTTCTACAGTGATCTCAAATCCACTTTAATCGGTGTCAAGTATTTTTTTCTATAGGAATTGCTCGGTGTTAAATTAGGTCATACAGATTTTTAAATCTCATAATTCATTTGTAAATTCTCTCCCTTTCTTCCAGAGTCTATCTATCAGGTCAACACTTTCTGCTCTCACCTACCAGCGGGATTCGTAGATTGGAGAAAGTGGTTAGAACGTTCCCATGTTCTGTTCTTTTTAAGATTGTTTTGTTTTTAAAATAAAATAACACAGTTGAATTCCTTTCGTTATGATAGCTGAAATATGCATTTCAGTAATAAGGATTTAGGTTACCCGTCGATCTTGAGCATGGCAAATTAGATCTTTTTGTTTTGGAATTGCCCCTTAAAGAATTTAGGAGCCAGCATTAATCCCCTTTCTAGAAGCCCTAATCCTTTTTATGGGAATTCTATTCAAATACGAAGGAAGATGCTGGATAAACAACAGTGTTTGCAACTGTTTAAACTATAAAAGCGGTTACATTATTCTGTGGATATATGAAGATAAGTTTTATCTTCACTTGATGATGTAAAAAGTTGAGCATTTGTGAGAAAAAGTTTAAGCTTTATTATTCCTAGGGAACAACCCCAATTTCAATTATATAAGAATAAGATAATATGCTTTCTTGCAGAGCATTTAACTAATCAAGAAGTCAGCCTTTCTTTATTGTGGAACCATAGTATCCGAGGGTAGAAAGTAGTCAATCATTCCAAGTTGTCATTTTTCCTGGATCCTCACGTGTATTTCTGCTGTCTTGAAACTATTGTTTTTCTCATCACATGCATTGTGCTGCTTTATTTTCTAAGCAAATCGTTGTGAACCTTAGTCTTCAAGCAATTACAGTGTTCCATCACTGACTTGTGTCTTGGTAATACAAAATTTACATGGTGATAATACTTGCATGAATGTAAAGTAAAGTAAATGGCACAAATGGAGAATCCAAGTGATAATACCAATAAAGTGATGTTATCTTTGAGCTAGCCTCTAGTTATTGAAATTATGCTAGTAAGACTGGCATATATGTTGGATTTAGCTATACTTTATCACCATCGTCATTTTGTTTAAGTGATCTTTCCTAGATATGATTGAAGTTGTTTGTATTTGTTAATTGAGCCTTTTAGAGTTGTCAGAATTTTAAACCAGTAACATTCTAGTGGCATCACATTTCACTGTGCATGGAATTAAAGAACACCACTTATACAATTTCCAAATGCTAAGAACTAAACTGAAACTTTCTGCATATTAACATCACTATCAAACCAATGATTGACAGAAGAGCTGTTGCGATGACTATAATGCAGGATCAAAAACATCCGGTGGGGGAAAACCTCTTCACTGGACATCCTGCCTTAAGATTGCCGAAGATCTAGCAACAGGCCTGCTCTATATCCACCAGAACCCCGGCATGACACATGGAAACCTAAAATCTTCTAATGTGTTGCTTGGTTCTGATTTTGAGTCATGTCTTACTGATTATGGTCTAACTGTTTTCCTAAATCCTGACTCAATGGACGAGCCCAGTGCCACATCTTTATTCTACAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTCCTTGTTCTAGAGCTCTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACGTATGGTTCAGACATACCTAGGTGGGTCCGGTCAGTGCGCGAAGAAGAGACAGAGTCCGGTGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTCTGAACATTGCCATGGCATGTGTTTCACTGGTGCCAGAGAACAGGCCTACAATGAGAGAGGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCGCATGTCTCATCTAACAGTAGTGATCACTCTCCTGGAAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA

NIPGR © 2020

This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

Visits: 1322356