Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12608 LG3 18698045 18699139 PREDICTED: DNA-damage-repair/toleration protein DRT100
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 18698075 stop_gained p.Cys355*
C/T 18698076 missense_variant p.Cys355Tyr
G/T 18698117 synonymous_variant p.Ser341Ser
A/G 18698267 synonymous_variant p.Pro291Pro
G/A,* 18698492 synonymous_variant p.Thr216Thr
T/G 18698538 missense_variant p.Gln201Pro
G/T 18698993 synonymous_variant p.Ser49Ser
C/T 18699107 synonymous_variant p.Leu11Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12608.1
MAGIWFTPLTLLLLLAFSSAVRSCSPSDLAALLHFKSALHESRNGIFNSWTGTDCCGNWLGVSCDRDSRRVAEISLRAGPVYTTFEKPYRPDYMSGYISPEICKLTHLSTLIISDWQGISGEIPRCISSLSFLRIIDLTGNRISGTLPADIGKLRYLSLLSAADNLITGEIPATLTSLTGLTHLDLRNNKISGPIPQNMGQLQMLSRAFLSGNQITGSIPGSICHIYRLVDLDLSNNHLSGPIPESLGRMSVLSTLKLDNNRLSGSIPGRLLASGINELNLSHNMLEGIIPDAFGASCYFTLLDLSYNNLKGPIPKSMSSASYVGYVDFSHNHLCGPIPNSYGNTDASSFAYNDCLCGKPLKAC*


CDS Sequence:
>Vu_12608.1
ATGGCTGGAATCTGGTTCACGCCGCTAACGCTGCTGTTACTACTCGCATTTTCCTCCGCAGTTCGCTCGTGTTCGCCGTCGGACCTGGCCGCGCTGCTACACTTCAAATCCGCTCTCCATGAATCTCGCAACGGAATATTCAACTCCTGGACCGGCACCGACTGCTGCGGCAACTGGCTCGGCGTCTCCTGCGACCGCGACTCTCGCCGCGTCGCCGAAATCAGCCTCCGCGCCGGTCCAGTCTACACCACGTTCGAGAAGCCTTACCGTCCGGATTACATGTCCGGTTACATATCGCCGGAGATTTGCAAGCTCACTCACCTCTCCACCCTCATCATCAGCGACTGGCAGGGAATCTCCGGCGAGATCCCGCGCTGCATCTCCTCGCTCTCCTTCCTCCGCATCATCGACCTCACCGGAAACCGCATTTCTGGCACTCTCCCAGCAGACATCGGGAAGCTTCGGTATCTGAGCCTCCTAAGCGCCGCCGATAACCTAATCACCGGCGAAATCCCGGCGACGTTGACGAGCTTGACTGGTTTGACGCATCTGGACCTTCGTAACAACAAGATCAGCGGGCCCATTCCGCAGAACATGGGCCAGCTTCAGATGTTGAGTCGGGCCTTTTTAAGCGGAAACCAAATAACCGGGTCAATCCCGGGCTCAATCTGTCATATATACCGTCTGGTGGATCTTGATCTGTCAAATAACCATTTATCCGGGCCGATTCCTGAAAGTTTGGGCCGGATGTCGGTTCTGTCAACGTTGAAGTTGGATAATAACAGGCTTTCGGGAAGCATACCAGGGAGGCTGTTGGCGTCGGGTATTAACGAGCTGAACTTGAGCCACAACATGTTAGAGGGTATCATACCTGACGCCTTTGGGGCTTCATGCTATTTCACGTTACTGGACTTATCGTATAATAACCTCAAAGGGCCAATACCGAAATCTATGTCTTCTGCTTCGTACGTTGGGTATGTGGACTTTAGCCATAACCACCTCTGCGGCCCAATTCCTAACTCCTACGGTAACACCGATGCCTCCTCATTCGCTTACAACGATTGCCTCTGTGGAAAGCCACTCAAAGCTTGTTAA


Promoter Sequence:
>Vu_12608::LG3:18699139-18701139(-)
CCCATTTGTCAAATCAACATAAACACAACCAAGAAATTCAACTAGGTAGCATCGAAAATAAACCAAAATGAGCATATTAAACTTATCATATGACTCAATCATGCAAATAACAAATCTCAAGATATCTATAATTTAAAAGCGATGAAATTGATTTTCCTTACTTGACCAATAGCTCATAAGATCATAACTAGCCAAACTCTTTCTAACTTGCACATACTCTATCTACACATAAAAACATAACAAGGATGATCATGATATACTATTATGATCATTGATCAACATAGACTCAGAAAGATGACTAAAAGGATTATGCAAGTGAAAAAAAGCTCACATACAACAAATAGCATAAAAGATCAATAAAATATAAAAATAGAGAAACTAATAAATCCAAATTGAAAAGTTCATATCAAAGTTCAATCCTACAATCTCGATTTAATCAGACAAATAGAAAGAAAGAACCATTAGAAAGAAGTTAGAGAATTAAAAAAAATAGTTTATTGAAACGATGTGTTTTAAAATAATGAAATTTGTTCATAATAAAACTATTTATATTAAAATAATCGAGTCTCAAACCACTTGAAATGTCATTTTTTTAGATTTTTACACATAAAATAGAAAAAAAATGTTATATATATGAATACAATATTTATATTGTGATTCATTATTTAAAGATATAATTGATTGTAACAAATTTCTTTTGTATCTGTTCATTAACACACTATTTTTGTTTTATATTATTTTTATTTTAATTGCTCTTCTTTCTCTTATTTTTGCATTTTCCCTTGCTTTTCCTTGTGAGAAAAGGCTCAATTTGGTTGTTTTGTTTGGATTTAACGTTTTAGCTATTGCACATTCATTTGTGTGATGAGTAGGGCTAGTCTTTTTGAATTCTGATTGTGACTCCAAAAGTACAGAAAATGAGCAAATCCTGTTACTAGGAACGTTAGTACAAATTAATTTTCCTTTAAACAGGGATCCATTGCTATAGGGTTTTGGAAGTTTCCTACTTCTTTCAGTAATCAAACACGTTGACCAAAATATTGGCTTAAGTGGTAGTCTAAGTGTTTACTAAATTTTATGTCATCCTAAAATGTCAACTTGCGTTCCCATTTTCATCATTTATTCATTATCATTAATGTTATTTAAATAACACTGAAATAGAATCTCCAGACAAGGTCTTACACAAAATTTATAGTCTATACGTGATGATCCGAGTTTTCCTCAATGATACAAAACAAGAGAAAAAGCTAATGGAACAAATTGTACTACATATATGTATATACCGACACGTCTTTGTAGACTGAATTCAAAGTTATTGTTTTTCATTAAGTTGGCTTAAGATAGTCTGTAAGTAACAACTGGTAATTTGATTTTCTACAAACACCACTATTAAATAAATAGTTTCAGTGTCTTTTAAAGGAGGTAGCAAAATTTATATCTTATTTTTTTAAATGTGGTACTTAGAAGAGTTCATATTTTTACTAAATTTTTTGGTATTGTCTTTTGATATTTTAATATTTTTTAATATTTTAAAATATGAAAATCAATATTATAGATATATTTTGAATTTACAGCGGAATAGGGATACGACAGAAAAATTCAATAGAAAATCTAAATTTTACTCAGACACGTCCCTTGTGTTTAGCATGCTCAGCCATTATTAAGAAAACAAATTAAGTTGACTATGCCAAAGGGTTTTGATTCAATTATTGAAATTTTTGCTGAGAAAAATGAAGTTGACTAAGGCGAAGAGTGCAGGAGCACGAGCAGGATTTCCCTATTCAATTATTAAATTCTGCTGATGAGCAGTGTAGCAGCATTCTTTTATTTTGTAATTAGAACTTGGAATAAATAAAAAGTTTTAAGAAAGGAACAGGATGGCGAGATTCAGTAAACAGATCAAGTTGACATTATAAATACCCATGTCAGGTCGATAACTCTCATGCATGCAGGCATCGCGCATCTCTGAACTTTCTCTTTCCCTCTCTTCCTAAACCACA


Gene Sequence:
>Vu_12608(-)
ATGGCTGGAATCTGGTTCACGCCGCTAACGCTGCTGTTACTACTCGCATTTTCCTCCGCAGTTCGCTCGTGTTCGCCGTCGGACCTGGCCGCGCTGCTACACTTCAAATCCGCTCTCCATGAATCTCGCAACGGAATATTCAACTCCTGGACCGGCACCGACTGCTGCGGCAACTGGCTCGGCGTCTCCTGCGACCGCGACTCTCGCCGCGTCGCCGAAATCAGCCTCCGCGCCGGTCCAGTCTACACCACGTTCGAGAAGCCTTACCGTCCGGATTACATGTCCGGTTACATATCGCCGGAGATTTGCAAGCTCACTCACCTCTCCACCCTCATCATCAGCGACTGGCAGGGAATCTCCGGCGAGATCCCGCGCTGCATCTCCTCGCTCTCCTTCCTCCGCATCATCGACCTCACCGGAAACCGCATTTCTGGCACTCTCCCAGCAGACATCGGGAAGCTTCGGTATCTGAGCCTCCTAAGCGCCGCCGATAACCTAATCACCGGCGAAATCCCGGCGACGTTGACGAGCTTGACTGGTTTGACGCATCTGGACCTTCGTAACAACAAGATCAGCGGGCCCATTCCGCAGAACATGGGCCAGCTTCAGATGTTGAGTCGGGCCTTTTTAAGCGGAAACCAAATAACCGGGTCAATCCCGGGCTCAATCTGTCATATATACCGTCTGGTGGATCTTGATCTGTCAAATAACCATTTATCCGGGCCGATTCCTGAAAGTTTGGGCCGGATGTCGGTTCTGTCAACGTTGAAGTTGGATAATAACAGGCTTTCGGGAAGCATACCAGGGAGGCTGTTGGCGTCGGGTATTAACGAGCTGAACTTGAGCCACAACATGTTAGAGGGTATCATACCTGACGCCTTTGGGGCTTCATGCTATTTCACGTTACTGGACTTATCGTATAATAACCTCAAAGGGCCAATACCGAAATCTATGTCTTCTGCTTCGTACGTTGGGTATGTGGACTTTAGCCATAACCACCTCTGCGGCCCAATTCCTAACTCCTACGGTAACACCGATGCCTCCTCATTCGCTTACAACGATTGCCTCTGTGGAAAGCCACTCAAAGCTTGTTAA