Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12535 LG3 17901485 17903829 PREDICTED: probable receptor-like protein kinase At5g47070
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to organonitrogen compound, protein phosphorylation, protein phosphorylation, response to fungus, defense response to bacterium, cellular response to organonitrogen compound, cellular response to organonitrogen compound, phosphorylation, immune system process, regulation of defense response, response to fungus, signal transduction, protein phosphorylation, cellular response to salicylic acid stimulus, defense response to bacterium, cellular response to salicylic acid stimulus, protein phosphorylation, defense response to bacterium, protein phosphorylation, protein phosphorylation, phosphorylation
Cellular Component   located in   peroxisome, nucleus, cytoplasm
Molecular Function   enables   protein kinase activity, ATP binding, protein kinase activity, protein kinase activity, protein kinase activity, ATP binding, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
A/T 17901965 missense_variant p.Phe276Leu
T/A 17902016 synonymous_variant p.Pro259Pro
G/A 17902201 intron_variant
G/C 17902270 intron_variant
A/G 17902555 intron_variant
A/T 17902558 intron_variant
A/G 17902560 intron_variant
T/A 17903321 missense_variant p.Glu170Val
G/A 17903406 missense_variant p.Arg142Trp
C/T 17903785 synonymous_variant p.Val15Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12535.1
MKCFYFSNAEDEDCVAAAPSSRGSTSRVSWARSLSLMDTRSRSNFDSDSTEFSDTVDFHHFLVQRRANDLRIFPFSALKFATRGFNRALLVGEGGFGSVYRGVVEEKEVAIKQLNRNGQQGHKEWINEVNLLGVVKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEEHLLARVPSTVLPWGTRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDENFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKNEQKLLEWVRSYVSDPRKFHHIVDPRLKGQYCIKSAHKLAILANKCLTKQPKSRPKMSEVVESLGIIIIETDTRDEGFPQAAVTAREEKEVEETEPEPAKQGNNYLKKVFEFKDMVSLRNKSIGRLDWKSWAPGLVRSW*


CDS Sequence:
>Vu_12535.1
ATGAAGTGCTTCTACTTCTCCAACGCAGAGGACGAAGATTGCGTGGCAGCGGCACCGAGTTCGCGCGGTTCCACTTCGCGTGTGTCGTGGGCGCGTTCGCTCAGTCTCATGGACACGCGCAGCCGCTCCAACTTCGACTCCGACTCCACGGAATTCTCCGATACGGTGGACTTCCATCACTTCCTGGTGCAGCGCCGGGCCAACGACCTCCGCATCTTCCCATTCTCAGCGCTGAAGTTTGCCACGCGCGGGTTCAACCGCGCCCTCCTAGTTGGCGAGGGGGGGTTTGGGTCCGTGTACCGCGGCGTGGTGGAGGAAAAGGAGGTGGCGATCAAGCAGCTGAACCGCAACGGGCAGCAGGGGCACAAGGAGTGGATCAACGAGGTGAATTTGTTGGGAGTGGTGAAGCATCCTAATCTGGTGCGGTTGGTAGGGTACTGCGCTGAGGACGATGAAAGAGGGATCCAGAGGCTTCTGGTTTATGAGTTTATGCCGAATAAGAGCTTGGAGGAGCATCTCTTGGCACGAGTCCCTTCCACGGTTCTGCCTTGGGGGACCAGGTTGAGGATTGCGCAAGATGCGGCTCGCGGTTTGGCTTATCTTCACGAAGAAATGGATTTTCAGCTAATATTTCGGGATTTTAAGACGTCCAACATCCTGCTGGATGAAAACTTCAATGCAAAGCTTTCTGATTTTGGACTGGCTAGGCAAGGACCTTCAGAAGGGTCCGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTAACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTACGAGCTTATCACTGGGAGGAGAGCTGTAGAGAGAAACCTACCTAAAAATGAACAGAAGCTTTTAGAGTGGGTTAGATCTTATGTTTCTGATCCTAGGAAGTTCCATCATATTGTAGACCCTCGACTTAAGGGGCAATACTGCATCAAATCAGCCCATAAACTTGCAATCCTGGCAAACAAATGCCTCACAAAACAGCCGAAGTCTCGCCCAAAAATGAGTGAGGTGGTTGAGTCTCTTGGAATCATTATTATTGAGACAGATACTCGGGATGAAGGGTTTCCCCAAGCTGCTGTAACCGCTAGAGAAGAAAAAGAAGTAGAGGAAACTGAACCTGAACCAGCGAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTCAAAGACATGGTCAGCTTAAGAAACAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGGCTAGTAAGAAGCTGGTGA


Promoter Sequence:
>Vu_12535::LG3:17903829-17905829(-)
TCCCATGGCGGCTTATACTTTTATATTACTCTCAGACTGTGAGTATTGCACTTTTCTACTTTGAAAAGTCAATACATTAATTCTATAATACTTGTTTGATAACTTGAGTTTTTTTTTTCTTCACTTTTAAAACAACCTTTTAAGTTATTTTTTAAGAATAAAATATTCAGAATAGTAGAAGTGGTAGTAGTTTTCGCATTTGAAGAAATAATGACACCATTTGAAGGACTTAATAGATAAGAGAAGACTGCGTCAAGAAAAAGCAAAATTTCTCAGCACACTTTAGTTTCAAATGGGCCCCACCACAATGGTGTCCGCTGAATGCGATGATGAATTCTGATCCGATGGCTCTCGAGTCGCCCACCAACGACAGCAGCCACAACGCATCAACGGTCACCACAAAATTCGGACTCTCGTGTTCCATGTTCCGAAACATGACTATCATAGCAGAAAAAACATAATATTTTTTTACAGGACATATATATTTTAAAACAATTATAATAAAATAGCAATACATTATAATTTATGAGTAAATAAGTATCTAAAATTATTTTAAGTTGCTGTAGCTGATAGTATACTTTCTTAAAAACAATTTTTTATTGAAAAAATTCTCACGATTGTTGTAACTTTATAACGAGAAGATTTTCTCATATAAATACTCCAACTTTATGATTTTTTTATTTATTTTAGTTTCGATATGTAATATTTATTATTACAAATGATGAATTTATTCCAATTACCTACTAAAAGAAATGATGAATTTAAATATTAAAGCAACATGTGTACAATGTAATTTAAAATTGACTATATATTAAAGTAATGTTAAAGACTTGGATTCTTAGTCCACAAGGAATCAAAGAAAACAAACAAAAATAAAGACACTTTCTCTTATAATATATACTTTCCCTTTTGTTATAGTTTCATTTTCTTTGTCATTCCACCACAAATAATCTCTTTCTCATTTTAGTGTTCGTCACTATAAATTTTCACTGCACATTTATTATTATCTTATTGAATAAATAAATAATGAATCTATGAAAAACAATATTTTTCAAAAAATGTGAATAGCATAATTGGGTCCTATATAATTTATTCCATCACTCATATATGATAAAGATAATAACACAGAATTTGTTTACCTAAAACGCATCGTTTTCTTTAAAAGACACATTACGTGACATTTTCCGCAATGTTAGATGTACAAAGCTTTTATTATTTTTCAATATAAATATTATTCTTTGAATAAAGTAATTTGACTCGTCCAACAATATGTATAATGTCACAAGTTCAGGCAGGTTAAAGAAAAAACATTTTTATTGGTTTTGTTAGTTACATTACTTTGCATAAATTGTCGTTTTAAGGTTTTCTTTTTACCGAAATCAAGACAATCATTTTATTTTTTTATTTTATTTTCAAACAATTTTAAAAATCACAAATAAAACAGATAACAAAAGGTAAGTGTGAGAGTATTCTTCTTTTAAAATTTTGTATACTTTCTTTTTTAGTAAAGTATTTCTTTTTAGCTATATTATTTTCATTGATTAAGCTGGAGATCTTTAAATAATCTAAATCCAACTTTAGTTGGACTATAATTACATTTCATTCGGTTTAAATATATTTTAGGTATTTATTATTTCAACATAATTGAAAGTTTCAGTTTCCTCTTTTAAAACGCCTCGGTTACACGTGAATTGAATATTTTGTCAGTTTTTTTTAAAGTAATACATTAAATATGACAATGTAATAAATAAATATATTTAATGTTGCATTTGTCACGGCTTTTTACATGATGCAATTAGCATAATAAATTAAGTAAATTTTATGAGAAATAATTAAACATTGTATCACAGAGAGAGAGAGAAAAAAAAAACATTTTATTATTATTGTTCGTTTTCTTCGTCTTTGTCTTCTTGATTCTGAGTCTGAAAACAATGAAACGTTGAAAGGGAGGAGAGTGCGAAATTTGGAATGTTTTTGGGTTTGTTCATTGATTTCCGCAA


Gene Sequence:
>Vu_12535(-)
ATGAAGTGCTTCTACTTCTCCAACGCAGAGGACGAAGATTGCGTGGCAGCGGCACCGAGTTCGCGCGGTTCCACTTCGCGTGTGTCGTGGGCGCGTTCGCTCAGTCTCATGGACACGCGCAGCCGCTCCAACTTCGACTCCGACTCCACGGAATTCTCCGATACGGTGGACTTCCATCACTTCCTGGTGCAGCGCCGGGCCAACGACCTCCGCATCTTCCCATTCTCAGCGCTGAAGTTTGCCACGCGCGGGTTCAACCGCGCCCTCCTAGTTGGCGAGGGGGGGTTTGGGTCCGTGTACCGCGGCGTGGTGGAGGAAAAGGAGGTGGCGATCAAGCAGCTGAACCGCAACGGGCAGCAGGGGCACAAGGAGTGGATCAACGAGGTGAATTTGTTGGGAGTGGTGAAGCATCCTAATCTGGTGCGGTTGGTAGGGTACTGCGCTGAGGACGATGAAAGAGGGATCCAGAGGCTTCTGGTTTATGAGTTTATGCCGAATAAGAGCTTGGAGGAGCATCTCTTGGCACGAGTCCCTTCCACGGTTCTGCCTTGGGGGACCAGGTTGAGGATTGCGCAAGATGCGGCTCGCGGTTTGGCTTATCTTCACGAAGAAATGGATTTTCAGGTACTCTATTTGTGATGGATTGTGACTTTGCCTTGTCGTGTCGTCATTTATGTGATTTTCTTTCAAAACAAACATGTGGGTCTTTGTGGTTAAATTGAAAAGAAATGGGTACTTGTTGTTGGACTGTGTTTATTTATTTTACGAATTCATTAGTGATATATATCATATATGTGGCGGATGGATGGATATCTTTTATGGAATAGGATACTTGTTAGAGAATTTTTGTCATGGGTTGCTGAAGTGAATGGTTGTTGCTTCATAACAATGGGTTTAGTTTTGGTGTGGAATCAAGTTTGAGAGATGAGGATTGTTTGGATTGAAAGTAAAGGAGAATGTAACATGAAGGCAATTAGGATTATTAGGTGGGCAGATTTGTATACGGGTGTACCAAATATACAAGCACACTGAGTAGGAAATCGTTGATCTGGATTCGTGCAACCATTGGCTTTTTAAGTGTCTTTCATATGAATTTTTTGTTAGTAAAGCAAATGCTGAGAGTTGATTTGTTTTTTCTTTTGTTTAGGACTTATGGTGAAGTAGAAATATAAAAGAGTTGTGAAGATTGAAAATTTTTGTGACTTAGATCTCTTCGGCTTTTTTTAGGATTAATAGTGGTTTACAAGCATGACTTAATTTTTTTTTATATATATTTGTGGATAATTTCTAATGTGGATAAATATCTTTTACAGCATTTCACATCTGCTAAAAACCATAAAGAATTTTTGTTGAAACTCACTATTGATGATTGCCACTATTACTGGTGCAGCTAATATTTCGGGATTTTAAGACGTCCAACATCCTGCTGGATGAAAACTTCAATGCAAAGCTTTCTGATTTTGGACTGGCTAGGCAAGGACCTTCAGAAGGGTCCGGCTATGTTTCAACAGCAGTAAGAATTTGTCTGTACTCTAGCGAAAATTCATTATATTCTACAACTATACATAATATTGTTTGGAAATTAAAACATTTGCATTATAAAATCAGATCAACGTGTCTTCTGGCTGCTTATTTTAAGCAAATTATACTATATTTTACCATTCTTCAATGTGAACAAGTCCAATTTATGAAAAGCCACAATGATGATCTGAAGTCTGAGTCTTTGTTTTTGATCATGATATTTTTGCTGCTATGCAAAATAAATGACTTGTTTCTTTGCAAAGGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTAACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTACGAGCTTATCACTGGGAGGAGAGCTGTAGAGAGAAACCTACCTAAAAATGAACAGAAGCTTTTAGAGTGGGTTAGATCTTATGTTTCTGATCCTAGGAAGTTCCATCATATTGTAGACCCTCGACTTAAGGGGCAATACTGCATCAAATCAGCCCATAAACTTGCAATCCTGGCAAACAAATGCCTCACAAAACAGCCGAAGTCTCGCCCAAAAATGAGTGAGGTGGTTGAGTCTCTTGGAATCATTATTATTGAGACAGATACTCGGGATGAAGGGTTTCCCCAAGCTGCTGTAACCGCTAGAGAAGAAAAAGAAGTAGAGGAAACTGAACCTGAACCAGCGAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTCAAAGACATGGTCAGCTTAAGAAACAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGGCTAGTAAGAAGCTGGTGA