Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12525 LG3 17790869 17792252 PREDICTED: WUSCHEL-related homeobox 2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 17791111 missense_variant p.Lys81Asn
C/T 17791414 intron_variant
T/A 17791641 intron_variant
T/A 17791812 intron_variant
T/A 17791822 intron_variant
C/T 17791830 intron_variant
G/A 17791833 intron_variant
G/T 17791834 intron_variant
G/T 17792038 missense_variant p.Glu167Asp
T/C 17792183 stop_lost p.Ter216Argext*?
A/G 17792186 missense_variant p.Lys217Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12525.1
MEESGNEELEMGGSNGVAASSRWNPTKEQITMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQDTIAYFNRFLHTPQPFFSPPICPNGLCPPYCIPQVQSENGFYPPHPKVLVPVGFRRRPSEIFVPTDMSNVISNGPLLYEGMQQRISDCNLSYSNQETLDLFPLHPTGILEGKTTYQVSSLASVSADSSTDINENDPSPLNKPFFDFFTTSGQGS*


CDS Sequence:
>Vu_12525.1
ATGGAGGAGAGTGGAAACGAAGAGTTGGAGATGGGAGGGTCTAATGGTGTTGCAGCCAGTTCACGGTGGAACCCTACAAAAGAGCAAATAACCATGCTAGAGAACCTGTATAAGCAGGGAATAAAGACTCCCAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCTAGGCAGCGACAGAAGCAGAAGCAAGACACCATCGCTTACTTCAATCGCTTTCTTCATACTCCTCAGCCCTTTTTTTCTCCGCCAATTTGCCCAAACGGCCTGTGTCCTCCGTATTGCATACCTCAGGTGCAGAGTGAAAATGGGTTTTATCCCCCACATCCAAAGGTGCTTGTACCAGTAGGTTTTAGGAGAAGACCATCTGAGATATTTGTGCCCACAGACATGTCAAACGTTATCAGCAACGGTCCGCTGTTATACGAAGGAATGCAACAGAGAATCTCGGATTGCAACTTGAGCTACAGTAACCAAGAAACGTTGGATCTTTTTCCTCTGCACCCAACTGGTATTTTGGAAGGGAAAACAACATACCAGGTGTCTTCTCTGGCTTCAGTTTCTGCTGATAGTTCCACTGATATCAATGAAAATGATCCTTCCCCTCTTAACAAACCCTTCTTTGATTTTTTTACTACTTCTGGACAAGGTTCTTAG


Promoter Sequence:
>Vu_12525::LG3:17788869-17790869(+)
TTCGCCTTTTGAGATTATAGAACGATTCCGTTCCATGGTAGTATAATTATTTAAAACCATAGAGATGGTTTGAGAATAGCATAAGGAAATAGTAGAAACATGTCTAAACAAAAAGTACGAGAAATACTGGTGTTAAAATATTCCAAATCTAACTTTTCGTCATCAACTTCAATAAATAAAAAAAATACTACTGATCCCAGAACTTTGACAAGACCCGTTTTCTCTTTTCTGTTGATTTTGACATACGGGTAATATATCGATTCCTAAACGTGGATATTTCTTTGGCACCTAAAAGAAAAATGTAGTGTAATCCATCTTCTGACACTCCGTTTCTCTATGCAGTATACTTTTAATCCAGTGAAATTTACGTGCATTCAACTTAATTGCGTTTCCAGATTACGAAAATCAGTGAGAGAAAATATCTAAAACAATGCTCAAAAAAGGAGAGTGTATTAGTTTTTCTTATAAGCAAAAATGTGGTGTTATAAAAGAAGCCTGGCTTACTTACTAACTTGTAATAATTTGCACACAAAATAACCCTTTTTTTGAAACTGTCTCATTTATATCCGCTTCTTCGTGTGTATGCCTTTGGATTTGAATTCGCCAGTTGTTTCACTTTCTTTTTCAAAGGTTGAGAAAAGGCTATATATACATGTTGACAAGCCAGAAGGTTTATACCACCCACTTGCTGTTTCTTTTTGCACTGGTTTCGGTTATTCTCCACGCTGTACGAGTACTTTGAATTTTACAAAAACTGGTTCTATTTCCCCACGTATAAAGCAGTAATCCAAATTGTATTTGATGCGTTTTTCAATCGGTTTTTCGGGAAAAAAGAACTGTGGTGCTGGAAAGCAATACTGTGCCCACAGTAATTACGTTGAATGCGTTGTTACAGTGAAATGAAATGAATTAACAGCTAATGAAGCACTGTTACTCCTAGCTGGTACATGCAACATGACAAAGAACTGGTCAGGCCAGAACTGTTTTTCCTTAGAACCCAACGCAAAGTAATATTTAACTGCTATGTATCCCATACGTTAGTCCTATGCATGAGATTTTTTTGGTCATAATGATAATCATAATGATGCCAATTGCATGACACTTTGGAGAAAAAGAAAAGAATGTAGATGAAAATGGACCACAACTGCTGGGGCATGTTAGGAATTGAAATGAAGAAGGGTGGTCCAATCGGGCGACTTTAGCAGACAAAAAAAGGCATGAGAACATACAGTGGGAAACGATGGTTTTAGAATAATGGTAATAAATTAAGAAGATATGAAGTTCACAGTCACCTTCAAACTCGTTTTGAGTGAGGCTAGATAGGTAGACGTTTCAACCTCATTCATTCATTCATTAATCTCTTTCCTCTGAGCCTATCTGCTCTCACTTCAATTCCCAAAGCCTAGCCTTAACCTACACCTTACAACCCAACCGGCTGTCTTTTTCCTTCAATGACTTTTATGCCCTTCCTTTCCTTCAATGGCGTAACCTACGTTCTTCTCTCTCTTTCTCTCTATCTATCTGTCATTCCCGAGATACAAGACATTATGGGCTTAGGAAAGAGAGAGAGGTAGTGGTAGAAATCAACGTTAATCTTAAACAGCGTCGTTAAATCTACTATGTATGCACCAAAATCAATGGCACGAAGGGGGGGCCATTTGGGCAATTATTGTCTTCTCGTAAAAATTCTACACGTCTTGGAACGAAGACGACGAAACCTAAGCCTCTCTCTGTGCCGCTAACCGCCATGTTTTCAGAGATGTTCTGCACCAAAAACAATACGCATGTTAATCCTCTCTCTCAATTCTCAACCATTTTGTTTCTCCCTACCTACTCTATAAAAAGAGTACCTCCTTCACCACCCATGAGAATAAGAGCACTGTCTGGTGTAGTATACTAATAATCAAATAAAAAACAACCCTTTAATTGCCTCCTCCTACTATAATACTACTACCCAAACCCCCATTACCATTGATTTAATAGAGAGAAACAAGTTAAGA


Gene Sequence:
>Vu_12525(+)
ATGGAGGAGAGTGGAAACGAAGAGTTGGAGATGGGAGGGTCTAATGGTGTTGCAGCCAGTTCACGGTGGAACCCTACAAAAGAGCAAATAACCATGCTAGAGAACCTGTATAAGCAGGGAATAAAGACTCCCAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCTAGGCAGCGACAGAAGCAGAAGCAAGACACCATCGCTTACTTCAATCGCTTTCTTCATACTCCTCAGCCCTTTTTTTCTCCGCCAATTTGCCCAAACGGTTCGTTCATTCATTCATTCCTTTCTCATCATTCATCATTCATCATTCATCATTCTATTCAATCAATCATTTAAACTGTACAATTTTTCATCTTTATATCTTCACTCTTCTTTCTTGCCTTCTGCTTTTGATTGATTAACTACTGTTTGATTGTTATGTCACCAATTCGTCTCTTCATGCAAATGTGCTTGCAATTGGTATATGTGTTAATTAAATAAAGCAATAATAACAATAGTTATTCTCTTTTTAATTTTCTCTGTAGAAGATTATCATGTGTGTTCTTCAAATTCTTCTAACCAAGTTATCTCTCTCTACATTTAAACCTGAGATCGAAATAACTCGTATCAACTGAGATCTACATACTGCGGTTCTTTTAACAGTATTTATTTCTTCACAAGTAACTGAAATCATCTTAAAAGTCACTGTCTCCACTTTTATGTAGCCAAATCATGATAGAAGGACAGCTGTTTCTTTTGCTTTCTGTTTTTTTCTTTTGTTTTCTTCCAAAAGCCTTTTTTTCACATCTCTCTCTCACACACAATGTATCTATATATCTATATATATAGTACATCTTTTTCAAAATTCAAACTGTTACATCTCTTTCTCATTAGTCACATATTAATTATATTATATAACCTTGGTAGTTGAGGGTGTTTTTGGTTTTCAGGCCTGTGTCCTCCGTATTGCATACCTCAGGTGCAGAGTGAAAATGGGTTTTATCCCCCACATCCAAAGGTGCTTGTACCAGTAGGTTTTAGGAGAAGACCATCTGAGATATTTGTGCCCACAGACATGTCAAACGTTATCAGCAACGGTCCGCTGTTATACGAAGGAATGCAACAGAGAATCTCGGATTGCAACTTGAGCTACAGTAACCAAGAAACGTTGGATCTTTTTCCTCTGCACCCAACTGGTATTTTGGAAGGGAAAACAACATACCAGGTGTCTTCTCTGGCTTCAGTTTCTGCTGATAGTTCCACTGATATCAATGAAAATGATCCTTCCCCTCTTAACAAACCCTTCTTTGATTTTTTTACTACTTCTGGACAAGGTTCTTAG