Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12455 LG3 17044171 17047707 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
T/A 17044178 missense_variant p.Ser368Cys
G/T 17044275 splice_region_variant&synonymous_variant p.Ser335Ser
A/G 17044352 intron_variant
C/A 17044366 intron_variant
A/G 17044378 intron_variant
T/A 17044403 intron_variant
C/T 17044406 intron_variant
C/T,* 17044425 intron_variant
C/A 17044502 intron_variant
C/G 17044536 splice_region_variant&intron_variant
G/A 17044591 missense_variant p.Pro318Leu
T/A 17044594 missense_variant p.Glu317Val
G/A 17044646 missense_variant p.Arg300Cys
G/A 17044650 synonymous_variant p.Ile298Ile
A/G 17044677 intron_variant
C/T 17044706 intron_variant
A/C 17044743 intron_variant
A/T 17044745 intron_variant
A/T 17044746 intron_variant
A/T 17044756 intron_variant
T/C 17044856 intron_variant
A/G 17044864 intron_variant
T/C 17044952 intron_variant
G/A 17045369 intron_variant
A/T 17045374 intron_variant
A/T 17045375 intron_variant
T/C 17045380 intron_variant
G/C 17045393 intron_variant
C/A 17045406 intron_variant
G/C 17045516 missense_variant p.Thr283Ser
G/T 17045588 missense_variant p.Ala259Asp
G/C 17045626 intron_variant
A/G 17045633 intron_variant
T/A 17045762 intron_variant
A/T 17045777 intron_variant
T/A 17045778 intron_variant
G/A 17046194 stop_gained p.Gln186*
T/A 17046207 synonymous_variant p.Pro181Pro
G/A 17046208 missense_variant p.Pro181Leu
C/A 17046224 missense_variant p.Gly176Cys
G/C 17046376 intron_variant
G/T 17046532 intron_variant
A/G 17046567 intron_variant
A/T 17046823 intron_variant
A/G 17046843 intron_variant
C/G 17047103 intron_variant
C/G 17047108 intron_variant
A/C 17047125 intron_variant
A/G 17047133 intron_variant
A/T 17047134 intron_variant
A/T 17047137 intron_variant
G/T 17047626 missense_variant p.Gln28Lys
C/G 17047683 missense_variant p.Glu9Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12455.1
MLEVYNSLEATFNLLNKQELYFAMNLEQDGKVSYANGIVLNKLLPTVTEPILVVCLFQPYTPYTTIRNRECNNWRKFTPPYFGSEQDKISSDPKFGEDKEEQQTRFTTAPYLKLRFIRRATKRFWQRVNDSVIAGLEDSVHVMKLIYKGEGDNQTGRKKEEKIQGLRKTRTCRPNGMFLGPTHYMQEQLVRVVTLKRQLCLLLLNVANNNLEGTIPRNISSCKNLNRLNVHGNKLNETIPPALQSLEHDLFGAVTLFKAAILGITLGALVILLMVFLAACRPHTPPFHDGSLDKPVMSGSTVSITALVAALNKICTNMSHYYVCEQDRQESSVNNKIPVTFAIAPIVLVVVVAASFVEGICRCRTDHQGKQ*


CDS Sequence:
>Vu_12455.1
ATGCTGGAGGTGTATAACTCTTTGGAGGCGACATTTAATCTACTGAACAAGCAAGAACTCTATTTTGCAATGAACTTGGAGCAAGATGGGAAGGTATCCTACGCCAATGGAATAGTGCTGAATAAACTCTTGCCAACCGTCACGGAACCAATACTTGTTGTCTGCCTTTTTCAACCCTACACGCCGTACACTACCATCAGGAACAGAGAGTGTAACAATTGGAGAAAGTTCACCCCCCCATATTTCGGATCAGAACAAGACAAGATAAGTTCTGATCCCAAGTTTGGTGAGGACAAAGAAGAACAACAAACACGGTTTACCACTGCACCCTACTTGAAGCTAAGGTTCATTCGAAGAGCTACGAAGAGATTCTGGCAACGAGTTAATGATTCTGTAATTGCTGGACTAGAGGACTCAGTGCACGTAATGAAGTTGATTTATAAAGGAGAAGGAGATAATCAAACCGGCAGAAAGAAAGAAGAAAAGATCCAAGGACTGAGGAAGACGCGAACGTGTAGACCGAACGGTATGTTTCTCGGACCAACACATTATATGCAGGAACAACTTGTAAGAGTGGTTACCTTGAAGCGTCAATTATGTTTGCTTTTGTTAAATGTTGCTAATAACAATCTCGAAGGAACAATTCCTAGAAATATTAGCTCGTGTAAAAATCTCAACCGCCTCAATGTGCATGGAAACAAGTTGAATGAAACAATTCCCCCTGCTTTGCAAAGCTTGGAGCATGACCTCTTTGGTGCAGTTACATTATTTAAGGCAGCCATTCTTGGAATTACTCTCGGTGCCCTTGTGATTCTTCTAATGGTATTTCTGGCAGCTTGCCGACCACACACTCCTCCTTTTCATGATGGATCACTTGACAAACCAGTAATGTCTGGATCAACCGTTTCCATTACAGCATTGGTTGCTGCCTTGAACAAAATCTGCACAAACATGAGCCATTACTATGTATGTGAACAAGACAGACAAGAATCAAGTGTTAATAACAAGATCCCTGTCACATTTGCTATTGCTCCAATCGTCCTTGTCGTGGTTGTTGCTGCGTCGTTTGTCGAGGGGATCTGCCGCTGCCGCACCGACCATCAAGGTAAGCAGTGA


Promoter Sequence:
>Vu_12455::LG3:17047707-17049707(-)
TTACTTAAATTTGATTATGGTAATTATAATTTTTTTTAGATAAATAATCAATTTAGTACCATCAACATTAATATATTTTATTTTTAATGTAATAAATAATTATAATTAAAGTTTTAGTAGAAAATTTTATTTTTATTAATTTTGTTTGAATTCTATTGATCTAATTGAATTGTTACATATATTATTAAAGCCAAAAAATATATATTTATTAAAGGTAAAATTAGTATTAATATATAATTAATTTTTAAAATATATTTTTTATTTTATAAATTTAAAATAATTAGTGATTGTTTCAAAATTAACTAATTATTAATATGCTAATAATGATTATTTTTGAATAAATTCACTTACTAAATGCATGCTTAATTATATTGATCATAAAATTTAAACAAAAACAATAAAATTATTAAAAAAAAATATTTTTAATTTTTAATTTTAGAGTAATTAAGAAATAAATAGGATATGGTCACATCACTTCAAATAGCACAACCACTAAACTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGCTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCACTGAAGGGGAGGAGGGGTGAAAAGAATTTTAGAATGGTTAGTAGCTTTTAGTGGGACCCGCGGGTTAATGAAAAAGAAATTTAAGAAGAAAGAAGGAGAATAGGAGAGGGGTGCAGGGACGTATGTTTATTATTTATTATAGAATGCTTTACTTGTTTATTCAGATGCTAAATGATGAAGAAAAAAATAACTTTTTTACGGAAATGAATTGATACTTTTCAAAGTAATGAAATATTACACCAACCTATGTTGTATAACACAAACATCTTTGCACAGAAAAGTAGAAGAGAGAGAAAAAAATTTAACACCTATTGTAAGTATTTAACGGAAGGGACTTAATTGAGACAAATTTTACCAAATGAGGATATAATTGACACTTTTTTAAAAGAAGAAACTTAATTGACACAATTCATCATAACTGGAGACAAAATAAGCTATTAAGCCGAAGATAATTCTCTAAATCCACCACCTCCTGCTTCAAACCCATCTGCCAAACGGGCATGCTATATGGACGACTATGCAACCTCAACACTCATAATTTTTACTAATTTTTTACTCATAATATGCCGATTGTATTGCATTTGGTATTGAGATCTTTGAAGCTGCCTTTGCAAAGCCCCGTACCACCCGTGGAGTTGCTTATCATAAGATTCCTCATAATTATGAAGGCAAGTCTTACTTTTTTCATAGTATGCATTGATACCCTGTATTTAGAAAAATAAACATGAAATATTAAGAATTAAGCAAAAGCATTGACATACACAAGCAAAACTCTGTTAAGAAACAGAAGCAGCTGAAGCACAAACCCCATTCAATCCAGCTGATGGTAATAGTGCATTATCCGTTTCTTGACAATGATTCACTGGTTTCAGCTTTCTATAACCATTCTTAGGCCACTTCAACTTAGAGATAGTTTCCACGGAACCAAAAAATCCAGAGAGACTTGCTACCTTGTGCACATTTTTAGGCCCTCTCTCTTTCTTCTGCTGTCACGGTTCTTTTTCTTGCAGAAGCACTTTCATAAAATCTGAAGCGCATTTCAACTTCCTCTTCTTGCTCAGCAGAGGCTTCCTGTTCATCTGCACTTTCACAAATTGTATTGGTTTTAAAATTTCCTTTATAGATACACAGATCAAGAAAGAAAAAGGAGTCAAAAGGGACTACTACTAGGACCTGATTTTCGCTTCTTTCTTGCAGTTTTTTTCATCCTTTCCTCCATGGAAGCACGTAGTTTAAATTCTTCAGTAGATCTTTTAAACTCGACTGCGTTAAATTGTACTCCTATGTTTCTGGTGAATCGATTATCCAATGAATTGGCACTTTTGGAACAATGCGCATCACTATCCTCTCCCCAGTTTGTGCTATTAAGTTTAGATCCATTGAACAGATTCTGTA


Gene Sequence:
>Vu_12455(-)
ATGCTGGAGGTGTATAACTCTTTGGAGGCGACATTTAATCTACTGAACAAGCAAGAACTCTATTTTGCAATGAACTTGGAGCAAGATGGGAAGGTGATGAATCCAAGATTTCAATGGAATCTTCATCATACATTTCTTCAAAAAATTTAAGAAGATTTGCAAAGTGAGGCCCTTCATTATTGCATCGTATGGCTGATTGATAGTTTATCTCAGAAGTAGCCAAATTAAAAACATGAACATTGAAACCTGACTTTCCTTCGTATCTGAAAACCAACAGGTATCCTACGCCAATGGAATAGTGCTGAATAAACTCTTGCCAACCGTCACGGAACCAATACTTGTTGTCTGCCTTTTTCAACCCTACACGCCGTACACTACCATCAGGAACAGAGAGTGTAACAATTGGAGAAAGTTCACCCCCCCATATTTCGGATCAGAACAAGACAAGATAAGTTCTGATCCCAAGTTTGGTGAGGACAAAGAAGAACAACAAACACGGTTTACCACTGCAGTCCATTAAGTAGTTAAATTATTAGTTAATTTATATAAGTTCAGATTTTTATATATTATTTTTTTTCAGTTTTTTTAGTTTATTAAAAGTACAGTTTAGTATACTTTGGTTTGCCCAGCCCTACTTGAAGCTAAGGTTCATTCGAAGAGCTACGAAGAGATTCTGGCAACGAGTTAATGATTCTGTAATTGCTGGACTAGAGGACTCAGTGCACGTAATGAAGTTGATTTATAAAGGAGAAGGAGATAATCAAACCGGCAGAAAGAAAGAAGAAAAGATCCAAGGACTGAGGAAGACGCGAACGGTTCTTAATCAAATGTAGAGACGAGTTTCAGAGAAAACTTCACGAAGCTTCCAAATTTGTTTTTAGTTCTTTTTCCTTTTTCTGTTTCTGACTTTCTCTATAAAAAGGGAAGTCTTGTAATATACAGGGTGTGAAGTGGGTGACACACATTGCACCTAGTTTAGAGTAATTAAATTGTATTCTAGAAGAGATTTTTGACTGGCTGATATTCTTTTGGAGGTTTAAGTTGTAGCTAGGTTAGGCTAAATGTGGGGAAGGAGGAAAATGTGTAGTGAGAAATAGCATTCTAGAATGGGAAAATCAATATCCTATGCTGAAAATTCTTTAGCACTGCATTGTTGACGGGCAATATTTTGTTCTCTTCTGTTTCCATTTTTTTCATCAAATTTTTTTCATCAATTCTTTAGCACCTTATATATGGAATTCATTCTATTGCATGTGACATTATGTTTTACCTAAATCCTCTTTGCAAAATGACATACTACCTCAAGGCAGTTCTTGTTAGTTCACTGGTCTCAACTGGATGGAATTTTATTCTAGAATTAACCTTCTATGATTTTCCTATTGCAGAGAACTGAATGATAATAATTTAAGTGGACATATTCCCCTGAGCTTGGAAAACTTACTAATTTGTTTAACTTGTGTATGGTATATAGTGTAGACCGAACGGTATGTTTCTCGGACCAACACATTATATGCAGGAACAACTTGTAAGAGTGGTTACCTTGAAGCGTCAATTATGTTTGCTTTTGTTGTAAGTTTTATGAGTCACCCATCATTCCATCATTCCATCATTCCATCATTCCATCATTCTTGCAGAAATGTTGCTAATAACAATCTCGAAGGAACAATTCCTAGAAATATTAGCTCGTGTAAAAATCTCAACCGCCTGTAAGCAACTAAACTTGCACTAGTACTTTGTTACAATGTAGTTTATCTAATGCGTTAAGGTGACACTTTCATACCCTTTTAGCAATGTGCATGGAAACAAGTTGAATGAAACAATTCCCCCTGCTTTGCAAAGCTTGGAGCATGACCTCTTTGTAAGTTTCACCTTGATACATGAGCAACATTTACCTTAATGGACTTGCTATTCCGTTTTTTTTTTCTTTTAATGCTGTCTTTCCTATAAACACGTTGACGCACACACGAACTCCTGCAAGCACACTTAACTTATACTACCATGCCTCAACCAATTATCCTTTTGTTTAATTGGTTATTATGGCTTCATGACATTGTTATGGTCATCCTCAGGAATCTTTCTTCCAACAATCTTCAGGGTGCAGTTACATTATTTAAGGCAGCCATTCTTGGAATTACTCTCGGTGCCCTTGTGATTCTTCTAATGGTATTTCTGGCAGCTTGCCGACCACACACTCCTCCTTTTCATGATGGATCACTTGACAAACCAGGTACTTATCTTTGTTTCATCCTCACATTGTAAGCTGTGGCCTTCAATCACCATAGGTTCAAAGAGCAAGCTGGGGTTTTTTAGATTTCAGCTGTCTTTAGATACTTTAGTACCTAACCTTAAGCCAGCAGTGTTAGAAAATCTGAAATTGATTGGATTGTGTAATTGTATGCATTAAAGTTTACACGCCAACTTTTAACTCTATTGGATTTTGTAAGGTTTATAATCATCTGGCAGTATTTTATTGCACTCTACCCTTTGAAACATAATTTGACGAGTTACTGACTTCATGAACTATGGAATTGACAGTTAAATACAAGCTATTAGAATAATTCACAGGGATGTGAAATCATCAAACATTTTATTGGACGCAGACTTTGAGCCCCATCTCACTGATTTTGGCATTGCCAAAAGCCTCTGCCCCACAAAGTCTCATACTTTTACTTGACTTGCTAACTGGAAGAAAAGCTGTTGACAATGAATCCAACCTCCACCATCTGGTGAGTCTACTACACATTTTCATGGGCTTAGATATATATTTTGGAAATCAATGACAACATTCTATTAAGAAGATTACTGAGATAAAAATTCAATTTTGATTTAGAATACCCAATACATATCCATGAAACTGCACTTATTATTCAAGATTGCAAAATCTAGTTGCTATAAATCACTGTTAACTTATTGTTAACACTATTCTTATCCGTCTCGTTCACATATGGCTCTTTTTGCAGATTTTGTCCAAGGCAGCAACCAATGATGTATAATAGAGCGAGTTGGTAAACCTTTTCTAAAGCTCTTGGTTTTTGCATGTGGCAGTAATGTCTGGATCAACCGTTTCCATTACAGCATTGGTTGCTGCCTTGAACAAAATCTGCACAAACATGAGCCATTACTATGTATGTGAACAAGACAGACAAGAATCAAGTGTTAATAACAAGTTAAGAGTAGGGCTGGGCAAAATAACTTTAACTATACTGATCATAATTAACTGTACTATTTTATACTAAAAGTAACTAATTCACTTATACCAAAAACTAATTAAACTATTATCTAGTTCAGTTAAGAAAAACTGGACATATTATTTTTTCAGTACAGTTAACTGAAAACCATTTGCTTATTTTTAATGTTTTCACATCACTCTGTGACTCTGACATTTGAGGCCTAAGCGAGGTTGGGGTTGAGGGAGGCTAGTCGTCAAGGATCCCTGTCACATTTGCTATTGCTCCAATCGTCCTTGTCGTGGTTGTTGCTGCGTCGTTTGTCGAGGGGATCTGCCGCTGCCGCACCGACCATCAAGGTAAGCAGTGA