Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12449 LG3 16954349 16957364 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 16954424 missense_variant p.Ala26Thr
G/A 16954441 synonymous_variant p.Leu31Leu
G/A 16954448 missense_variant p.Val34Met
G/T 16954483 missense_variant p.Leu45Phe
T/C 16954484 missense_variant p.Ser46Pro
G/C 16954525 missense_variant p.Trp59Cys
C/T 16954526 missense_variant p.Arg60Cys
C/G 16954546 synonymous_variant p.Ala66Ala
G/A 16954598 missense_variant p.Ala84Thr
C/T 16954599 missense_variant p.Ala84Val
T/A 16954600 synonymous_variant p.Ala84Ala
T/A 16954610 missense_variant p.Trp88Arg
G/A 16954611 stop_gained p.Trp88*
T/C 16954621 synonymous_variant p.Cys91Cys
A/C 16954623 missense_variant p.Tyr92Ser
G/A 16954650 missense_variant p.Ser101Asn
A/T 16954652 missense_variant p.Met102Leu
A/G 16954657 synonymous_variant p.Arg103Arg
G/A 16954681 downstream_gene_variant
C/T 16954689 downstream_gene_variant
A/G 16954697 downstream_gene_variant
A/G 16954701 downstream_gene_variant
T/C 16954764 downstream_gene_variant
A/T,* 16954787 downstream_gene_variant
T/G,* 16954791 downstream_gene_variant
A/C 16954794 downstream_gene_variant
C/T 16954909 downstream_gene_variant
T/C 16954949 downstream_gene_variant
T/A 16954999 downstream_gene_variant
T/A 16955001 downstream_gene_variant
A/C 16955014 downstream_gene_variant
T/G 16955017 downstream_gene_variant
T/A 16955025 downstream_gene_variant
C/T 16955047 downstream_gene_variant
C/T 16955081 downstream_gene_variant
T/C 16955111 downstream_gene_variant
G/T,A 16955153 downstream_gene_variant
G/C 16955155 downstream_gene_variant
C/T 16955194 downstream_gene_variant
C/T 16955198 downstream_gene_variant
A/G 16955200 downstream_gene_variant
C/T 16955201 downstream_gene_variant
T/A 16955202 downstream_gene_variant
C/T 16955204 downstream_gene_variant
C/T 16955205 downstream_gene_variant
C/T 16955207 downstream_gene_variant
C/T 16955213 downstream_gene_variant
T/G 16955224 downstream_gene_variant
G/C 16955227 downstream_gene_variant
T/C 16955239 downstream_gene_variant
C/T 16955265 downstream_gene_variant
G/A 16955270 downstream_gene_variant
C/A 16955284 downstream_gene_variant
C/T 16955296 downstream_gene_variant
C/T 16955305 downstream_gene_variant
A/G 16955309 downstream_gene_variant
A/T 16955311 downstream_gene_variant
A/G 16955320 downstream_gene_variant
C/T 16955326 downstream_gene_variant
G/A 16955328 downstream_gene_variant
A/C 16955336 downstream_gene_variant
G/A 16955339 downstream_gene_variant
T/A 16955362 downstream_gene_variant
A/G 16955473 downstream_gene_variant
T/C 16955478 downstream_gene_variant
T/G 16955538 downstream_gene_variant
A/T 16955540 downstream_gene_variant
T/C 16955553 downstream_gene_variant
A/T 16955614 downstream_gene_variant
T/C 16955621 downstream_gene_variant
G/A 16955718 downstream_gene_variant
A/G 16955727 downstream_gene_variant
G/T 16955767 downstream_gene_variant
G/A 16955772 downstream_gene_variant
T/C 16955806 downstream_gene_variant
C/T 16955807 downstream_gene_variant
C/A 16955815 downstream_gene_variant
A/G 16955817 downstream_gene_variant
A/G 16955848 downstream_gene_variant
G/A 16955857 downstream_gene_variant
G/C 16955868 downstream_gene_variant
C/T 16955890 downstream_gene_variant
G/A 16955912 downstream_gene_variant
G/A 16955927 downstream_gene_variant
C/T 16955931 downstream_gene_variant
C/T 16955934 downstream_gene_variant
C/T 16955957 downstream_gene_variant
C/T 16955958 downstream_gene_variant
T/A 16955972 downstream_gene_variant
T/C 16955985 downstream_gene_variant
C/T 16955989 downstream_gene_variant
C/A 16956007 synonymous_variant p.Thr110Thr
C/T 16956009 missense_variant p.Thr111Ile
C/T 16956015 missense_variant p.Ala113Val
G/A 16956027 stop_gained p.Trp117*
G/A 16956035 missense_variant p.Val120Met
C/A 16956039 stop_gained p.Ser121*
G/A 16956058 downstream_gene_variant
A/G 16956059 downstream_gene_variant
G/A 16956062 downstream_gene_variant
C/G 16956065 downstream_gene_variant
T/C 16956072 downstream_gene_variant
T/C 16956080 downstream_gene_variant
G/A,T 16956137 missense_variant p.Cys126Tyr
T/C 16956172 missense_variant p.Cys138Arg
G/T 16956198 missense_variant p.Lys146Asn
C/T,A 16956232 missense_variant p.Leu158Ile
T/C 16956244 missense_variant p.Cys162Arg
G/A 16956248 missense_variant p.Gly163Glu
C/T 16956263 missense_variant p.Ser168Leu
T/C 16956280 missense_variant p.Ser174Pro
T/C 16956283 missense_variant p.Ser175Pro
C/T 16956288 synonymous_variant p.Leu176Leu
G/A 16956295 missense_variant p.Ala179Thr
G/T 16956305 missense_variant p.Arg182Leu
A/T 16956316 missense_variant p.Thr186Ser
T/C 16956320 missense_variant p.Leu187Ser
T/C 16956325 missense_variant p.Ser189Pro
G/A 16956347 missense_variant p.Arg196His
G/A 16956356 splice_donor_variant&intron_variant
A/G 16956361 splice_region_variant&intron_variant
T/C 16956442 downstream_gene_variant
G/A 16956450 downstream_gene_variant
C/G 16956459 downstream_gene_variant
C/T 16956465 downstream_gene_variant
G/T 16956481 downstream_gene_variant
C/G 16956491 downstream_gene_variant
G/T 16956502 downstream_gene_variant
C/T 16956513 downstream_gene_variant
T/G 16956515 downstream_gene_variant
C/T 16956516 downstream_gene_variant
C/T 16956519 downstream_gene_variant
T/C 16956525 downstream_gene_variant
C/A 16956535 downstream_gene_variant
C/T 16956538 downstream_gene_variant
G/A,* 16956549 downstream_gene_variant
G/A 16956559 downstream_gene_variant
T/C 16956564 downstream_gene_variant
G/A 16956568 downstream_gene_variant
G/C 16956570 downstream_gene_variant
T/G 16956571 downstream_gene_variant
G/A 16956577 downstream_gene_variant
T/G 16956579 downstream_gene_variant
G/A 16956584 downstream_gene_variant
G/A 16956588 downstream_gene_variant
C/T 16956596 downstream_gene_variant
C/T 16956657 downstream_gene_variant
G/A 16956661 downstream_gene_variant
G/A 16956672 downstream_gene_variant
T/G 16956685 downstream_gene_variant
G/A 16956695 downstream_gene_variant
A/G 16956716 downstream_gene_variant
G/A 16956727 downstream_gene_variant
C/T,* 16956746 downstream_gene_variant
C/T 16956747 downstream_gene_variant
G/A 16956748 downstream_gene_variant
T/C 16956759 downstream_gene_variant
T/C 16956765 downstream_gene_variant
C/T 16956768 downstream_gene_variant
A/G 16956769 downstream_gene_variant
A/G 16956770 downstream_gene_variant
C/T 16956793 downstream_gene_variant
T/C 16956794 splice_region_variant&intron_variant
G/A 16956802 missense_variant&splice_region_variant p.Arg199His
T/A 16956803 splice_region_variant&synonymous_variant p.Arg199Arg
G/A 16956807 missense_variant p.Asp201Asn
G/A 16956815 synonymous_variant p.Gln203Gln
T/C 16956816 synonymous_variant p.Leu204Leu
C/T 16956841 missense_variant p.Thr212Ile
A/G 16956851 synonymous_variant p.Arg215Arg
T/C 16956877 missense_variant p.Phe224Ser
T/C 16956899 synonymous_variant p.Cys231Cys
T/G 16956903 missense_variant p.Trp233Gly
G/A 16956911 splice_region_variant&synonymous_variant p.Leu235Leu
G/A 16956927 downstream_gene_variant
T/C 16956964 downstream_gene_variant
G/A 16956974 downstream_gene_variant
A/G 16956975 downstream_gene_variant
T/C 16956978 downstream_gene_variant
C/T 16956987 downstream_gene_variant
T/G 16956989 downstream_gene_variant
T/C 16957004 downstream_gene_variant
T/G 16957011 splice_region_variant&intron_variant
G/A 16957013 splice_region_variant&intron_variant
A/G 16957045 splice_region_variant&intron_variant
T/C 16957051 downstream_gene_variant
A/G 16957055 downstream_gene_variant
A/C 16957079 downstream_gene_variant
T/G 16957156 missense_variant p.Val253Gly
G/T 16957182 missense_variant p.Ala262Ser
A/G 16957185 missense_variant p.Lys263Glu
G/A 16957192 missense_variant p.Arg265His
T/A 16957198 missense_variant p.Phe267Tyr
T/C 16957212 synonymous_variant p.Leu272Leu
T/C 16957238 synonymous_variant p.Asp280Asp
G/T 16957253 missense_variant p.Lys285Asn
G/A 16957291 missense_variant p.Arg298Lys
C/T 16957334 synonymous_variant p.Ser312Ser
G/A 16957336 missense_variant p.Ser313Asn
A/C 16957342 missense_variant p.Tyr315Ser
G/A 16957344 missense_variant p.Glu316Lys
T/C 16957357 missense_variant p.Leu320Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12449.1
MWERWGYLAPELTRTGKPTTSSDVYAFGVLLEVVCGRRPIEVKALSEELVLVDWVWERWRMGAPLAVVDPRLGGAFDEVEVLVAIKVWLYCYAEAPEKRPSMRQVVSLKNHYCLGSLEAGVKSLALLPLPFFFFFFLVFSFFFLVQEPFFIFLEAIVASSSLRAIAIVARAIVVVSRLCLITAANNFVVVQSPPPPPHSFRSPVVCLKGSKNRISTQRFLCSLFYTYDLKLLMVIVERVEGKGLIRAYPWGANVNMANALGPAKKRNFGDKVLKVGLVVKDWSQRKSLVSASIVENGVRRLMQRREGDEMRESSEYEKGLLE*


CDS Sequence:
>Vu_12449.1
ATGTGGGAACGATGGGGTTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCTTTCGGAGTGTTGTTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGTCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCCGTGGTGGACCCTAGGTTGGGTGGGGCATTTGATGAGGTGGAAGTTTTGGTAGCTATTAAAGTGTGGTTGTACTGTTACGCGGAGGCACCAGAGAAGAGGCCCAGCATGAGACAGGTGGTGAGTTTAAAGAACCACTATTGCCTCGGGTCCTTGGAAGCTGGTGTCAAAAGCCTCGCGTTGCTTCCTCTGCCATTCTTCTTCTTCTTCTTTCTTGTGTTCTCCTTCTTCTTCCTTGTGCAAGAGCCATTCTTCATCTTCCTTGAGGCCATTGTTGCTTCGTCTTCCTTGCGGGCCATTGCCATTGTCGCGCGGGCCATTGTTGTCGTCTCTCGCCTCTGCCTCATCACGGCTGCCAACAACTTTGTCGTCGTGCAATCGCCTCCGCCTCCGCCTCACTCGTTTCGATCACCAGTTGTTTGCTTAAAGGGCTCAAAGAACCGGATCTCGACTCAAAGATTTCTCTGTTCTCTGTTTTACACCTATGACCTCAAGTTGTTAATGGTTATTGTTGAGAGAGTGGAAGGCAAGGGGCTGATTAGAGCATATCCCTGGGGTGCCAATGTCAACATGGCCAATGCACTCGGACCAGCTAAGAAACGCAATTTTGGTGACAAGGTTTTGAAGGTTGGATTGGTTGTGAAGGATTGGTCGCAGAGGAAGTCGTTGGTGAGTGCTTCAATTGTGGAGAATGGTGTGAGAAGGTTGATGCAAAGAAGGGAAGGTGATGAGATGAGAGAGAGCAGTGAATATGAGAAAGGCCTTCTTGAGTAA


Promoter Sequence:
>Vu_12449::LG3:16952349-16954349(+)
GCTTATTTTGATTATCTGATTGTAATCTTCAAACCATATTTTAGTGAAAAAGGTTAATCATTATTTATAGTGATTAACGACTGGACGTAGAATCTTTTGTTTCGAACCAGGATAAAAATTTTGTGTTGATTTTCTTGATCCCTAAACTCTTAGCACATCAACTGTTCGATAAAAGTTCGCTAAGAAAATCAATTTTTGAAACCAACTATTTTAACTTGTGTTGTGACCGTTACACGCTTTCCATTATCTATATTTTATTCCGCTGCGCGACTCTATAACTGTACCGATTGTTCCTACAATTGGTATCAGAGCAGTTATAATACTACTAAGAAACCGAACGGTATAACCTAAGATGAACAATTATAATTCAATCAGAACACTTAGGATTAATCTTACAAACTATTCGTCAAACCTAACACTTTTTAATGAAACCGAATGTTACGACAATATGATCAGACTATGCACAGGAACAACTATCTCAGTATAATCAATGTAATTAAGCCTAGTATAAGGAGGAGATTTAATACTAATATAAGAACTATTGCTAACCAGAATACCCAATCCGATACAACTGATCATTAATACTTAATCATAAATACTTAGAATACCAGTCACTCCCTAAAACTCGAGCGGTCATGCGCTGGTAAGACTAAAATGCTAACTCTATTGATAAATCATTAACTGACCATGACCGAACAGTCGAGACTGAACACAGCTTTTCTGCATAATTCTGTAGAACTCTTATAGACTCATACAGAACCACCAAAACCCAAAAACATACATTTCATACCATCATAAATCATCAAATCAATTCATTCCATACATACACAGAATCATCCCACACACAATTAAATTAAATAGCTCCCCTTATCTCGTAACAGAAAGAAACACTCTTAAAGAAGATCTTGCTCACCACCAAAAATCTCAGAACCTAAGATTCACTGATTTGGGAAAAATAGACCAACCACAAACCAAAAATGTGATTAGAACCTTAGAAGAAGAAGAAGATAAACACATGCAAACAGAACTTGGTTTGCATGTGCCCGAAACTTAGATTTTCTTAAAAGTAGAAAGACCTACCAGCTCAAACCACTACTTAATCGTTTGAAAAGAGAACCCTTACCACCTGCAAACCTCAAACACCCTCTGATGAATGATCAGATGAAGGAAAACGTGAAATCAGTGGAGGAAAATATGATATTTTAGAGATAAGTTAGAGAAGAAAATGAGTTTTCAGAAAGTTAGGGAAGAGATTGCATGCAGAAAGTGACACCTGATTTGAAATTTTCCCTTAAATACTACCGTCAAAAACCGATCGGTCCACTTCGCTGCTCACACCTGTCTTCCACTTTCTGAATTTCTAAATTCTCACCCCTCCACCTGGCTTCCACTACTCTACATAATTTAAGGTTCTGACAATTTTTTTTTATGATAATAAAAATAATAAAACTATTATTATTGTTACTATTATAATTATAAAATTAAATATAAATAATTTTTATATTTTTATTGTAAGTACTTTTTATTTATTTTATAGGTAATTTTTAATTAAAAAATAGTTAAATTTAAAAATAAAACATCAAATAGAAAAGAAATTAAATATAAACCATAGTCAAGGTAATATTGATAAAATAATTATTTTAATTAAAAAAATTATTTAAAAGGTAAAATTGAAATAGATAATTGTATTATAGGTAATTTTATTATTATTATTAGGTTTAATACCCAATTTTGTCTCCAGTTTGGTTCGAAAATCTCAATTTAGTCCCTCGTTAGAAAAGTAATTGTAATGGATCCTTACTTGTACATTTGTGAGTCAAGTTAGTCCCTTTCGTTAAATATAAGCAAACGGTGTTAATGGATGATGATGTGGCAGCAGTTAGTGGTTAGGTATCAAAACGCAATAGTGTACGTGCTTACGTGGTGTTGAATTAGAGAAGTTTGGGTTTTATTAGAAATTGGGTTTATTTTAATTGGGAATAAATTCGCAGTTGAACTCA


Gene Sequence:
>Vu_12449(+)
ATGTGGGAACGATGGGGTTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCTTTCGGAGTGTTGTTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGTCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCCGTGGTGGACCCTAGGTTGGGTGGGGCATTTGATGAGGTGGAAGTTTTGGTAGCTATTAAAGTGTGGTTGTACTGTTACGCGGAGGCACCAGAGAAGAGGCCCAGCATGAGACAGGTGGTGAGGTATTTGGAGAGGGAGGTGGCGCGACCTAGTAAGGTTTCATGTACTCCTTTTTATTATTCATATATGTGCCACTGTTACCAATACAATACCACCATACAGTTTAATTTCTTATTTTTTAAAATGAAAAGTAGAAGGAAATTGAAAAACTGAAAACTCGTAAAATGAATATAAATATATTTTACAAGAAAGAAAAATTTAAATACACGAAAATGAAAGAAAAATAATTCAAAACTTCTTAACTGTGAATTAAGAAGATGCAGGAATAATATTTTTATACAATATATTTCCATTTGATTTCAAACAATTTTATAATATTTCTAGCAATATATTTTTTTTCATATATAATTTCTATGATTTTTTATTATGAACAATTTTCTCCTACATATAGTATTATTTTTTATTTAATTAAAGCTTAGTGGTGAAACAGAGAAATGGACATTGTCATTTTACCTCTGCGTCGGTGCTTTGCTTCAGTTCCTCCGAGAGAGGTGGCATGCAGACAATTGCATTTTGACACCTAACCACTAACTACTGCCACATCATCATCCATTAACTCCGTTTGCTTATATTTAACGGAAGGGACTAACTTGACTCACAAATGTACAAGTAAGGATCCATTACAATTACTTTTCTAACGAGAGACTAAATTGAGATTTCCGAACCAAAATGGGGACAAAATTGGGTATTAAACCTTATTATTATATGTATAGATAATTATTTATTTTATTATTATTCTTTATATTATTATAATTTTATTATAGTATATTATTTACATTATACATATATTATTTGATACTTATTTTATACTTTCCTTCAAAATTTATATAATTATCATTTATTTATAAATATTTGACATTCAATATGATTTTTAATATATTAAATTTTGATAATATCATTTTTTGTGATTTTTTAATATAAGTTAATTAATTAAGACAGATAAAAAAATTATAATCGTTAAATATATAGATAAGTACAAATTTTTACAGAGATACAATAATGAAACTTGTACCGAAACCATTGTCATAGTAAAAAATTTGTTTTCTAACGCGCTATATAGATTTCAGTTTTATCAAAACCGAAGCATATAAAAACACAGTGGCTCGTTTGTAATAATAGCGAATGTTTATGCTTCGGTTTCAGGACACCCAAAGCAGAAAGGGTCTTTTACCTCGGTTATAAAAGAAACCGAAGCATAAAAGTCTACCATTTCCACCTACTTTCTGCAAGTCAGACCTTTTGTCTGACACACCTTTTCTGGAAACGCCTATTGCCTCGGTTGAGAAGAAACCGAGACATAAAAACTTGTCAAATCTACTTTTCTGAACAGTTTAAAGAACCACTATTGCCTCGGGTCCTTGGAAGCTGGTGTCAAAAGGTTCATAGGCATCGAGTGGGCTTATAATCGAGGTATTATCACTTGGTTAACTTAAGAAATTTTAACCATTCTCTTCTTCGCAGCCTCGCGTTGCTTCCTCTGCCATTCTTCTTCTTCTTCTTTCTTGTGTTCTCCTTCTTCTTCCTTGTGCAAGAGCCATTCTTCATCTTCCTTGAGGCCATTGTTGCTTCGTCTTCCTTGCGGGCCATTGCCATTGTCGCGCGGGCCATTGTTGTCGTCTCTCGCCTCTGCCTCATCACGGCTGCCAACAACTTTGTCGTCGTGCAATCGCCTCCGCCTCCGCCTCACTCGTAGCACCTCTGCCTCTGTCGTCACGCCTCTGTTGTCGCATCTTTGTCGTCGCGCCTCTGTCGACGCGCCTCTGTTGTCATGCCTCTGCCTAGGGTTATAATCCAGATCCCCTTCCCCAATTTTAGTGTTTTTATCCCCTTTCTCAGATCTACATTGCTTCAGCTGTTATCCCCTTTCTCTCCCTTTTTTTTTGGGTTTCTCAGATCATATGGTGTTGTTCGTTGACAGCCTGGTGCGGCCCGTGCCGCTGGCCTAGCACCCGGTCCAGCCTGTTCCCCTCAACCCCCGTGAATGAAGCTGCGGCGGGACCGTCCGGCGCGCTGTTGTTTCCCTTGGGCGACGAGTTTCCTACTACAGCAACACCATCTCTGAGGTCGCCACAAGGGACTCCGGCGTTATCAATGCCCGTACCAATTTGAGGGTTTTTTGGATTTCTCTTCTACAGGTTTCGATCACCAGTTGTTTGCTTAAAGGGCTCAAAGAACCGGATCTCGACTCAAAGATTTCTCTGTTCTCTGTTTTACACCTATGACCTCAAGTTGTTAATGGTTATTGTTGTACTTTTTTGTTGCTCAAAGATTTCTCTGTTGCTCAAAAATTTTGCTAGTTATGAACTCGATCTGCATTTTTCTTGAATTTTATCTTGTTTGTTTCTTGAGGAGAGAGTGGAAGGCAAGGGGCTGATTGTAAGGGATTGGACACCCCAATTGGAAATTCTGAGCAACCCTTCAACAGGAGGGTTTATGAGTTATTGTGGATGGAACTCGTGCTTAGAGAGCATATCCCTGGGGTGCCAATGTCAACATGGCCAATGCACTCGGACCAGCTAAGAAACGCAATTTTGGTGACAAGGTTTTGAAGGTTGGATTGGTTGTGAAGGATTGGTCGCAGAGGAAGTCGTTGGTGAGTGCTTCAATTGTGGAGAATGGTGTGAGAAGGTTGATGCAAAGAAGGGAAGGTGATGAGATGAGAGAGAGCAGTGAATATGAGAAAGGCCTTCTTGAGTAA