Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12382 LG3 16375602 16376537 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cell differentiation, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   sequence-specific DNA binding, zinc ion binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/A 16375778 downstream_gene_variant
T/C 16376042 synonymous_variant p.Ser43Ser
A/T 16376043 missense_variant p.Ser44Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12382.1
MLTAKTAGPKYSKNVPIQKVSFTAKDLHQFQTNSPVSVFENSSSSSSVENSNLELPVIPTKRPRSKRRPLSNITLLYSIPFIFTSPVFQKSEFEAQPFGKFSSVIKKQRKKNIPMVGNKIEMKKSSSEESVGIRKCMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLFAEYRPAASPTFVASLHSNSHKKVLEIRNRDTHVTVR*


CDS Sequence:
>Vu_12382.1
ATGCTTACAGCGAAGACGGCAGGTCCTAAATATAGCAAAAATGTTCCTATCCAGAAAGTCTCTTTCACTGCAAAAGATTTGCACCAATTCCAAACTAACAGCCCAGTTTCTGTTTTTGAAAACAGTAGTAGTAGTTCTTCGGTTGAGAACTCTAACTTGGAGTTACCTGTTATCCCAACAAAGCGTCCCCGAAGCAAACGCAGGCCTCTCTCAAACATCACCCTGCTATACTCCATTCCTTTCATCTTTACTTCACCAGTTTTTCAAAAATCAGAATTTGAAGCACAACCATTTGGGAAATTTTCAAGCGTGATAAAAAAGCAGAGGAAAAAGAACATTCCCATGGTAGGTAACAAAATTGAGATGAAGAAATCCTCATCAGAGGAATCAGTTGGTATCAGAAAATGCATGCACTGTGAGGTGACAAAGACACCACAATGGAGAGAGGGACCAATGGGTCCAAAGACCCTATGCAACGCTTGTGGAGTTCGGTACCGCTCTGGCAGGCTCTTTGCTGAATACCGTCCTGCAGCTAGCCCCACTTTTGTAGCATCATTGCACTCTAACTCTCACAAGAAGGTCTTAGAAATTAGAAACAGAGACACCCATGTGACAGTTAGATGA


Promoter Sequence:
>Vu_12382::LG3:16373602-16375602(+)
GTAGGCATTTGATTTCTAATGTCGTCCCCTTTGACATAGTTTCATTTTTGGGTCTGCACCATCTGTATCCTAGACTTCTCCTTCCACGCCTGCCTCTATTCCACTCCACTTTTGTTCTCTAGAGGAGTCTTCATCCCCTCCTATCTTCTCCACCATTGTAGCTGTATCAATATTATCCTCATGTACTACTGCCACCTAGCTCCAACTCCACAAACCCAGCTTTTGCGCTGACTCCTTCACATCTTCCTCCAATCCCACCTCCTGAATTCAAAATTCCCATTGCTCTTCAAAATGATATACGTTTTACTTGTAATGCTTCTCCTCTGCCAAAACATCTCCTGTGAGACTAATTTTGTCCATTGTTACCATTTGACATTAGCCTCTCTACTAGTTGAACATAATGAATGTCATTCTACATTGTTATCTGCTTGAGGAAGTCTATATGGATCAATCATTTTGCTTTGTTGCTCGGTGGCACTCTTCTGATGATATATATTGATTGCAACATTCTTTATATGTGCTCAATGTAACAGTTTCTTTTATAGTATAATGTTTAAAAGACAGCCAAAGAATATGCTGGAATTGAAACAGATTATATTCAGAAAGCACAACTGAAAATCTCAACAACAATTATCCAAAGAGAAGAACAGAAACTTCTAATAGGCAGAACGTTCGTCATGGCCACGGCATTGCAGAACCTGATCAGAATAATGATGAAAGAGATCAGACAGTCTGAGATTGAATAGAGAGCATCAGAGAGAAATTAGAGAATGATACCACATACACATCTCTCACTGCCCAAAGTCCTTCCATAAAACATTCTTTGTTTGTTGCCTCATGCTTTTCCTAATCCCCTCAGCTTGCAGATCCCTTGCCACGTGGCTTTTTTTCCTAACAACCTTTCCCTCCTTGTCTCTCTCTTCAACATTTCTTGTGCACGTTACACTCAAGGAATCCTCCAGAGCATAGTTCTGCAGATTTAGTATTGTGATTCAACAGTTTGGTGTGACTCAGAGAAAAGCCTAACCACTCTGTTTTCCATTGTCACTCAATTGCTAATTGCACATATCTGGTTCTTTATGTTGATAATATTGTCAACATAAGTAGTGATCATATTGGTATCGCACGAGTGAAGGAGCATCCTTTCAAGCCTTTCCAAACAAAAGATCTTAGCAAACTAAAATATTTATTGGAGATAGATATGTTGCATAGTTCTAAAGTGGGATTATCATATCTTAATGGAAGTGTGCAGTGGATATTCTAGAAAAAAAATGAATCTTAAATTCCAAAACAATCGACACCTTATTGGATCCAAGTGTCAAACTCCTCAAATTTTTGGAGGAGCTCTTGGAAAGGGTCAGGGTCCTTTGTACGAAACAAAGGACACACTTGAGTTGTGAGGGCAAGTTGGGAAGGCTCCTCCATTAATAAAAGGTCCACCAATCTTCTCTTAAAAATGAAAAAATAAAAATGTTGTATTTTGGTCTAGTACGAAAACAAAGTATGTAGTTTTATAGCCAAGAAGAAGCTTAGATGGCTCAAATAGTTGCCTAACTAAAGTTTGGGAAAGTTACACAGTACTTATTTGTGATAATGGTGTTGCCATGTATATATAGCGAGTGAGTTTGTTCCATCCTCCTTAGGTTTCTCCTCCAATACAGGGACAAGAAGACTAAAGCTAATCATGTGGTGATTCTCTGAATTCCCTTGAAGTGTCCTGCTTATGCTTTTTGTCTTCCTTTTTTTCTTTTTTGTATATTTCGAACTTGAATAATAGGAGAGGGGACTTTTTTGGAGTTAAAGGTATGCTTAAAGTGTTTATTGGTTTGTTGTTGTCCAAAATCCTGAACTTATCATGTATGCATACTTTGCAGCTATTAGTTGTGAAGAATGATAGTTACACCATGAAAAATTGAAAATCTGTCTCAAAATTATCTTGTTACTCGTGCCTCTTAACTTTATGGGTATTGCCCTCAAAAAGTGACAGAAGTTCTACGCAA


Gene Sequence:
>Vu_12382(+)
ATGCTTGTAAGTTGGGGTCTTTTTGTTAATTTGAATTATGAGTATATGGCATTATAGTATTGACAGGTTCTTTTCTGTTCCATTATAGTATTGACTTTGTGCTATGACATCTGATAATTTAGTAGCACACATGTTTATGAGCTGTGGCACACATGTAAATGCTGGAAGATATTACCTCATGCTCTTATCTCATTACTCAAAACATGAACTAATGCTGAATTTTTATCCTGTTTTTGTGTACAAACACATATTAACTGTCTATGAATCTGATTGGTTTTATCCTTTTGGTGGATTCGATTGTTTTTTCTCAAAAAACAGACAGCGAAGACGGCAGGTCCTAAATATAGCAAAAATGTTCCTATCCAGAAAGTCTCTTTCACTGCAAAAGATTTGCACCAATTCCAAACTAACAGCCCAGTTTCTGTTTTTGAAAACAGTAGTAGTAGTTCTTCGGTTGAGAACTCTAACTTGGAGTTACCTGTTATCCCAACAAAGCGTCCCCGAAGCAAACGCAGGCCTCTCTCAAACATCACCCTGCTATACTCCATTCCTTTCATCTTTACTTCACCAGTTTTTCAAAAATCAGAATTTGAAGCACAACCATTTGGGAAATTTTCAAGCGTGATAAAAAAGCAGAGGAAAAAGAACATTCCCATGGTAGGTAACAAAATTGAGATGAAGAAATCCTCATCAGAGGAATCAGTTGGTATCAGAAAATGCATGCACTGTGAGGTGACAAAGACACCACAATGGAGAGAGGGACCAATGGGTCCAAAGACCCTATGCAACGCTTGTGGAGTTCGGTACCGCTCTGGCAGGCTCTTTGCTGAATACCGTCCTGCAGCTAGCCCCACTTTTGTAGCATCATTGCACTCTAACTCTCACAAGAAGGTCTTAGAAATTAGAAACAGAGACACCCATGTGACAGTTAGATGA