Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12302 LG3 15194388 15198485 PREDICTED: SRSF protein kinase 1-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
SNP Position Effect Amino acid change
C/T 15194636 3_prime_UTR_variant
T/C 15194648 3_prime_UTR_variant
C/T 15195025 synonymous_variant p.Gln467Gln
C/A 15195530 upstream_gene_variant
C/T 15196884 missense_variant p.Val267Ile
C/A 15197658 upstream_gene_variant
C/A 15197667 upstream_gene_variant
A/T 15197729 upstream_gene_variant
A/T 15198075 upstream_gene_variant
T/A 15198355 missense_variant p.Glu2Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12302.1
MERNENYSSEEECMEDYRRGGYHAVRIGDAFNNGRYVVQSKLGWGHFSTVWLAWDTLISRFVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGVPLHMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLQSLINPSKDPRKSGASLILPNTKDKAASNNGTHQDNKILNGDPLKNQKKKVKRKAKVAQGFVGTETSEEAEDYKGPEQEDCGNDVKSSVESVEDKPDSSLSKDESTKNFEKDASQGSHSHMSSSRLMKKKLLAAVDLRCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELVGKMPPKIALGGRYSREFFNTHGDLRHISNLRFWPMDKVLMDKYNFSEQDTKDMVDFLAPILDFVPEKRPTAAQCLSHPWLNAGPRTLQPSITSAQPDAVNEELSERRKREAAEKESVEIGLRNIAIKGTSEPLKDSQSVKSSKQI*


CDS Sequence:
>Vu_12302.1
ATGGAGAGGAACGAAAATTACAGTTCAGAGGAGGAATGCATGGAGGATTACAGGCGTGGAGGGTACCATGCCGTTCGAATCGGCGATGCTTTCAACAACGGCCGCTACGTCGTGCAGTCCAAGCTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCTTGGGACACTCTCATTTCGCGTTTTGTAGCCCTTAAAATTCAAAAGAGTGCCCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGCCGAGGGGGACCTGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTCAAGCATTCGGGGCCTAATGGACAGCATGTGTGTATGGTTTTTGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGGTTCCACTCCATATGGTTAAAGAAATCTGTTTTCATATATTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAACCAGAAAATGTGTTGCTTCAGTCACTGATAAATCCATCCAAAGATCCTAGGAAATCAGGTGCTTCACTCATCCTTCCGAATACCAAGGATAAGGCTGCGTCTAATAATGGGACTCACCAAGACAATAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAAGAAAGTGAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGACGGAAACTTCAGAGGAAGCTGAGGATTATAAAGGACCCGAGCAAGAAGATTGTGGCAATGATGTAAAATCAAGTGTAGAATCTGTTGAAGATAAACCTGATAGTTCTCTGAGTAAAGATGAATCAACAAAGAATTTTGAAAAGGATGCTTCACAAGGAAGTCATAGTCATATGAGTAGCAGCCGTTTGATGAAAAAGAAATTGCTAGCAGCCGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGAAGTGCTTGTTGGACTTACAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGACCATCTGGCATTGATGATGGAGCTTGTTGGGAAGATGCCTCCGAAGATTGCACTAGGGGGACGCTATTCTCGAGAATTTTTCAATACACATGGTGACTTGAGGCACATAAGCAATTTGAGATTCTGGCCAATGGATAAGGTGCTGATGGACAAGTATAATTTCAGTGAGCAAGACACAAAGGACATGGTTGACTTCCTTGCTCCAATACTTGATTTCGTCCCAGAAAAGAGACCAACAGCTGCTCAGTGTCTTAGTCATCCGTGGTTGAATGCAGGTCCCCGTACTCTTCAGCCCTCAATAACATCCGCTCAACCTGATGCCGTCAATGAGGAATTGTCTGAAAGAAGGAAAAGGGAAGCTGCTGAAAAAGAGTCAGTGGAAATTGGTTTGAGAAATATAGCCATTAAAGGAACTTCTGAGCCTCTCAAAGACTCCCAATCTGTAAAATCATCCAAACAGATATAA


Promoter Sequence:
>Vu_12302::LG3:15198485-15200485(-)
CACCTCCACGCACCGCGAGCTCCTTCGTGCAATTAAAGAACTAGCAGCTGCCGCAGATGAGGAGAGAGAACGTTTCTTGCGTCGTAAACACCATTATACAATTGTGTGAAACCCTAATTTGACTGGGAAGGGGACTGCCACGTGGTAATCCCTTATTGGCTGAGTTTGCCACACACTAGTAACTGGACAACTCATTCAGTTTTGATCTGGAGACAATTAGAGATTTTAACGTTGTAAGCAAAAAGTACCAACTTGAACCGTTTTTATAAGGCTTAATACCTCTTTTGGTCCCTCAAAATAGGGGGAATCTTCATAATTGTCCTACCTTTTTTAAAAAGTTAAAAACGGTCCCAACTTTTGAAAAAACTAGTCAAGTTAATCCTTTTTTGTTACGGCGTCAAATTTCTAACGGTGCAGCTCCATCTTGGAGAAAACTTAATTATGTGTCTAGTTTTTGTGATTGTGTCGCACTGAGGGTGAGGGGCAAGACAATCACCACAAGCGCAACACCAGCGCCCGTTTACCCACCTCCAACGCCTGAGGCCGCGCCACCGGGATCTCCCGCGACCGCCAGATCCATAAGACCTTCAACAACATCAAGATCACTATACTATGCGGCTTTGTCACCATCCTCGTCCTCCGCGGCACCATCGGCGTCAATCTCGGCTCCTCCGATTCCGACGTCGTCAACCAGAACCTTATCAAGGAGACCAACTGCATCCTCGCTGAGATTTGATCCGACGTGGACCCCTCCGATCTCGATGACCAACAACCCTTCAACCCCAATGTTATCTTTACCCTCGGTCCCAAAATCAATAATTGGGACCAAGAGCGCCAAAATTGGCTCACTCAAAACCCTCAATACCCTAATTTCATCAGAGGTAAACCTCGCATCTTGCTCCTCACTGCTTCCCCTCCCAAACCCTATGATAACCCTATTGGAGATCATGACCTCTTGAAGTCCATTAAGAAAGAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTATAATTTGGCTCATTTGGATGTTGAACTTACTGGTTACTGGGCAAAGTTCATACGCACTCATAGTTTCCTCCAATTTTTTCCAGTCAAATTATCTGGCGTTTTTTTATTCGCGATGAACTCGCGATTAGGGTTTCTAATTTGGGCTTTCCTGTTCTGCTATTAGTGTTCATCTGGGATTTGGTTTTCGTAGGTTCTCGGTGGCTATGGATGAGGCTCGATTTGGGTTTCTTTGGGTTTATGCGATTTCCTGCAGGTTTCGAAGGAGGAGATTGGTGGAGAAGCTCGCGTTTTTGTTTCTGAGTTTTTTCGAAAGTCTAGCGAAGAAGAAGATGGTGTTTTTTCGGTTTCGTTGCAGCTATACATGGAGGAGGAAAATGTGATCTGGTTGTTAGGAAGATGCTGATAGCCTTAGCGGTGGTTTAAGATGTTGACGGCGGCAACTTCTGGCTCTAACGTTTTTGGAGGTGGAAGATAAAGCTGATGTGGCAAACAATTTTTTTTTTAAATTTAAAATTGACATATTATATTACCTCGGTGTGCCACGCAATCACAAAAGTTTTGGACTGTCATTAAGTTTTCTCTAGGATGGCAGATGCACCGTTAGAAATTTGACGACATAACAAAAAAGGATTAACTTGATCAGTTTTTTCAAAAGTTGAGACCGTTTTTAACTTTTTAAAAAAAGGTAGAAAGATTCTTACATTTCCTCTCTTTCGAGCGACCAAAAGGTATTAAGCCTTTTATAAAATATGGGACTAATGTCTATAAAAGTATAAAATTACTTTGAACATATCTACCGAACTTAAGGACAAAATAGATATTAAACCTAAAATAAATTTTGGTGGTTCCATTGTTTTGAATTTTAAATTTTGAAAATAAGAGTCAGAATTTTTCATAAAAATCGAACTGTTACAAAGTGAAGGGAAGGAGTTAAAAAAAAAAAATTTCATATTTTTTAATTCGTTAATGGCAGTCACAATGATAAT


Gene Sequence:
>Vu_12302(-)
AACTATAGTTCCCTCAGTCACTCTCAAATTCCGGTGGTTTTATTTTCCCGGTAAAGTTCAAAAACCCTAACTCCAATTCGCCTCTCTCTGACTCAAACAAATTGGGATTTGTAACCGAAGCATTTGATGGAGAGGAACGAAAATTACAGTTCAGAGGAGGAATGCATGGAGGATTACAGGCGTGGAGGGTACCATGCCGTTCGAATCGGCGATGCTTTCAACAACGGCCGCTACGTCGTGCAGTCCAAGCTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCTTGGGACACTCTCATTTCGGTACCTCCATTTTTCAACTCCGCTCCTTTGGTTTTCATGTTATAATTGCCCACATTATGCTTTTTTATGTCTTTGGACTTCGATCACTCACTACGTTGAATTGTTAGTTCCTCGTTTTTCGAGAACTCCATTGCGTTTAGTTGCTTCCCTGTGATGTTTTTGGAGTAATGATTATGAGAATGTTACAGATTTTTCCTGTTTCTTGTTTTAGTTGCTAGGGAAGGGTGGGAAATGAGAAGAGACTTTATAGAACCTTGAACGTAGGGAGCTAAATGAAAATTATGTGGCACTATTTGTTAGGAGTCCCACGTCGAGTGACTCTAGGTGAATGAAGCCGTGAAAGGGAAATGGACCATTTGGGTTGGGGTTGGGAAAGGATTCCATGGACTGTTAAAGGAACTGATTATGTTAGAGTGCTAAAATATGGTACTGAAGCCTTTGGGACAGTCTTACTTGTTAGTATAAGATTTACACTCTTAGTTAATCAGAAGTCGCAAGCTTACTAAATTTGACTAGTTATTATTGGATGCCTTTATCAGTGAAAACATGTAAACTGAAATGAAAAAGTGACACAAGTTAACAAAGGAAACATCCACCATGTTTAACTTGTCGCTGTTTGTAAATGTTGAACTTTGGAGTTTGAATCTCTTACTGATAGGAAAGTTTTTTGTTTGCAGCGTTTTGTAGCCCTTAAAATTCAAAAGAGTGCCCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGCCGAGGGGGACCTGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTCAAGCATTCGGGGCCTAATGGACAGCATGTGTGTATGGTTTTTGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGGTTCCACTCCATATGGTTAAAGAAATCTGTTTTCATATATTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAACCAGAAAATGTGTTGCTTCAGTCACTGATAAATCCATCCAAAGATCCTAGGAAATCAGGTGCTTCACTCATCCTTCCGAATACCAAGGATAAGGCTGCGTCTAATAATGGGACTCACCAAGACAATAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAAGAAAGTGAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGACGGAAACTTCAGAGGAAGCTGAGGATTATAAAGGACCCGAGCAAGAAGATTGTGGCAATGATGTAAAATCAAGTGTAGAATCTGTTGAAGATAAACCTGATAGTTCTCTGAGTAAAGATGAATCAACAAAGAATTTTGAAAAGGATGCTTCACAAGGAAGTCATAGTCATATGAGTAGCAGCCGTTTGATGAAAAAGAAATTGCTAGCAGCCGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGAAGTGCTTGTTGGACTTACAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGTAATTGCACCTCTTTTCCACTAAAAACACTATCATGCTTAACTGTCATGAACTTTTTTCTATTGAGTGTTTTTAACAGTGTGGAAGTTCACTTGTGCTTAAGTTTTTTATTTGGTCGCTTTGCTATTACAATTCAATTTTGTATCCTCATGTTTTTGTTACATGTGAGTGAATGCAAAAGTGTATATTTCTTCGCATTTTAAACAAATATCTGTTTTTTTCAAAAGGAAAAAGGCAAATGCTATCTTTTGGAAACAATTATATGCCATGAGAAGGGTGGGTAGAATATACTTCTTTCTCGAAGAAATTTAAAACTTATGTTGCTGGAAGCCTTGCTTAAATTATACAGTTTGTAATTTCTAATTTGACAATAGGAAATATATTATGGGCCCTGGGGCTGGGAGCAATAATACAAAGGACATGCCCATGGCAGTTGAATCAATAATATTATCATGCGTGTGTCTTAATTCTTTTTCATTTATATCAGCCTTCTTTGGAATTCATGTTGTATTTGGAAATTAAGAAAAACATTCATTGGGAACATCGCTAACTTATGTAGGCAGAACATTTATAGTTAAAGAGTGATTTCTTTCCTACTAAGGATATTTCAACTTTGTACTCGTTTTTAACTTCTGAAGGATGAAATGGAGGCTTTAGCTTGCAGTTTGTGAAGTCATGCTACTGGTTAAAATTGGGGCTTCATCAGTCTTCTCTGTTTGGTTCTAATCAATGAAATTTTAAAGCAAATTTTGGGGGAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCATTGAAATCACTGGGACTCTAGGTCCATGTTGTTTTGTGTACACTTTATATATTTTTCCTTGCTTTATACTTGCTGGAAATTTTGACATTAGTGGAAAACCATGTTTGAAAACAGTGATGACTACGTAAAAATGAACTGCAATCTTGTCTTGGTGATATTTAGGCGTTTGTTTTACAGGACCATCTGGCATTGATGATGGAGCTTGTTGGGAAGATGCCTCCGAAGGTATGGATTTTATATCCAAGAATCACTATTCAAATTTAAACTTCGTTTCAGACTATTTTCCAGATCTTCATGTTGTGTTTTCCATTTTACTTTCAATGAGTTTTTCTACTTAAAAGAAATTGAAAAATAGGGTAATTTACTGTATTTCATTCTGAAAATCGGTCAATGTTGATATTTCATCTGTGTGCTGAACCAGAAAAATTTGTATGTCCTTCAGATTGCACTAGGGGGACGCTATTCTCGAGAATTTTTCAATACACATGGTGACTTGAGGCACATAAGCAATTTGAGATTCTGGCCAATGGATAAGGTGCTGATGGACAAGTATAATTTCAGTGAGCAAGACACAAAGGACATGGTTGACTTCCTTGCTCCAATACTTGATTTCGTCCCAGAAAAGAGACCAACAGCTGCTCAGTGTCTTAGTCATCCGTGGTTGAATGCAGGTCCCCGTACTCTTCAGCCCTCAATAACATCCGCTCAACCTGATGCCGTCAATGAGGAATTGTCTGAAAGAAGGAAAAGGGAAGCTGCTGAAAAAGAGTCAGTGGAAATTGGTTTGAGAAATATAGCCATTAAAGGAACTTCTGAGCCTCTCAAAGACTCCCAATCTGTAAAATCATCCAAACAGATATAAATGGGCCTGTATGGGGGTTATATGCAACCCGTGTTGTTTTCATGGATACGTTTTGCTGATCCTTTGAGCTTGATATCCATGGAATTGTTGCATGGGGCATTATATGCAATGCAGGTCAGACAAGAAGCTTCTGCCTTGGGAAGAAGCTCTTCCTGGGACAAACTTTACTGGAATTCTGCTGTACTGTTGTAACCTAACTTATTTCACCTTTACTGGCATTACAGGTGTAGGTGTAGCTTCAAATTCAATGGATCAAGTGTGCTCAGTTATACAAACTACGATTTTTTTTTTGTGCTTGGAACTTCTTCCTATATTAGAGTTGTCTTTCGAAAACGCAACACTTGTTCGGGTGGGGGTTTGTCAAATTGTACATTTTAAACGAGTTGATCCTTGATTTGTCTGCATCAGACTTTGTTGC