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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12281 LG3 14862511 14865522 PREDICTED: serine/threonine-protein kinase D6PKL2
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Annotations  
category   relationship type   keyword
Biological Process   involved in   phototropism, gravitropism, phototropism, gravitropism, protein phosphorylation, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   cytoplasm, nucleus, plasma membrane
Cellular Component   located in   nucleus
Molecular Function   enables   protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, protein binding, ATP binding, protein serine/threonine kinase activity, kinase activity
Pathway   B 09191 Unclassified: metabolism   C 99980 Enzymes with EC numbers
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_12281.1
MDAEDLADDLHSLSFASTTTTTKRSTSFSSETTTVTPSTSSHFLHAPIPNAKPHAPSSDPCASFIHRTRPLALSHLRFTRRLGSGDMSAVYLAEPKEEGGGAVFAAKVMEKEDLARRNKEGRAKTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGIIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPTRNDCHVEGARVASPSSCIIPNCIVPTASCFQPKRKRKKKQKLRSGPAFVAEPMNVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPACSGAMKDLISQLLVKDPGKRLGSLMGASAIKQHSFFDGVNWALLRCTTPPFLPSPNAKAVYDDDHHTSPDIFVDSY*


CDS Sequence:
>Vu_12281.1
ATGGACGCAGAGGATCTAGCCGACGACCTTCACAGTCTCAGCTTCGCTTCCACCACCACCACTACCAAACGCAGCACAAGTTTCAGCTCAGAAACAACCACCGTCACGCCCTCCACCTCCTCCCACTTCCTTCACGCGCCAATCCCGAACGCCAAGCCTCACGCGCCCTCCTCCGACCCCTGCGCCTCTTTCATCCACCGCACGAGGCCCCTCGCCCTCTCCCACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTATTTGGCGGAGCCCAAAGAAGAAGGTGGCGGCGCCGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGCAGAGCGAAGACAGAAAGGGAAATTCTCGAAATGTTGGACCACCCTTTCTTGCCCACGCTGTACGCGTCCATCCACGCGCCCAAATGGCTCTGCTTCCTAACGCCCTTCTGTCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGGTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTATGCATCGGAAGTGTTGTTGGCACTTGAATATCTCCACATGTTGGGGATAATCTACCGCGACCTGAAGCCCGAAAACGTCTTGATAAGATCAGACGGCCACATCATGCTCACCGACTTCGATCTCTCACTAAAATGCGACGATTCCACATCAACGGCCCAGATCATCTCCGACCAAAACCCCCTTCCCACGCGCAACGATTGCCACGTGGAAGGCGCGCGCGTGGCGTCGCCCTCCTCGTGCATAATCCCGAACTGCATAGTCCCGACGGCGTCGTGTTTCCAGCCAAAACGCAAGCGAAAGAAGAAGCAGAAGCTCCGTAGCGGGCCTGCGTTCGTGGCGGAGCCCATGAACGTTCGGTCGATGTCATTCGTCGGGACCCACGAGTACTTGGCACCGGAGATCGTGTCCGGTGAGGGCCACGGTAGTCCGGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTTTACGGCGTGACACCGTTCAAGGGCATGGACCACGAGCTGACCCTGGCGAACATCGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCGGCGTGTTCAGGGGCCATGAAGGACCTTATATCGCAGCTGCTGGTTAAGGACCCCGGCAAGCGGCTAGGGTCCCTGATGGGTGCTTCTGCGATCAAGCAACACTCTTTTTTTGACGGCGTTAATTGGGCGTTGCTGAGGTGTACCACTCCACCCTTTCTTCCCTCACCTAATGCTAAAGCTGTATATGATGATGATCATCACACTTCACCTGACATTTTCGTTGATTCTTATTAA


Promoter Sequence:
>Vu_12281::LG3:14860511-14862511(+)
CTTTCCAGTGTTGTTGGATGACTATATAAATAACATGTATTTTGCTAACTATAAAGTTTGGTAAGAGTGTGATGTTATACATAGCCCAAGTGCTTGAATATTATCTAACGATATACTAGATGACAATACAATCTCGTTTTCTTTGTTATTAGTCATGCAGATTGCAAAGAATTTTATGAATGTCAAAATAATTTATGAACCTTGTATTGTATTGAAGAATAATATATATACATTTTTAAAATAAAAAATTATTTCATTTTACTAAATTACATTTTTTTTACATTTCTAAAATTAATTTTAATAATTAATTTTAATTTTTTTTCTCTTTATAAACCTTTTTACAATTAAATATAACAATAACAATTATCATTTTATATTACTTTAATAACTAAGAGTATTTGGTAATTTTCAATTTTTACAAATTCTACCATAATTCTCACAATATTTCTAAGTTGACTCTCACTTGTCTCAAATAATAATTAATTCATATTCAAATGCATCTACTCACTCTTCCCAAAATCATTCCTACAAAAAAGAAAAGACACCTAAATGTTGTAAGTGAAACTCAAATTAAATCATGTAGTTTTATTTGTTATTTTGTTGCTCCATATACCCTCTATGCTAATTACAAACAACATTCTTTTCTTCCTCGGTAAATTAATATTAGGTTTAATGTCTCAATAGGTCCCTATTTTTGTTCAGAATTTGAAATAGGTCCCTTTATTTTTTGGCGTCTCAATTGGGTCCTTATTTTTGTTAATTTGATGCAAATAAATCCTTTCCGTCAATTTCATCAAACGGCGTTAATGAATGTGTGACGTGGCCTGAGGACAGTATTGACACGTGTAAGGCCACGTCACACATTCATTAACGTCGTTTGATGAAATTGACGGAAAGGATTTATTTGCATCAAATTAACAAAAATAAGGACCCAATTGAGACGCCAACAAATAAAGGGACCTATTTCAAATTCTGAACAAAAATAGGGACCTATTAAGACATTAAACCTTAATATTATGCAATTGCTTAACTGCTTCTCCTTCTTACTCTAGTTAAGAACTATTATCGTATCCTTAAGTTAAAATTATAGGATTTTAAATTATATACAGTTCACTTTAATATATGATTCTTTTATATAAACATGTATAGAGGTTTACTGAAAACATGGACTAAATGTTAGAGAATAGGAAGGTACTTCTTTTTTTAATTACCTTGTACTGAGATTATCTTTTTTAATTTTTATTTTAAGATTTTCTGTTTTATTTTCATAAAATGAATGTATTTTTATTTTATTTTATGTCTACAACTCTAAAATGGCTAAGTTCCTAAAAATGAACAAAATTTAATTTCCATTTTGTTTTGTTTGTAAAAATTTTAAAATTTAAAATTACCATTTTCATTTCTTTAAATTGATTTCGAGGTGAATAAACAACTTCTGATTAGGATTTAAAAAAACATATATTAAGATTATACCACAAACACTACTGACTAAACTTCTGCTAAATAAACACAAAAATCATTAACATATGTTACGCAATAACATGAACCAACAAATAAAATTTGATTTTCTTTTGAAAATGAAAAATAAAAGTATTTTTTTAAATCAAAATTCTAAATCAATGATTTAAAATAAAATTAGAAACGTATTTAAACTTTTAAAGGAGACATTTCTACAAGGAGAATACACTGTCATAATAATATCTGAAGTAAAAAGAAAAAAAATTTGATATTTGAGAAATTTATTTTGACTTTTTTCAAAATTTAGGTATTTTTGTTATAATGTTTGAAGGTGGGCCAAGCCCAGATTCTCGGCCCAACCCTTTCGAGATAGAAAGCCGCGTGTGGCTCTGGAAAAAAAAAAGGAAAGGATCTAACCGACAATTACCCTCTTTCTCTGATCACAACCTCTCTCTCTCTCTCACACACGCACACTCACGTACACTTCAACTTCGTCTTCTTCTTCCATTCTCATCTTCATTTCTATTCCCAAACACAAACCA


Gene Sequence:
>Vu_12281(+)
ATGGACGCAGAGGATCTAGCCGACGACCTTCACAGTCTCAGCTTCGCTTCCACCACCACCACTACCAAACGCAGCACAAGTTTCAGCTCAGAAACAACCACCGTCACGCCCTCCACCTCCTCCCACTTCCTTCACGCGCCAATCCCGAACGCCAAGCCTCACGCGCCCTCCTCCGACCCCTGCGCCTCTTTCATCCACCGCACGAGGCCCCTCGCCCTCTCCCACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTATTTGGCGGAGCCCAAAGAAGAAGGTGGCGGCGCCGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGCAGAGCGAAGACAGAAAGGGAAATTCTCGAAATGTTGGACCACCCTTTCTTGCCCACGCTGTACGCGTCCATCCACGCGCCCAAATGGCTCTGCTTCCTAACGCCCTTCTGTCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGGTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTGCGCCCGCCGTTTCCTTCCAGTGAAATCATTGCAATCTCTGTTTATTTTTTTGGTTTTTTGTTCTGGAGGGAAGAATCCTCGGGTTAAAATATTCATTCACCAATCATATCAATTAATAGTTATAATATTATTTAATATAAATTATAATTCTAAATTCTAAATACAATTAAAGTATTATTATGGGTTTCCACCTTCAATTAAGCAAAATTACGTGCTTTTCCTAAAAGGCCACCACATTTGAAAATGGTAGGAAGCTTTCAGGTGAAATTAGAATTTTTCTTTCCCAATCGACACACAAGGAATTAACACGGAATTAGGGAATTGATTATGCATTTTAATTTTTAATCTAGTGTTTTTTTCATTTATTAAAAATATTAAAGTCTCACTTTTACAACTTAACCAACCAAACCAAACAGTTATTACAAAAACTGTTTTGTTAAGAAGTGTGGATTAATTTTAAACAAAGAACACTTAGAGTAATATTAGAGTAGGTTTAGGAAATTAAGAATGTGATGATGACGACGTTTTGGAGAAGTGATTTGAAAATGGCGGCACGTGATGGTGTGATTGCCTATGCATTCTATGTAAAATTACTTTCAAAGTCAAAACGACAAAGCACGCTGGTAGTTCAAATTTTTTGTCATAAACTTTGTGGTACCCATAAGGTGCGCATGATCACCCTTCGAAGTCGTGGATAAATTTTACTCCATCTTTTATTTTCTTAATGTAAATTTTACAGGTTTGTGGGGACTACGCAGAGTTTTTTAACCTGAAAAAGTTCATAGCTTTTTTCTTACGGGAGAATCTTCCCCTGTTGACGAATCTTCGTGCTTTTTTCTCTATCTAGGGGATAAGATAAAACATTTTAAACTTGATTCATAATTTCTGCGGGATTTCTGCGTTTTATTTCTTAAAATTAGTGAACTGATTGAGAGCAAAATCTTGCAGTGGTCCCTGTTATGGAAATAAATCCCCTTGGCCAGGGGATATGGGATTTTCCTGATTAAATACTATGCAGAGTATAATTAAATAATTAATTAATTAATTAATCAATGAATTAGTTTGTTAATCTTTGTGTGATGTAATGGAATTTGCTTTTTGAATGTTCCCTCATATGTTCCCATATGGTGAGATAAAGAAAAAGAAAAAAAAATGATGGTAACAGGATGTCTGTTAGGCAAGGATTCAAAAGATTCCAATGCATGTCAAAATGTTTCTTTCATTTTCTTCGTTCTTCCTTCTCTGCTTTTGATTGAGCAGGCTTTTACGTGTTAGAAAACAGCACAGCATAGATCAATGGAAACAAAGCTGAAACTTTCAGAGACATGTTCAACTACCCCTGATTTTTATTGTGGGTGAAATTACAAGAAAATGTTTCCTTTGCATGAAGAGTCACTTTACTAACTGCTTTTGTTCTCTTGTCATTATGTGCACGTCTCCCTCTCACATGAAACATTAAGACTTTTTTTCTTAAACATGCATATGGTTCTGTCGTTGACTTCTCTTATTTTCTTCCATTTGCATGGAGATTATCGATGTTGTCCCAAAAATGTCGCACAACACATGGCAAGTTGAAAACCAAGCCACATTTCCTGTCTTGCAAACAAACAAAAGTTGTGATTAGTCATTTTAACCAACCTTGTTCAATAATTATGGTGTTAATCACAGGTTCTATGCATCGGAAGTGTTGTTGGCACTTGAATATCTCCACATGTTGGGGATAATCTACCGCGACCTGAAGCCCGAAAACGTCTTGATAAGATCAGACGGCCACATCATGCTCACCGACTTCGATCTCTCACTAAAATGCGACGATTCCACATCAACGGCCCAGATCATCTCCGACCAAAACCCCCTTCCCACGCGCAACGATTGCCACGTGGAAGGCGCGCGCGTGGCGTCGCCCTCCTCGTGCATAATCCCGAACTGCATAGTCCCGACGGCGTCGTGTTTCCAGCCAAAACGCAAGCGAAAGAAGAAGCAGAAGCTCCGTAGCGGGCCTGCGTTCGTGGCGGAGCCCATGAACGTTCGGTCGATGTCATTCGTCGGGACCCACGAGTACTTGGCACCGGAGATCGTGTCCGGTGAGGGCCACGGTAGTCCGGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTTTACGGCGTGACACCGTTCAAGGGCATGGACCACGAGCTGACCCTGGCGAACATCGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCGGCGTGTTCAGGGGCCATGAAGGACCTTATATCGCAGCTGCTGGTTAAGGACCCCGGCAAGCGGCTAGGGTCCCTGATGGGTGCTTCTGCGATCAAGCAACACTCTTTTTTTGACGGCGTTAATTGGGCGTTGCTGAGGTGTACCACTCCACCCTTTCTTCCCTCACCTAATGCTAAAGCTGTATATGATGATGATCATCACACTTCACCTGACATTTTCGTTGATTCTTATTAA

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