Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12243 LG3 14379721 14382160 PREDICTED: myb-related protein 2-like isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   mitochondrion, mitochondrion, mitochondrion, mitochondrion, mitochondrion
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/A 14379726 3_prime_UTR_variant
G/C 14379806 3_prime_UTR_variant
T/A 14380218 missense_variant p.Lys295Met
C/A 14380643 splice_acceptor_variant&intron_variant
G/C 14380667 intron_variant
C/G 14380751 intron_variant
T/C 14380753 intron_variant
A/T 14380869 splice_region_variant&intron_variant
C/T 14380889 intron_variant
A/G 14380905 intron_variant
T/A 14380967 splice_region_variant&intron_variant
A/C 14380999 missense_variant p.Leu121Val
G/T 14381134 intron_variant
G/A 14381454 intron_variant
A/G 14381491 intron_variant
T/C 14381573 missense_variant p.Glu65Gly
G/A 14381767 missense_variant p.Leu38Phe
G/A 14381772 missense_variant p.Pro36Leu
A/G 14381785 synonymous_variant p.Leu32Leu
G/A 14381796 missense_variant p.Ala28Val
A/C 14381816 missense_variant p.Ser21Arg
G/T 14381820 missense_variant p.Ser20Tyr
C/T 14381826 missense_variant p.Gly18Asp
C/T 14381827 missense_variant p.Gly18Ser
C/T 14381839 missense_variant p.Gly14Arg
T/C 14381854 missense_variant p.Met9Val
G/T 14381865 missense_variant p.Ser5Tyr
G/T 14381868 missense_variant p.Pro4His
G/A 14381870 synonymous_variant p.Ile3Ile
G/A 14381875 missense_variant p.Pro2Ser
C/A 14381876 start_lost p.Met1?
C/T 14381880 5_prime_UTR_variant
C/A 14381905 5_prime_UTR_premature_start_codon_gain_variant
A/T,C 14381909 5_prime_UTR_variant
G/C 14381911 5_prime_UTR_variant
G/C 14381944 intron_variant
G/C 14381945 intron_variant
C/*,T 14381968 intron_variant
C/T,* 14381983 intron_variant
C/T 14381987 intron_variant
T/C 14381990 intron_variant
A/G,T 14381998 intron_variant
G/A 14382005 intron_variant
C/T 14382023 5_prime_UTR_variant
G/A 14382032 5_prime_UTR_variant
T/A 14382035 5_prime_UTR_variant
T/G 14382047 5_prime_UTR_variant
G/T 14382057 5_prime_UTR_variant
G/C 14382062 5_prime_UTR_variant
A/C 14382083 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12243.1
MPIPSERHMFLHTGNGSGDSSLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMEISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVQRRLNEQLEVQRLLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLELKELQGFSPHQTQTNQPNDCSMDSCLTSCEVSQKEQEIQNGGMSLRPFNVHTFMERKELIEGPNLNNLPSTDLKWCDPVKNTFLTPLSRRSPSNLSMSIGLEGETENGSTIRKESVKSVAEKVSQDYGLPSYFAAPNLDLTTEDKNNRSCKELDLNGFSWN*


CDS Sequence:
>Vu_12243.1
ATGCCAATCCCTTCTGAGAGACACATGTTCCTTCACACTGGAAATGGATCTGGTGATTCTAGTCTTGTTCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCTGATCTTCATGCCAGGTTTATAGAAGCTGTGCAGCAGTTAGGGGGAGCAGACAAGGCAACACCCAAAACGGTAATGAAACTCATGGAGATTTCAGGGCTTACTTTGTATCATCTGAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAGTCTGCATGGACAAAGTAATAACGTGACACACAAAATCTCCATAAACCCGGGTGCAGCAACAGATGAAAGACTCAGAGAAAACAATGGAACTCATGTGAACAATTTAAACCTTGCCCCTCAGTCGAATAACAAAGATTTACACATCAGTGAGGCACTGCAGATGCAAATAGAGGTTCAAAGAAGACTAAACGAGCAACTTGAGGTGCAAAGACTTCTGCAGCTCCGGATAGAGGCTCAAGGAAAATACCTTCAAGCTGTGCTGGAGAAGGCTCAGGAAACACTTGGTAGACAAAATCTGGGAGTAGTAGGACTTGAAGCTGCAAAACTTCAACTTTCAGATCTAGTGTCAAAAGTGTCCTCTCAGTGTCTGAACTCAGCATTTTTAGAGCTGAAGGAGTTACAAGGATTTAGCCCTCACCAAACACAAACCAACCAGCCAAACGACTGTTCTATGGACAGTTGCCTCACATCCTGTGAGGTGTCACAGAAAGAGCAAGAGATACAAAACGGAGGGATGAGCCTAAGACCCTTCAATGTCCACACATTCATGGAACGAAAGGAGCTCATAGAGGGTCCTAATCTCAACAACCTACCAAGCACTGACCTCAAATGGTGTGATCCAGTGAAGAACACCTTCCTCACCCCATTGAGCAGAAGAAGTCCAAGCAACTTGTCTATGAGCATTGGACTTGAAGGAGAAACTGAGAATGGAAGCACCATTAGGAAAGAATCAGTTAAATCAGTGGCTGAGAAAGTTTCTCAAGATTATGGACTGCCTTCATACTTTGCTGCACCAAACCTGGACCTAACCACTGAAGACAAGAACAATAGGAGTTGTAAAGAACTGGACTTGAATGGATTCAGTTGGAACTAA


Promoter Sequence:
>Vu_12243::LG3:14382160-14384160(-)
GAATAAATTATGTTGTGAAAATTGAAGATAGAAACGACATTTGGACAAATAGAGTATTTTGTTGATTGAATGTTTGTCAAATTTGGAGACAAAATGTTTGCAGTGCAGTAACAAAAATTTGGATCTCTACCACGACCATAAGAGGAATTACATTGGTTTTGTAACTCAAACTTTACAACTACACATGAAGAATGAAGGCCAGGAAGAAGTTAACCTAGTTACATGAAAGGGACAAAAAACATGTCATTATATATGGTTTTAACAAAAACGTTGTCGAGAACAAAAAACACGATAAAAAGTTGTGTGATTAAGTTAACCTATAATCTCAAGTTGAAAGTTTAGATATATCTATACTAAATATCAACATTGAAAACATATATACATTTAACATGAACGTGAACTGCATGTGATTATTTCCTATAATCTCTTCACTAGCAGCTAACAATCAATCATTTTCTACCACAACATTTTCATAGTACATCATTTAGGTCTAGATACACGATTCTTCACAAGCATGATCATAATGAATAAGTGAAAGTTCGACACGGATAAGAATTATAACCATTCAGAAAATTACAGAGCTGGCACAAGAATCTGCTTCATTAACCAAGATACAAGTCAAGGGTAAAGTTAAGTGGTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATAATATGCTGCATTTAACCAAATGTAAGTATAGAAGCAAGTACACTTGCTTTCACTTTTAATTAGGTCCCGCTTTTATGATTCTAGAGGATGGGAGTCGATTGAATTTTAGTGCCAAAGAAAGAATGAAAAAATTTGGGTCCACCTTCCTCCTATTTCAATTTTTCTGACTTGTGGGGGCTGAATAAGTTCCAAACTTATGGATGCAGACAAAACAGAACGTATTCTTATTCCATTCCTTACCTCCAAACAGTCCCATGCAAGCATCTGAACTGTTTTTTTTATATACCTTTTCTTCTATTTCAAGGTGCTCTAGTCAATGAGTTAATCCTTCTTATTCATAACTTCTTCATGCATGTACAACTCATTGAGAAGCCCCTTGTCTTTTATATATATGTATGTACTTTAACATGCATAGCATTCAACAAAATCATATCCATCATGTTAAAAATATTGTTTCACGTTGAGGACTGCTATAATGATCACAAGAAGAGCATTGTTTAGGCCTTTAGCTTGCAAGAATCTTCCACTACAGGAAAATGTATATAATGGATGAGCTTTGGCAGTTCCAAGTAGAGAGGAATATAAGATTCCCCAGAACCAAGTCAGGAAAAATAAAACAAAAATAAAATCCTATTTTCAAATTTGGGAATATGATTCCCACTTTTGCCAGACCAGCGAATATGAATGCACATTTGGTTAAAATTTGAAGGATCAATTCCAGAATCTAATGCAGTTAGGAACTAGATATTTACATATTAATTTTTCAACATTATAGTTTCAATACAGATATTTGACAAATTTTTAAGTGTTTGTGTGTGTATGCTGGAAACATATCTATAAAACTGAGGTAGAAAAGCCATAAAATCAGACCTTTAATAGTATTTTCATCAGTTTTAATTTCACTTATCCATTCTAGTTATACAGGTAAAATTCACTTACAAGATTATATATATAAGTATAAAGTGTGTGTGTGTGCACTAATTAAGAGGGACTCAAATGGGTGCAACAACAAAAATAAAACAAGGAACTCAAATGGAATGTTTTGCACTGCCTTAGAATAGAAAGTGAAACTAAAGGGGTCCACAAGCATATATAACACAAGTGAAGAGAAAAAGTAGGAAAAGGAAGGAGTCTATTTGTCAGGTAACCATGCATAAAGGATTGAGTTCTGTTTTCCATTGGTTCTACCAAAGATTCCATGTGTTGTTCACCTCAGCTCTCATATATAACTACCTCTCTAAGGAGGCTTTGCACTGAAGAGATATGTGCAGTGAAGAAACAAGCTACAAAAGCTCCACAAG


Gene Sequence:
>Vu_12243(-)
TTGACTGAGAGATAGAAAGAGGAGGTTCACTTATATATATACATATATATTAGTATCAAGTCTTATACTACTTGCAATTAGAGCATTATCGACTTTCACCTTTCAGAGGTAGCAAAGTGATTCAGAAACAGAAGTCTGATAGGTAAAGGCACAATCAGGTGATTATATACATTGTTTGTTTCTATATGTTGTGAACTCATGGTGCTTATAAAGTGCCTTTTGCAGGTTGAATACTCTCCTCATCTGCAACATCAAGGAAAGAACATTCATTCTTCTTCCAGAATGCCAATCCCTTCTGAGAGACACATGTTCCTTCACACTGGAAATGGATCTGGTGATTCTAGTCTTGTTCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCTGATCTTCATGCCAGGTTTATAGAAGCTGTGCAGCAGTTAGGGGGAGCAGACAGTGAGTATTTAAAACATATATTTGTTGATCATCAAATCTTGAAGAGGATAGAGAACTTTTTTACTTCTTTTTTATTAGTTCAATGATTCCAAGAGCAAACTTTTTTCTGCAGAGGCAACACCCAAAACGGTAATGAAACTCATGGAGATTTCAGGGCTTACTTTGTATCATCTGAAGAGCCATCTTCAGGTAAAAATCATTAGTTTTCTGCATAATGTTTTTGAGTGTTGCTCTCAACTATAGAAAAATCTTGTTTTTGATGCTCAAAATATGTTTACTAAAATGAAAAGGAGTTGGACCCAGCATATATTAGTCTGCATGCTTCGTACATAATATACTTCTGCTAAATTATATTCCATATATAACTGATAAATTCTGGTTTCTTATTCATCGTATAGATCTGCTAAATTTTTAAGCAAAGATATGCTGATGTATACACAACTAAGAACCAAGCATAACTTTCTGACCATGATTTCAATGGTGTAATTACTGATCCGTTTCTTTTCCCCACCAGAAGTACAGATTGAGCAAGAGTCTGCATGGACAAAGTAATAACGTGACACACAAAATCTGTAAGACAACATCTTCTTTATTATCTCTAAATCTATAATGAATCGCAAAACTTTGTTTCTGAAGAATAAACTGGTTTCTCAGCCATAAACCCGGGTGCAGCAACAGATGAAAGACTCAGAGAAAACAATGGAACTCATGTGAACAATTTAAACCTTGCCCCTCAGTCGAATAACAAGTAAGAAACTTCCACTTTTCAGTTTCCACACATGATTTCTTGTAGTGTGAACATTCTAACTTCTATCACTAAAGGTTTTAAGCTAACACTCAGTGACCTTGTGGCAGAGATTTACACATCAGTGAGGCACTGCAGATGCAAATAGAGGTTCAAAGAAGACTAAACGAGCAACTTGAGGTGTGTTAAACCAACTTACCATTACCATACATGTATTTTCAAGCTGTAGAGTTGATAATTATCAAAAGGTTTCAATTAATTTTCACATAAAGTGTGATTAACTATTTCTTCATAAATTCTAATTAACAAAAACCCATCTGAACTCATCTAGGTGCAAAGACTTCTGCAGCTCCGGATAGAGGCTCAAGGAAAATACCTTCAAGCTGTGCTGGAGAAGGCTCAGGAAACACTTGGTAGACAAAATCTGGGAGTAGTAGGACTTGAAGCTGCAAAACTTCAACTTTCAGATCTAGTGTCAAAAGTGTCCTCTCAGTGTCTGAACTCAGCATTTTTAGAGCTGAAGGAGTTACAAGGATTTAGCCCTCACCAAACACAAACCAACCAGCCAAACGACTGTTCTATGGACAGTTGCCTCACATCCTGTGAGGTGTCACAGAAAGAGCAAGAGATACAAAACGGAGGGATGAGCCTAAGACCCTTCAATGTCCACACATTCATGGAACGAAAGGAGCTCATAGAGGGTCCTAATCTCAACAACCTACCAAGCACTGACCTCAAATGGTGTGATCCAGTGAAGAACACCTTCCTCACCCCATTGAGCAGAAGAAGTCCAAGCAACTTGTCTATGAGCATTGGACTTGAAGGAGAAACTGAGAATGGAAGCACCATTAGGAAAGAATCAGTTAAATCAGTGGCTGAGAAAGTTTCTCAAGATTATGGACTGCCTTCATACTTTGCTGCACCAAACCTGGACCTAACCACTGAAGACAAGAACAATAGGAGTTGTAAAGAACTGGACTTGAATGGATTCAGTTGGAACTAAGAGAATGGAAAATGGAAGCAAGGAAACTCCAATTTCTGGCAGGAACAATGTAACAGATCCTGTAAACAATTTAATCTGTCAGCTGATGTTTCTTTCAGTTTAAAGGGTCATTGGCCGGATATGAATTAATTTTAGCAGAATGCAAACTTGCATCTGACAAAAATCTAGCATAAATTTGTAAGCAGTAATCGTAATTGACATATAAAGTATGGTTTTATTCTATATAAGCTTATTCAAAGTTTTAGACGTC