Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12221 LG3 14165379 14166303 PREDICTED: NAC domain-containing protein 90-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA binding, protein binding
SNP Position Effect Amino acid change
C/T 14165548 missense_variant p.Arg72His
C/G 14165564 missense_variant p.Glu67Gln
C/A 14165857 intron_variant
T/A 14166214 synonymous_variant p.Leu30Leu
A/T 14166215 missense_variant p.Leu30Gln
C/T 14166217 synonymous_variant p.Lys29Lys
G/T 14166257 missense_variant p.Pro16Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12221.1
MPNIMEDHPPGFRFFPTEEELVGFYLHNKLEASRNNAAALRCEFSLYRVYIVSGSFRAFDRRPSEAEGAESRLHQSSSQVSHLLQLSQLSELSQLPEAGDSSSRNWNEEQLQEPSWELEWEHFNWMV*


CDS Sequence:
>Vu_12221.1
ATGCCAAACATCATGGAAGATCATCCACCTGGTTTTCGCTTTTTCCCGACAGAAGAAGAGCTTGTTGGCTTCTACCTACACAACAAGCTAGAAGCTTCAAGAAATAATGCTGCTGCTTTGAGATGCGAGTTCAGCTTATATCGGGTGTATATCGTATCTGGAAGCTTTCGAGCATTTGATCGCCGTCCATCAGAGGCAGAAGGAGCAGAGTCACGTCTTCATCAAAGTTCATCTCAAGTTTCTCACTTGCTCCAACTTTCTCAGCTTTCTGAGCTTTCTCAGCTCCCAGAAGCTGGAGATTCAAGTAGCAGAAATTGGAACGAGGAACAGCTTCAAGAACCGTCATGGGAATTGGAATGGGAACACTTCAATTGGATGGTCTAA


Promoter Sequence:
>Vu_12221::LG3:14166303-14168303(-)
AACGTTTCATTTTTTTTAGTTTTATACTATTAAAATGAGATGTTAGAAATTTACTTTCCATTTTTTAATTTTAATTATAAAATCATCATGTTAATTCCAAATAACTATTCGTAACATTCTTACAAATGGATATTGAATAAAACAGTTAAACATATCCGGAATATTTTTACTGAATCACAAAGTAAAAAAAAAACATACATAAGCACACACACAACATGTTTATGTGAAAATAGAGACTATTATATTTTCAAGATTCATATTTATATTGCAAGTGTGACGCCCGGGCACTGACGAGGGCGGGGAGTGATCGCCGGTGCAAAGCGTCACGGACAATGAGCGGCTCCTGGCAGGCTTTCAGTGGAAGGGGTACATGGACGAATCGGACATACACCGGAATGAGAGGGATCTGGAGACTGTATAGGTATGGGACTATACAATTGAAAGATAGCTTAAAGGAATTGATTTGGCTACTCATATAACCAAAATGCATTTGTTTTTCGGTAGCCTGACCCATAAGAACTTCATGGTTAAGCGTGCTTAGCCTGGAGCAATTTAGGGATAGGTGACCTTCTAGGAAGTTTTCCCAGAAAGTGTGCGAGTGAGGACAAATTTCTTTGTCCTCTACGCTGCTTAATTTCCTGGAATTAGTCACCTCAATAATCTTCGATGGTTCTATGGGTATCCAAAATATGAACGAGATGGATATTTATTGTCCCAACCATTCCTGTTAGTCCCAATCTCGATAAGCCATAGATATAGATAGATACAAAGTTTTCGTGTCCTTGATTCCCAAGCGTAGTGCTTCTTTCCCAATGTTGCCTATCAGTACTAGTAATTTGGGGTTGACCTAACCCCATAATTATAGGTATAACCTTTCGCTTAATACTAGAAACCTAAAATTCAAGCATATAAGGCTTCATTAATCGAGGATACCTGGAGCAATTTAGGGATGGGTGACCTTCTGGGAAGTTTTCGCGGAAAGTGTGCGAGTGAGGACAAAGCACATAAATATAAATAATGAAATAAGATATAAAAATAACATAGATGATGAATAAATTATTTATATCCATAATGAAATAAGATATAAAAATAATAATTATTATTATTACGCTTACTTATATAATTGGATTTCATGTGTAATAAAAAACAATAAATTTTCGTAGATTTAGATACAAACAATTATTTTATCAGATACACCATACTTAAATAAAATTTTCTCAGCACCCTTTATTTAACAGTAATGTCATTTTAAGTGATTAGTCTAATTTACGATGTAAAGTTTCAATAAGTGGACTTTGAAAAAAACAGAGATTAATGAAATTAAAAAAATATTGTTTTTTAATGTTTTTCAATTCACATGACTCGGGTGAAATATTAAGTGATTCCTATTTTAAAACAATTATTATACAATAAAAACATTTATTTTATGAAACGAAATAAAATGGGAATAATAAACTACATTATTTCGTGGAGAGGAAAAGAAAACATAACATATCTGACTTGTTCCACCAGTGAGATTGCCCTGCATAGATGATAGATCCGCAGAAGAAATGTCCATTAACATGTTGACAAAAAATCTCTGCAAAATTAGGGTTGGAAAGAATTAATTAGGTTTGGTTACACAAAAACCTAGCTGACTTAAACATAAAATGATTGCATTTGCCGATACCTAGAACGAGTGAGAAATTGAAAGAAGCAGACTTTTTTTTTGTCTCTCTGTCATATGGTTTTGGAGAGAGGAGGACTTGTTCAAAATAACATTTTATTGGATATTATAGGTATGTAGCCATCATAAGGTATCCAACATGGATAACATAGACGATTTCTCCTTCCCATAACCGCGTAAAAGTTTCCATCAAAACTTGCCAATTTTCTAAATTTACACGCTGAATCTCTCTGCCCCACCACCCTACCTTTTTCTCCTTCAATCTTCTCCTTCGTTTATACATATATATTCACCTCATTCCAATGTGCACAAAAGTAAAACAGACCTCAAAATT


Gene Sequence:
>Vu_12221(-)
ATGCCAAACATCATGGAAGATCATCCACCTGGTTTTCGCTTTTTCCCGACAGAAGAAGAGCTTGTTGGCTTCTACCTACACAACAAGCTAGAAGCTTCAAGAAATAATGCTGCTGCTGTTACTGCTGCCATAGATAGAGTTATTCCAGTTGTTGATATCAATGCCCTGGAACCATGGAACCTCCCAAGTATGTGCTTCATAAATAAATAAATAAATAAATAAATAAGCAAACTTTTGTGCATATGATTCACTCGTTTTTGTAAAATAATTGTTTGCAGCACTTGCGGGGGAGCTTTGCCGTGGGGATACAGAGCAATGGTTTTTCTTTTCGCCTGGGCAAGAGAGAGAAGCCAGAGGAGGGAGACCTAGCAGAACCACAGCTTCTGGGTACTGGAAAGCTACTGGTTCACCTGGCTATGTTTATTCTTCTGATAACAGAGTTATTGGGGTGAAGAAATCCATGGTGTTCTACAAAGGAAAAGCTCCTATGGGAAGAAAAACCAAATGGAAGATGAACGAGTACAGAGCCATCTCCAACCCCGTCACCCCTCAGGTACACACACAATTGCAAATTCTTCGTCTCTTTCTCTTCCTAACATCACATTCACATGTTTAATTTTGATGTTCGTTATCGTAATCTTTGATGTATGGCGTGTAGTTGAGATGCGAGTTCAGCTTATATCGGGTGTATATCGTATCTGGAAGCTTTCGAGCATTTGATCGCCGTCCATCAGAGGCAGAAGGAGCAGAGTCACGTCTTCATCAAAGTTCATCTCAAGTTTCTCACTTGCTCCAACTTTCTCAGCTTTCTGAGCTTTCTCAGCTCCCAGAAGCTGGAGATTCAAGTAGCAGAAATTGGAACGAGGAACAGCTTCAAGAACCGTCATGGGAATTGGAATGGGAACACTTCAATTGGATGGTCTAA