Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12199 LG3 13957262 13958875 "PREDICTED: BES1/BZR1 homolog protein 2-like, partial "
 Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
C/T 13957284 missense_variant p.Pro8Leu
G/C 13957384 synonymous_variant p.Val41Val
A/C 13957538 synonymous_variant p.Pro57Pro
C/T 13957690 missense_variant p.Thr108Ile
C/T 13957775 synonymous_variant p.Asn136Asn
G/A 13957807 missense_variant p.Arg147Gln
T/A 13957965 missense_variant p.Ser200Thr
A/G 13957996 missense_variant p.Tyr210Cys
T/C 13958008 missense_variant p.Val214Ala
T/A 13958018 synonymous_variant p.Pro217Pro
G/A 13958046 missense_variant p.Ala227Thr
G/A 13958057 synonymous_variant p.Gln230Gln
T/C 13958089 missense_variant p.Phe241Ser
C/T 13958095 missense_variant p.Ala243Val
A/G 13958096 synonymous_variant p.Ala243Ala
G/A 13958118 missense_variant p.Asp251Asn
T/C 13958138 synonymous_variant p.Gly257Gly
G/A 13958156 synonymous_variant p.Glu263Glu
G/A 13958164 missense_variant p.Arg266Lys
T/C 13958167 missense_variant p.Ile267Thr
C/T 13958171 synonymous_variant p.His268His
G/A 13958172 missense_variant&splice_region_variant p.Glu269Lys
G/A 13958179 splice_region_variant&intron_variant
G/T 13958193 upstream_gene_variant
T/C 13958204 upstream_gene_variant
A/G 13958206 upstream_gene_variant
C/T,G 13958210 upstream_gene_variant
A/G 13958219 upstream_gene_variant
A/G 13958232 upstream_gene_variant
T/C 13958251 upstream_gene_variant
T/C,A 13958260 upstream_gene_variant
C/A 13958274 upstream_gene_variant
A/G 13958278 upstream_gene_variant
A/G 13958307 splice_acceptor_variant&intron_variant
G/A 13958309 missense_variant&splice_region_variant p.Val270Ile
C/T 13958315 missense_variant p.Pro272Ser
G/A 13958318 missense_variant p.Asp273Asn
T/C,* 13958331 missense_variant p.Leu277Pro
T/G,* 13958335 missense_variant p.Ile278Met
C/G 13958343 missense_variant p.Pro281Arg
C/T 13958353 synonymous_variant p.Ile284Ile
C/T 13958356 synonymous_variant p.Ala285Ala
G/A 13958390 missense_variant p.Gly297Arg
G/T 13958393 stop_gained p.Gly298*
A/G,T 13958400 missense_variant p.Gln300Arg
T/C 13958446 synonymous_variant p.Asp315Asp
T/A 13958505 missense_variant p.Leu335His
G/A 13958513 missense_variant p.Ala338Thr
C/A 13958514 missense_variant p.Ala338Glu
G/A 13958530 synonymous_variant p.Leu343Leu
T/C 13958584 splice_region_variant&synonymous_variant p.Leu361Leu
G/T 13958633 upstream_gene_variant
A/C 13958657 upstream_gene_variant
T/A 13958658 upstream_gene_variant
C/T 13958669 splice_region_variant&intron_variant
G/A 13958676 missense_variant&splice_region_variant p.Arg362Gln
C/G 13958695 synonymous_variant p.Ala368Ala
A/G 13958705 missense_variant p.Lys372Glu
G/A 13958714 missense_variant p.Ala375Thr
A/G,* 13958717 missense_variant p.Lys376Glu
C/T,* 13958728 synonymous_variant p.Gly379Gly
T/G,* 13958733 missense_variant p.Val381Gly
C/T,* 13958740 synonymous_variant p.Ser383Ser
C/T 13958748 missense_variant p.Ala386Val
A/G 13958749 synonymous_variant p.Ala386Ala
G/A 13958755 synonymous_variant p.Thr388Thr
G/T 13958761 missense_variant p.Leu390Phe
C/T 13958766 missense_variant p.Ala392Val
C/A 13958787 missense_variant p.Thr399Asn
G/A 13958789 missense_variant p.Ala400Thr
C/A 13958793 missense_variant p.Thr401Lys
A/T 13958799 missense_variant p.Lys403Met
A/G 13958801 missense_variant p.Lys404Glu
C/T 13958814 missense_variant p.Ser408Leu
G/A 13958828 missense_variant p.Val413Met
T/C 13958829 missense_variant p.Val413Ala
G/A,* 13958832 missense_variant p.Gly414Glu
A/G 13958839 synonymous_variant p.Ala416Ala
G/T 13958847 missense_variant p.Arg419Ile
A/T 13958848 missense_variant p.Arg419Ser
C/T 13958852 missense_variant p.Pro421Ser
G/A 13958854 synonymous_variant p.Pro421Pro
A/G 13958855 missense_variant p.Thr422Ala
G/A 13958860 synonymous_variant p.Ser423Ser
T/C 13958871 missense_variant p.Val427Ala
G/A 13958872 synonymous_variant p.Val427Val
T/A 13958873 stop_lost&splice_region_variant p.Ter428Argext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12199.1
MIPLPVYPIQQSLHQKPSAYQKDKDSSISLKYAIKTEHLSVIVEEDGTTYKKGCKRPTGSEIGGTPPNTSVCSSIQPSPQSSSFPSPVPSYHASPTSSSFPIPTCIDTNPSSFLIPFIRNITSIPANLPPLRISNNVPVTPPLSSPRTSKRKADFDFLSNASFSHPLFATSAPSSPSCRRHVATSTILECDESDTSTIDSTSSRWVSFHYQTPVGPPSPTFNLMKPAMHQIAPQEGVQWGFVAEIGRGVSDFEFENGRVKPWEGERIHEVEPDVGDLILEPVVIALHLEVEDLRIAGGSQGNKARVEELENTVADVGELGLDLRSVVADDGDVILVVAALFLLLDRGDDAPRDTARSDHVLRSGEQCAKDMKAAAKGGGGVGSINAETSLEAARYTTLTATKKKAPWSLEAAVGAAVERAPTSLEAV*


CDS Sequence:
>Vu_12199.1
ATGATTCCTCTCCCAGTGTATCCAATTCAGCAATCGCTTCATCAAAAGCCTAGTGCATATCAAAAGGATAAAGATTCTAGCATTAGTTTGAAATATGCCATCAAAACAGAACATCTCAGTGTGATCGTGGAAGAAGATGGCACTACCTACAAAAAGGGATGCAAGAGACCAACAGGAAGTGAGATTGGAGGCACTCCACCCAACACAAGTGTGTGTTCCTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCATCCCCACTTGCATTGACACAAACCCCTCTTCCTTTCTCATCCCATTCATCCGTAACATAACTTCAATTCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAACGTCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTTCCTCTCCAACGCTTCCTTCAGCCACCCTCTTTTCGCCACCTCCGCCCCCTCTAGTCCCTCGTGCCGCCGCCACGTTGCGACTTCCACCATCCTCGAGTGCGACGAGTCCGACACTTCCACCATCGACTCTACCTCCAGTCGTTGGGTTAGTTTTCACTATCAGACCCCCGTCGGTCCCCCTTCCCCTACTTTCAACCTCATGAAACCCGCTATGCACCAGATTGCTCCTCAGGAGGGCGTACAGTGGGGTTTCGTTGCAGAGATAGGCAGAGGAGTCTCCGATTTTGAATTCGAGAATGGTAGAGTAAAGCCTTGGGAGGGTGAGAGAATACACGAGGTTGAACCTGATGTTGGAGACCTGATTTTGGAACCTGTGGTAATCGCCCTTCATCTTGAGGTAGAAGACCTTAGAATCGCTGGAGGAAGCCAAGGGAATAAGGCGAGAGTTGAGGAGCTTGAGAATACCGTCGCAGATGTTGGAGAGCTCGGACTCGATCTTAGATCGGTAGTTGCGGATGACGGTGACGTGATCCTCGTTGTCGCGGCTCTCTTCCTTCTGCTCGATCGAGGAGATGATGCGCCACGAGACACGGCGCGCTCCGATCACGTTCTTCGAAGTGGAGAGCAATGCGCCAAAGATATGAAGGCAGCGGCGAAGGGAGGAGGCGGCGTAGGGAGCATAAACGCAGAAACGTCGTTGGAGGCAGCGAGATACACAACCCTCACCGCGACAAAAAAGAAGGCACCGTGGTCGTTGGAGGCAGCGGTGGGAGCAGCAGTGGAGAGAGCACCGACTTCGTTGGAGGCAGTGTGA


Promoter Sequence:
>Vu_12199::LG3:13955262-13957262(+)
TTTAAAAAAATTATTGTTTCTGTATCACATAAACCATATGAAAAAATCTTAGAAACACAAACAAACGCAAAAAGCATTGTTTTCTATTTATGGGGAATTGTTTTTTTGTTTTTTTCAAACTTTAAAAAAATATTTAACATAGTTACATTTTGAATTTTGAGCTGAAAATTTTTGTGAGAGAATTTCATGATTTTTGGGTTCTTTATACAAATTTTCATTTCATTTCTAGTTCGTTTGAGCATACTTTAATTTTTACATATACCTATATTTTGATGTGTATGTTGTATGAAGAATAATCAACCAAACGAAAACTTGAAAAACCCAAAATGAAACTAACCCTGAAGGTGAGTTTGGGGCTGAAACGAAACAAAATGAACATCCTAAAGCGTTTATTCGATGAGCTGAAGAACAGTTGTGCACAAAATCAATCGGTCAAAACGAAAAAAAAATCATACCTAAGCACTTAATCAACGTAAAATGAAAGAAAAAAAGCAAGAAAAGTTGAAGAGGATGGCTTCGAAAATGGAAGAAATAGAGCAGCGGCGCACATCACAAACAGAAAAGCTGATGTTTGAAAATGCATCTGTTCGCAAAATTTAACCATAAACAGATGATATTACCTTGGTTATTTTTTTAACTGAGGCAATAAGGGTCTATGACCTCGGTTTTATAAAGAATCGATGCCTAAACTCTCTCAAAAAATATTCAATTATTTTATGTCTCGGTTCTCTAAACAACCAAAGTTGTAGACTTTTGCAATAATTACAAAAATGTCATCGCGCCAGTTTTAGACATCGGTTCTTTTTTTAACCGACACATATACCTTTGCGAAAAATTACAAAAATGTCATCACGCCAATTTTAGGTATCGGTTCTTTTCGAACCGAGGCATATACCTTTACGAAAAATTACAAAAATGTCACCGCGCCATTTTTTTCTTCAGTTCCAACTAAACTAGTGTCAAATGCATGAGTTAAAATCTTTTTTTTACTAGTGGTGGTTATTAAACAGAACCTCTAGTAACTCAATCACCATCTTCATAACCTGAGGTTGTGACTCGATCATCTCTCACATTTGCCCCCATCGTTTCTGAGAGAGACACCAATACCAAAAATAATTAAACATCTTTTTATAGACTAAAGCTATTTTTATCTAAATTAGTTCTTGTTTTGTTCTCAAATAAATCAACTATATTACTTATGGCCAATCAACATATATCTATCATGATTTAATCTTTAAAAGGCATACGAGAGAATAAAAGGATTCAGAAAAGTTTAAACTATCTTAGTGTCAGTCTAGTTGCGATAGATAAACTAGCGACGATCTTGACCGTAGGAGACTGACACTGCAATTTATCCTGGAGACAAGCTTACATGGACAAATTGGTCAATGAATACTCTTTTTATCATTTGAAAGCTATAAGAAGAAGATGAAGGAAGGGTTGCAAACCTCTGAACACAAGATTGGGCAAGAAATATGTTATTCTTTTCATTTACGAAAAAAATTGTCAATAAATCAGTCAATAATCACTAGTACAGTAAGAGGAAACGACAACGATTATTTTTGCCTATAGACAGCGGTTCCCGAACCGAGGCATATCCAGGCGAGGCAAAAAGTCAACTACTTTTTGCCTCGGGTGCGAACCAAGGCATAAAAGGAGAGGATTTGGCCTCGGTTCAACCTTAACCGAAGCAGTAGAGTTTTTTATTTTTTTTAAAAAAAAAATTCGTAGGACTTAATGCCTCGGTTCCCCGTGAACCGAGGCAGTATGTCCCACTCTACTGCCTCGGTTGTAGCTTGAACCGAGGCAGTAGAGTCCTTCTTTAATTTCATCTGCTCCATCATCCTGGAAGCACAGTAAATTTCAAAAATAAGTTGTTGATAAGAATACAAAAAAAAACACGAAGGACGAACTTAGGCAAACTAAAATAGCTGCATGTCCGAGGTCCAAAGGGTGAGGTTATCACGAAGCAGTTGCATGATCAAAGTGCTATCCTTGTA


Gene Sequence:
>Vu_12199(+)
ATGATTCCTCTCCCAGTGTATCCAATTCAGCAATCGCTTCATCAAAAGCCTAGTGCATATCAAAAGGATAAAGATTCTAGCATTAGTTTGAAATATGCCATCAAAACAGAACATCTCAGTGTGATCGTGGAAGAAGATGGCACTACCTACAAAAAGGTAAACCTCGGTAATCACTCGTCTCATCACATCACAGGCTCAGATCTACAATCACTCTTTCTCCACGATAATGGATAATTAATTATTACCATTTATGTTGACACAGGGATGCAAGAGACCAACAGGAAGTGAGATTGGAGGCACTCCACCCAACACAAGTGTGTGTTCCTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCATCCCCACTTGCATTGACACAAACCCCTCTTCCTTTCTCATCCCATTCATCCGTAACATAACTTCAATTCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAACGTCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTTCCTCTCCAACGCTTCCTTCAGCCACCCTCTTTTCGCCACCTCCGCCCCCTCTAGTCCCTCGTGCCGCCGCCACGTTGCGACTTCCACCATCCTCGAGTGCGACGAGTCCGACACTTCCACCATCGACTCTACCTCCAGTCGTTGGGTTAGTTTTCACTATCAGACCCCCGTCGGTCCCCCTTCCCCTACTTTCAACCTCATGAAACCCGCTATGCACCAGATTGCTCCTCAGGAGGGCGTACAGTGGGGTTTCGTTGCAGAGATAGGCAGAGGAGTCTCCGATTTTGAATTCGAGAATGGTAGAGTAAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGACCTTACTCTTGAATTCGGAAAATTACAAGCCATAAACACAAGTTTGGATAATAAATTGAATAGATTTGAATCAAGAAATCAGTAAAAAAAAAAGAAATGGAAAGGGAAAAAAAGGTTGAACCTGATGTTGGAGACCTGATTTTGGAACCTGTGGTAATCGCCCTTCATCTTGAGGTAGAAGACCTTAGAATCGCTGGAGGAAGCCAAGGGAATAAGGCGAGAGTTGAGGAGCTTGAGAATACCGTCGCAGATGTTGGAGAGCTCGGACTCGATCTTAGATCGGTAGTTGCGGATGACGGTGACGTGATCCTCGTTGTCGCGGCTCTCTTCCTTCTGCTCGATCGAGGAGATGATGCGCCACGAGACACGGCGCGCTCCGATCACGTTCTTGTAGGCTACAAAGAGGAGATTCCTCTCTTCAACGTTGAGTTCCTCATTGTCTGCGGCAGCGGACACCTTCTCATATAAACTAACCGGCAGCGAAGTGGAGAGCAATGCGCCAAAGATATGAAGGCAGCGGCGAAGGGAGGAGGCGGCGTAGGGAGCATAAACGCAGAAACGTCGTTGGAGGCAGCGAGATACACAACCCTCACCGCGACAAAAAAGAAGGCACCGTGGTCGTTGGAGGCAGCGGTGGGAGCAGCAGTGGAGAGAGCACCGACTTCGTTGGAGGCAGTGTGA