Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12152 LG3 12345347 12350633 PREDICTED: uncharacterized protein LOC108336182
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 12345426 missense_variant p.Arg285Ser
C/G 12345521 missense_variant p.Asp254His
C/A 12345524 stop_gained p.Gly253*
C/T 12345573 synonymous_variant p.Gln236Gln
T/G 12345741 missense_variant p.Arg180Ser
T/G 12345748 stop_lost p.Ter178Serext*?
G/C 12345773 missense_variant p.Pro170Ala
A/C 12345794 stop_lost p.Ter163Glyext*?
G/A 12345821 stop_gained p.Gln154*
C/T 12345836 missense_variant p.Ala149Thr
G/A 12345848 stop_gained&splice_region_variant p.Gln145*
A/G 12346111 intron_variant
G/A 12346187 intron_variant
G/A 12346237 intron_variant
T/G 12346245 intron_variant
T/A 12346499 intron_variant
C/T 12347751 intron_variant
C/T 12347847 intron_variant
A/C 12347912 intron_variant
T/C 12347915 intron_variant
T/C,A 12347961 intron_variant
T/A 12347963 intron_variant
G/A 12348167 intron_variant
G/C 12348222 intron_variant
C/T 12348245 intron_variant
C/A 12348296 intron_variant
C/T 12348490 intron_variant
A/G 12348696 intron_variant
A/G 12348718 intron_variant
T/A 12348726 intron_variant
C/A 12348766 intron_variant
G/C 12348773 intron_variant
C/A 12348786 intron_variant
G/A 12348838 intron_variant
T/A 12348865 intron_variant
G/A 12348901 intron_variant
A/G 12348965 intron_variant
C/T,* 12349032 intron_variant
T/A 12349068 intron_variant
G/A 12349073 intron_variant
G/C 12349584 intron_variant
T/A 12349720 intron_variant
T/C 12349735 intron_variant
T/C 12349936 intron_variant
G/C 12350196 splice_region_variant&intron_variant
T/C 12350241 synonymous_variant p.Glu131Glu
C/G 12350300 missense_variant p.Glu112Gln
G/C 12350301 synonymous_variant p.Val111Val
G/A 12350332 missense_variant p.Pro101Leu
G/A 12350358 synonymous_variant p.Thr92Thr
G/A 12350367 synonymous_variant p.Phe89Phe
A/G 12350369 missense_variant p.Phe89Leu
G/T 12350547 synonymous_variant p.Val29Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12152.1
MKIYDDDDDSGSAGAFRCTRSQAAPDWSVIESLILVNEVAAVEADCSVALSSYQQWNIIAQNCMALDVQRNLAQCRRKWHALLSDYDRFKGTATAGGKLPPNFDYELFEAVERVVRAREERGMADPESDTEAGNEARDETVEIGSKRKGQRSKFRHRIQKPKLEQRHEDSHEEEHEDDNSEDEYLKDYLESRPKLKCTTERPPKHSGISPKSLKVELHENHTERPKPVTVEKIAISREENQETLTLKLQDLAVEIEAIATKSATDYKGGDSKNVEDSCTDFTRRQGDKLITSLGDFSNTLKQLCDIVQECK*


CDS Sequence:
>Vu_12152.1
ATGAAGATTTACGACGATGACGACGATTCAGGTTCGGCTGGTGCCTTTCGATGCACGCGCTCCCAAGCGGCTCCGGATTGGAGCGTCATCGAGTCTCTCATTCTGGTGAACGAAGTCGCTGCGGTGGAAGCCGACTGTTCCGTCGCGCTCTCCTCCTATCAGCAGTGGAACATCATCGCCCAGAACTGCATGGCCTTGGACGTGCAGCGCAACCTCGCGCAGTGCCGCCGCAAGTGGCATGCGTTGCTCTCTGACTACGACCGCTTCAAGGGAACCGCCACCGCTGGAGGCAAGTTACCGCCGAATTTCGATTACGAATTGTTTGAGGCCGTCGAACGCGTTGTTAGGGCGCGTGAGGAGCGGGGCATGGCTGATCCCGAGAGCGATACCGAAGCAGGGAACGAGGCGCGTGACGAGACCGTGGAAATTGGGTCCAAAAGAAAAGGGCAACGAAGTAAGTTCAGACACCGCATTCAAAAGCCCAAACTTGAACAAAGGCACGAGGACAGCCATGAAGAAGAGCATGAGGATGATAATTCAGAAGACGAATATTTGAAAGACTACCTAGAATCAAGACCTAAGTTGAAATGTACTACAGAAAGGCCTCCAAAGCATTCGGGAATATCACCAAAGAGTCTCAAAGTAGAGCTTCATGAAAACCATACTGAAAGGCCAAAGCCAGTCACTGTAGAAAAGATAGCAATTAGCAGGGAAGAAAATCAGGAAACATTGACTCTGAAATTGCAAGACTTGGCAGTGGAGATTGAAGCAATTGCTACTAAATCAGCAACAGACTATAAGGGAGGTGACTCTAAGAATGTAGAGGATTCCTGTACTGACTTTACAAGACGCCAAGGGGACAAACTCATAACAAGCCTTGGAGATTTCTCCAACACCCTCAAGCAACTATGTGATATTGTCCAAGAGTGTAAATGA


Promoter Sequence:
>Vu_12152::LG3:12350633-12352633(-)
TCGGAAAAAATTAAAAAAAATATATAAAAAACTAATATATTAACATGTCTTCGTTTCAAATAACCAACTCGAGATTCTCTTTAACATCTTTGAAACAAAATAACTGATGAAATTAAATCCATTTTTTTACATCCCAAAAATATAGCTGTAAACTATATTTAAGAGTTCTTACATTTACAATAAAATAGAATAGTTGCAGGAAATAAAATTAACTTATAGTTATCCTAAAATAACCATAAATTTAAAAACTTTTAATAAATAGTTCCGATAGAAAACATATGAACAAATCGAACAGTTATACAACACCCTGTATAAACCGAACGGTTTACAAAAGATATACTAAGTCTGATGACCGAATGGTCCTAACTAGACTGTAGGGTTATCGCCTTTCAAAGCCTGCTCCAACAACCAAGCATCACCTTCTGTTCACATCCACAGGATGATCATTGCAAAAGAAAAGATGACTGAACGGAAAACACAAGACAAGATAGTAAAAGTAGGGTAAGCTAGTGTAATTTAATGAATCATAATAACATAAACAAATACACAATCATATATTCAATCGAACATTTATAAAATCATCAACATACATTTCAGACAAAGACCGAACATAATATACATGCAATGACCGACCACTTTACTTGATCATCCAGATTGTATGAATTAGCTTGGGGTCGTCCTTGCACCCAGGTGGTGTAGTAACTGGAAACCCCTCAACTCCCACCCGAGGTTAGTTTGTCATACCTCGCCCAGATCCCCTCTAGATTAGGACCTCCTGCCATTCTCACATTATGACTTACCCATCTCTACTTGAGAATTGGTAATCATTAGAATTTCAGGATGAACGCCGTGAATTTCATTCTCCATATTCATACTTTACCAATTCAATAACCATACACCGAGACATTCCTCTTTGGAATTCTCTTTCATACCATCTTGAAATATAATACCAACATACTTTTTCATCCATAATATATTGAAGTAAAATTACGCCGAACAGTAAAACAATCACCACCATTGAGTACAATCGAACAGAAAAGCGTAGCATAACCTCTGAACAAGACCAAAAGGGAAACTACTCCCTATATGTGAACATGATCGAATGGTCATGTAAAGAGTAAAACTCAAGCATGAGCATAACGTCTTTGAAACTAAACGCCAGAACAATTTCTTTATTTGATACATCTATCCTCCCTTTCGCATGTCATTTTCAGCGGCTGACACATTTAACATAATGAGAATTGAAAAAAAAATATTAAAATCAAAATGAATCAAATCCAAAATAAAGGATCAAAATAGTAATTAACTATATTATACATTAATTAATAAGATCTCTTATTCTATGTATAACACACCTTTTTTTTCTTTCTTTTCTTTTTTACTGGAGAGAATAATTTTTGCAAAATTCTTTACCAAGAAATTTTTTAGAGTAAAAACTTTTGATTTTGTTTTCTTAAAATTTCTTTTATATGGAGTGCTTTCCATAAATACACCTGTTATCAAATTTATCTAAATTGTAGTGGACAAACATGTTTGACCACAAGTATGATATGATTTTAGCATAATATGGAAACTAAAATTACATAACAAAAATTGAATTAACTTATAGACTTCGAAAAAAAATATAAAGATCAAAATTACTTAAAAAATTAAAAGAAAAAATTACATATTGAAAAAAGAATTGAATAAAAAATATAATCAAGCCTAATAATTTATTCTAACTTCAAATAATTACACTTTCATAAATGCTTATATATTTTTTAATTTATTGCATTTAAAACTGATCTGAAAACATCTCAGTTTGTAATAACTAAATATGGATTTTCACAGCACAATAACATTTCTTAAAATGAGCCTAGATTAATAATGCGACACGTTTTTAGCAAGAATCTGTGAGAGGGTTTCGGACATGATTAGTGCAAAGCCACAAAGCACCTCCCCCTTCTCGTCGAGCTTCCTTTTCTGGTTTCTACATGGGAACGAATCGAGGGCAAAAAGAA


Gene Sequence:
>Vu_12152(-)
ATGAAGATTTACGACGATGACGACGATTCAGGTTCGGCTGGTGCCTTTCGATGCACGCGCTCCCAAGCGGCTCCGGATTGGAGCGTCATCGAGTCTCTCATTCTGGTGAACGAAGTCGCTGCGGTGGAAGCCGACTGTTCCGTCGCGCTCTCCTCCTATCAGCAGTGGAACATCATCGCCCAGAACTGCATGGCCTTGGACGTGCAGCGCAACCTCGCGCAGTGCCGCCGCAAGTGGCATGCGTTGCTCTCTGACTACGACCGCTTCAAGGGAACCGCCACCGCTGGAGGCAAGTTACCGCCGAATTTCGATTACGAATTGTTTGAGGCCGTCGAACGCGTTGTTAGGGCGCGTGAGGAGCGGGGCATGGCTGATCCCGAGAGCGATACCGAAGCAGGGAACGAGGCGCGTGACGAGACCGTGGAAATTGGTACGTTCTAATTTTTCTGTGAACTTTGTCATTGTGTTATTAGAAGAATGACTCGCCTACTATTGTTAACCGGTTATTTTCTTTTCTGAAACTGTATATAATTTAAGAATTGTTAGAAGAGTGTTATGATTTTTCAGATGCTCATCCAATCACTAATTGATATGTATGAAAGGATCATTAATTTTTTAATAATTAGTTTAAAGAATTCGTGTGTACTGTGTGGGGGTGATGTTTAATTGGTTGACCAATAAAAATAGTTATACTTACATATTGTACTCAAGTTTTAGTGAAGTGTATGCACTACCATTAAAAGTTTTTACATGGCCATATAAAAATTATCCTTAAACTAAATTATAAAATTCAACTCATTTTTATATTTCATATACTTTATTATACACAATAATTTGTGATTGGATAACAATGTAAAAGATCTTTATGTATTGATTATTCATGTTCTTTGAACTTACCATATATGACAGTTTAAGTTTGGTGTGAATATGATTGCTACAAATAATTTGTGATTGGATAACAGTGTAAAAGATCTTTTATGTATTGATTATTCATGTTCTTTGAACTTACCATATATGACAGTTTAAGTTTGGTGTGAATATGATTGCTACAATCTTTGTTATGGTGATTGGTTGACTAAGTAGTTTGATTCATTGCATTTAAACATGGAGTGTTGAAATACGAAATTTATTCTTTGTATCATGGCTAATAGCAATTGACTGATGGTTCTCGTAGATATGCCTAATTGAGCATGTTCATGTATTTGTGGCCATATGGGTAAGTTGTTTGTGCTGGCATGGAAGGGGGATGTTAGAGGAGGCTTTCGACTAACCAGTCTTACAACTTAATTTGTCTTTATTAATGCATATTTGGTTGGTGGGCTATTTTAAATGCACTCCCGTGCTCTTAAGAAACCTATAATTTCCAGATGGTAGTGTTGTTGACTGGTAATTGTATAAAACTTAATGGAAGCCTATTGTCAATGTTAAATGTTTAGTTTGGTGAAAGTAGGCTTAGGGGCCTTGGTTGATTTAGAGAGCTCATTAATGACTGAAAACTCATTAAGAGATATTGAGGGGATATTTAAGGATAAACTTGTTTTGATCCTAATTTATTTTTTTCCCTTAGTAAAAGGTAATGAACAAACCATGGAATTTAATTAGTCAGTTAATACTTAGTGGTAGAACTGTAAGCTGGATGTTTTTTTATAGGAACTAGGGGTGGCTAAGTATCCACTCCCCACCTATTGATGAATGTGCACTTCAGATCTAGGGTTGGCCAAGCACCCATCCTCGCCTTTTGAAAAAAAACATGATTGGGTGGATTGGCACTATTCTGAAAATGGATTGAGAAGGCCGATTTTCACTCTGTCCCATCATGACAATAAGATGGGGGAAAAAGAATGATTGATGCAGGGTTCGCTGACAGGTTGCACCAACACCTTTAATGGGTCACTGGGTCTCTCAGCAGGAATATTATGATGGAAGATCTTTGCCCTTTCATGGAAGATGCCAGATTGGCCTCAACGGCATGGAGCTTGTTGCATTATTGAACACATTTACATGAAATACTATATCTAGGCTTGGATTGATAGTGGTGACTCAAATTGGGCCATCAATGGAGCTTGTGCATAGTGGTTGTTGAATTAGGCGTTCATCTTAATGAGAAGCTTGGATTTAGAGTTTTAATCCATCATTGGGTAGAGGTTGTCATGCAACCAAAAATTTGGGCCTGGGATGAAATTTGGAATCAACAGAAGGAAATCTGAAAGCATTATGGTCTTTTAGTGTATTGAGCTATCTCTAGGGTGCTGTGTTTGATAGTTGTAATATCGTCTCTTAGTAGGTGGTCAGTCTAATGACTCAATGTTACGTCATTTGGTAAACCATTGGTCTGTTGTATATGTTCAATTATGTCAGGCAGTTGTCTCTGTGTATCACCTTTTTGTTGTTCTATATAAGGGTAACTTGTACTTGTTGCGGTTATACAACAAAGTAACGATTTGTAAAGCTTATTTGGTTGCTAAACAAGATAATTCTTCATCTTTATGTTGTTATGCATGCTCTTTGTTCTGTGTCTCTAGTTGGTTAACCAGTATTGTTTCTTTCATTGTATTCTGGGCTCATTTTGGCACTTGATTCACAAGAGACTGGTATTAGAGCCAACTTTGATCTTGTTTAGTGTTTTTGATAAGTTTTTGTAAGAAGATAAGTATCACATCCAAGAACGAGATAATCAATGGGAAGAACAATTTCTACTGGCGTAGAATTAAGATGTGAATCTTGCTCAAGGAACAAGGGGTGTCTGTGCCACATTTTAAAGCATCTCGCATAGAGAGGCAAGTTCTGGAGTAGATGGAGAAAATTCTTATTCGATGACACTTTTGTCATTTTGAGATAGGTTCTTTATGTTGTTGCAAAAGAGAAGATCTTAACAATGTTGTGGCTAAAGTTGAAGAAGCTCTTTATGACATAGTCCATTTGTGACGAACTTTTGTTGAACAAGAAGTTGTTTGGGATCTGTATGACAGAGCATATGCCATTCAACGTCCATCTTGATGATCTCAATTCAATTTTGATGGAGCTCCAAGCCATTAACGTGAAAGTCGAAGACGAGGATGTAACAATGATTCTATTTACCTTTCTCACACTGTTGTACAAGAACTGGGTGGGTTCTGAGTGTAAGGAAGGACTGCATCACGCTTGTAGAGGTTAAGTTTACCCTCTCTTCTAGTGAGCTTCACCTCAAAGCATCTAAGAGTGTAAAAGATGATCATCCTCTACATTAGTGGTCTTCAAGATTGACAAGATGGTTAAAGGGTCGAAGAAGACAAACGTTGATCCTAAAGATGTTTGCAGATGTTGAAAGCAATCGAGACATTGGAGGAGAGATTATATAAGGTTGGGGAAACAAGATTGTGGTTGTATATTTTAGAAGGTGGAGTTGTATGATGATATCAAGTGTTGACTACTATCTCTAAACAAAAGTCTTCTAAGAGGGTGCTGAATTCTTGGTGCTCCTTTCACATGAGACCTCTAGGAGACTTGTTATCCACCTTTGATGTCCTTGAAGTTGCTTCTTTAGAGCACACAGCTCAGCCACCAAATCCTATTTCTCTTACTTGTATGATGTGCCCAATACCTTGGTGAGGTCTCTTGCAAACAACCTTCTTCCAATGATGAACGGTATCATGCTCCTCCTTGCCATCATTATCTCAGCTAAATCAAAACTTTCATTGGGCTCCATAATAGACACCAGATAGTCTTACTAAATGTGGAGAGTTGTAAGAGATGTTGTGGAACAAATCTCTTTCCCGAGTTGTGGCTACTAAGAAATGAGCTTTGGTGGTAAAATTTGAGCACCAAATGGAGGTTCACTTGTAGAAGACTCTCCGATGCTCAAATAAGGAGAAATACAAAATATTTATGAGTGAAGAGAACTAAATGATACTTCCTTTAGCATATGTTTATATTTATAGTCCTTTGGGCCTCCATATATGGGGCTAAGTAAACAGTAAACCTTTCAGTTTCTTAGTTGCTTTCCTTGCTTTACTCAATTGATCAAGTGGTTGATCTATTTTCATTTTGGTTTTGATTCCAACATCTGTGGTAATCAGAGTGTACTTCTGTTTGGGAGTAGGTTGGTACACATTTTATTGGTACAAAATATAGATATTACTTCGTGGATGGCTAATCACCTTAGAAGTACTTGGTTGCTCCTCTTTAGTAGAGTCTTTCCTATCAATCACATTTTTTACAACTCAGAAGGTGTATGATATATCCGGTTTAAGAAAATTGAGTTTAGTTTCACTTGGACCAAGTACTTGTTCAATAAGTTTGGAGACATAACATTGAATTTTTCGTTGAATGAAAATACAATAAAAGGAAGAATGGCACACATCTCATACGACACAAGAGTCTTTATATGATATTTGATTTGGTTTTTTTCCATTTTTAACACAAAGGCGGAGCAAGTTGAGAGAAGAAAATTGTGATTCCTACAAGTTGCAATTGAGCATAAATTTTTTTATTAATTACGATTGATACATATGGAGAGTTGAGAATATTTTAGCCTTTCATTGGTTGTCTTATGCAGTTTAAATATAAAATGATCATTCTTACTCTTATAGTTAAGTGGTAGTAATTGTCAATATTGGCACCAATTTTTCTTAATTTGTTCTTTTTTTGTGAAAATTAATGTATAGCACGAGGAACTGTTTTGATCAACACCGTAAAATTTCACATGTTTCTTCTTCCTTTTTCCCCACTTTTCTATTTATCCCTTTTGGAGCATTACCTTGTGAGTTTCCAAACTGATGAATTTTTGTGAATTCAATGAATAGGGTCCAAAAGAAAAGGGCAACGAAGTAAGTTCAGACACCGCATTCAAAAGCCCAAACTTGAACAAAGGCACGAGGACAGCCATGAAGAAGAGCATGAGGATGATAATTCAGAAGACGAATATTTGAAAGACTACCTAGAATCAAGACCTAAGTTGAAATGTACTACAGAAAGGCCTCCAAAGCATTCGGGAATATCACCAAAGAGTCTCAAAGTAGAGCTTCATGAAAACCATACTGAAAGGCCAAAGCCAGTCACTGTAGAAAAGATAGCAATTAGCAGGGAAGAAAATCAGGAAACATTGACTCTGAAATTGCAAGACTTGGCAGTGGAGATTGAAGCAATTGCTACTAAATCAGCAACAGACTATAAGGGAGGTGACTCTAAGAATGTAGAGGATTCCTGTACTGACTTTACAAGACGCCAAGGGGACAAACTCATAACAAGCCTTGGAGATTTCTCCAACACCCTCAAGCAACTATGTGATATTGTCCAAGAGTGTAAATGA