Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12065 LG3 9907281 9912459 PREDICTED: dr1-associated corepressor homolog isoform X1
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03021 Transcription machinery [BR:ko03021]
SNP Position Effect Amino acid change
A/T 9907354 5_prime_UTR_variant
A/G 9907355 5_prime_UTR_variant
T/A 9907373 5_prime_UTR_variant
C/T 9907575 missense_variant p.Arg8Cys
G/T 9907746 upstream_gene_variant
G/A 9907752 upstream_gene_variant
T/C 9907821 upstream_gene_variant
A/G,* 9907870 upstream_gene_variant
C/G,* 9907873 upstream_gene_variant
A/G,* 9907911 upstream_gene_variant
T/C,* 9907926 upstream_gene_variant
G/A 9907958 upstream_gene_variant
G/A 9907971 upstream_gene_variant
G/T 9908011 upstream_gene_variant
T/G 9908104 upstream_gene_variant
A/G 9908196 upstream_gene_variant
G/T 9908231 upstream_gene_variant
G/T 9908239 upstream_gene_variant
A/G 9908252 upstream_gene_variant
T/C 9908258 upstream_gene_variant
G/A 9908275 upstream_gene_variant
A/G 9908442 intron_variant
T/G 9908450 intron_variant
C/T 9908585 intron_variant
A/G 9908679 intron_variant
T/C 9908863 intron_variant
T/A 9909009 intron_variant
T/G 9909101 intron_variant
A/T 9909217 intron_variant
A/T 9909301 intron_variant
T/C 9909333 intron_variant
T/C 9909362 intron_variant
T/C 9909480 intron_variant
G/T 9909499 intron_variant
T/C 9909522 intron_variant
A/C 9909553 intron_variant
C/T 9909709 synonymous_variant p.Asp23Asp
C/G 9909712 synonymous_variant p.Val24Val
G/A 9909794 intron_variant
C/A 9909805 intron_variant
G/C 9909847 synonymous_variant p.Leu39Leu
T/A 9910080 intron_variant
T/A 9910169 intron_variant
A/C 9910172 intron_variant
G/A 9910174 intron_variant
T/G 9910201 intron_variant
C/A 9910229 intron_variant
A/G 9910234 intron_variant
G/T 9910420 intron_variant
T/C 9910447 intron_variant
C/G 9910449 intron_variant
G/T 9910479 intron_variant
T/C 9910524 intron_variant
C/G 9910587 intron_variant
G/T 9910625 intron_variant
C/T 9910637 intron_variant
C/G 9910693 intron_variant
A/G 9910704 intron_variant
G/A 9910709 intron_variant
T/A 9910715 intron_variant
T/G 9910727 intron_variant
T/G 9910731 intron_variant
C/T 9910747 intron_variant
T/C 9910776 intron_variant
C/T 9910786 intron_variant
C/G 9910878 intron_variant
T/C 9910906 intron_variant
T/A 9910919 intron_variant
T/C 9910996 intron_variant
C/T 9911059 splice_region_variant&intron_variant
T/C 9911068 synonymous_variant p.Tyr69Tyr
A/G 9911156 missense_variant p.Thr99Ala
A/G 9911259 intron_variant
A/T 9911260 intron_variant
C/T 9911262 intron_variant
T/A 9911357 intron_variant
A/G 9911359 intron_variant
T/A 9911380 intron_variant
C/T 9911431 intron_variant
A/G 9911453 intron_variant
C/T 9911457 intron_variant
T/A 9911534 intron_variant
T/C 9911555 intron_variant
G/A 9911713 missense_variant&splice_region_variant p.Arg130His
G/A 9911731 missense_variant p.Ser136Asn
T/A 9911735 synonymous_variant p.Thr137Thr
C/A 9911736 missense_variant p.Pro138Thr
A/T 9911766 stop_gained p.Arg148*
A/T 9911774 synonymous_variant p.Arg150Arg
G/A 9911921 synonymous_variant p.Lys199Lys
C/T 9912219 3_prime_UTR_variant
A/T 9912220 3_prime_UTR_variant
G/C 9912298 3_prime_UTR_variant
A/T 9912310 3_prime_UTR_variant
C/T,* 9912371 3_prime_UTR_variant
T/C 9912376 3_prime_UTR_variant
C/G 9912404 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12065.1
MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKYCVQSYNVFDFLRDIVSRVPDYGHGHGHSETGADDRALSKRRKAAGVEGNESDEEAKRSKMRELGHTSTPSRGRGRGKGRGRGRGVRTVERDIIHQQVESEPCSSIQQISNDMPNTSLPIDNGVQSKEYTKETSAAHEESAQSFRNIDLNANLNENGDKNASAAVEAPLPEPADMDIKHEEIPGWSLSDADKMAIDTMQLATLASRLEEDDEDYDEEG*


CDS Sequence:
>Vu_12065.1
ATGAGGAAGAAGCTCGACACCCGTTTCCCCGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGACGTCGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGTTATTTTTGCAAGATCTCTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCTAAGACCATGAATGCATTGCATTTGAAATATTGTGTACAAAGTTATAACGTCTTCGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATGGGCATGGACATGGCCATTCCGAGACTGGAGCTGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTGCTGGTGTTGAGGGCAATGAAAGTGATGAAGAGGCCAAGAGGAGTAAGATGCGCGAGTTGGGCCACACCAGCACTCCTAGTAGGGGAAGAGGCCGAGGTAAAGGAAGAGGCCGAGGACGAGGGGTTCGAACTGTTGAAAGAGACATCATTCATCAGCAGGTTGAATCTGAGCCTTGCTCCTCTATTCAACAAATTAGCAATGATATGCCTAACACAAGTCTGCCAATAGATAATGGTGTGCAATCCAAGGAGTATACAAAGGAGACTTCTGCAGCTCATGAGGAAAGTGCTCAATCTTTCCGTAACATTGATCTGAATGCTAACTTAAACGAAAATGGAGACAAAAATGCCAGTGCAGCTGTTGAAGCTCCATTGCCTGAGCCTGCTGACATGGACATTAAACATGAAGAAATTCCAGGCTGGTCCCTATCGGATGCCGACAAGATGGCCATTGACACTATGCAACTGGCAACCCTCGCTAGTAGACTAGAAGAGGATGATGAAGATTATGATGAGGAAGGGTAA


Promoter Sequence:
>Vu_12065::LG3:9905281-9907281(+)
TTTATGTATTGGTGAATTTAAAAACTTCTTGGACTAAAATAAGTTGCTTGGATGATAATATTAAAAAGGATTGAAATTTTGGAATATCTAAAAAGTATTTCAAAAAATTAAAACAATGAAATTTAAAAAGTCGTTAAGAAAACAAATCACAATTTCACTACTTGTCAAATTTTCTTCATATATATATATATATATATATATATATATATATATATATATATATATATTAAAACTAGAATTGTTAAATATTATTTAAATATTTAAATTTTATTATAATATTCTTTTGTAAAGTTTAATTTTAAAATGAATGTTTCCAAAATGAAATTTTGTGTTACTAATTTATAAAAAAAAATGTAAGATATTTTAATTATTTTATCTTAATAAAATATTTAAAAAATAAAAATAATTCATTGCGAAACAATTTAAATATTATATATTTTAATGTGTTGAAATTGCATACAAAAATAATATATAGGATTGTGAGATTAGTTACTTTTAAATAGACGCTAATTTACATTATGGATAAGATTAAGATAATTAAAAAATATTCTAGCTATAAATTTAAATGTCTTAAATGACAATATAATAACCGTTTATCATGTTAACTATCATTTTATATTATATGACCGTAAAAGAAGAAGTTATGATCACACAAAAAATTGTTCTTACATATAATTGGTTCATTATAATCAATATTGATATAGTTGGTTTATATTGCAATAAAATAAAAAAGAAAAAGTAGTTTTAGTACATTAACTTTAATAAACAGAGCTTTATATTTTTTGTTTTTACTTTGTAAATTTAAAATCTTCTGTATCTCTTTTAAATTTAATTGTATATAACTTTTGATTGATTTACTCTTTAATAAACATATGTAACTGCCATTAAAAATTACCATGAGCTTCAAATAAAGCATATTATATTAAGTTATCATTTCTTTCTTATTTATTATTCTATAAAATAAGTTACATATATATAATAATATTTAAAAAAAATTATTATTCACGTTCTTTGTAATGTTATTTTTCATTAAGTTATAAAGATTGAAGACTTACGAGTAAGTTTATACAGACTAATTTTAAATATAATTTTTACTAGGTTGTATGATGTATTTAATTACTCCCATATTTCAAATTATTCCATGATCAACTCCAATTTTTTTTTAGAGTAACAAAATTATTGATTCGAATTACTCATGAAAATAAAATTATTAGGCTCATTAACTGGCTATATTTTCTGAAATAATTCTAACTACTTTATCTAATATTACTTTTATATTAAAGATTCTATGTTAATTAAAAATATTATGGAATTAATTAATATACATAAGTAACCATGCCTTTACAATTTTTTTAAAGATTTGTTTAGGTCACAAATTCAAATTAAAAAAAGTATAAAATTTACTTTGTGATAGGTGTCGTATAAACAACTCATTATTTTGTACTAGATTGTCTTATGAAAACATCAAACATAAGTATGATAATTGGATGTAGAATATACATATTTTTACAATAATTACTTTTAGCATATTCCAATGATGTTTCAAACATTGAATAAATATAAAGCCTATAATAATAATAATAATAATAACTATTATTATATTATAAATTTGTAGCATTCTTTAAAATCAATTGTCGTTAAAAAAATATTAACATCTTTTTTTTATATTTATAATAATGATTTATTATTTTAAATTTAATGTAATTCTTATATATTTTTTTAAAACTTCAATATAATTTATTTGGTTAAATCAACGTTATTTTTTTTTGTTTATGTAAAAATTACAAAATAAATATATAAAAAGAATTGATTATTATATTAGGATATGTTAATTCCTCTTTTGAATAAGAGTAAATTAATATAAAAATCTTATTAAACTTTTTTAAAAAATATAAAGGACCACTTTCAATTCAATAAATAAAAAAAATTTCGAATAGTTGTTTTTTTTTTTTAAAAAACATTCTTTAAGAACCTATGATGTTTTGCATCATAACTTTTGT


Gene Sequence:
>Vu_12065(+)
TTGTCAGGTGTTGTGCAACGATTGGTCCATCGGAACCCTTCCCTCACAGCTGTGTGACGTTGCAGGTTCCTTCAATCGTCAAACTCGTACGGTCGGGTATTCCGAATCAGAGACAGCCACCTTCGGATCTGAGACGAGACCAGATCGTTTCGCTTCCTTTGATTTTGTCTACTGCTTCGTAGTTTCCTATTCTCAGCTTCCAGATTTTCTTCTTCTTCTCATTCTTTTTGTTGGAAGTTTCGTTCCTCTTCGTGTGACCCCTGATTCGATACAATGAGGAAGAAGCTCGACACCCGTTTCCCCGCTGTAAGTAAAAATTCGTTTTTCAGCTATCAAAGTTTATTCTTTGCGCGTAACTCTGCTATTTGGGGTCTCAGAAAACTGTGGAAAGTGAAAGGAATGTTTTTTCCGACTTTAATTGAGTGTTTCTCATTTGGGTTTATGGTTATTGGGAGTTTCTGGGACGGGGGAGGGGGGTTGAATTCATTGGTTAAAGTGTAATTCAGTGTAATTTCTGGGAATTTCTTTGTTTGTGGTTGGTAATTGGATTTGGTAATCAGTACTCTTCGAGTTGGAGTTTTGGGTATGTAGCCGAGTTTAATACTTGGAGGAAGAGTTCTGCCAGGTTTAATTCTAGGAAGTTGTTTGTTTGTGGTTGGTAATTTAGTATACTTTGAGTTGGAGTTCTGGGCATGTGGTCGTGTTTAAAACTAGGAGGGAGAGTTTTGTCGATTGTAATACTCCTACACGACTTGAGCAGAATTGTCTCTTGTGGAGAATGCCCGTGGCGACGTACTAAAAATGGATTCATACTCATGAGGGTTGTTTGGAGATTGTGATGCTAATTTTGGGTGCTTGGCGTAATTTGGGTTCTGTGTGTTTAGTTATTGATGGATGCATGTGTTGAGACTGTTGAGGAGATTTATGATGAAAGGTTCATTTCATGTGTTGCGGGTTTGGATTTGATGGTTATAATGTTCTTTCCCTTTGAATTGTTCTTATGAAGCTGAAATTTAATACCTTTTTTGTGAATCTTTGATGGAATGGGTTTAGAAATATGATAGTTTCTTTGATGATTTTTGCTGAAGCAAAGATATTATATAGACTGTAAAGTATATTTGTACACATGTACAGGAACATGATTTTTTACTTCAAGTTTATACTCTATTTATAGGTTAATGATCGTCCATGGATATGTTCTCTATAATCATAACGACTTTAAGTGCTCTAGAAGATTTATCTAAATGTTTATACCTTTTATTGTTTTCTGCTACCATGTATTTGCTGTTTTATCTCTCAATTCTCGGATTAGGTGACAAGTACATTATTGTTCAATATATAGCATGATATTTTAAGTCTTGATTCACTTTTCTTACCTAGCTAATTTCTCAAGCTTTTAATGTGTACGCTGATATGATAACCTCTGATAACATGATATATGATAATCAGTGTTTTAAAACCCGACTTGAAGACAATTGGTCTAATGGAACAACATATTTGAATTTACTACTTTTGTGTTATAACCTGGTCTTGATCTGTGGATATAACCTTGAGCACCTACTTCATGAATGGCTTTCTCGAGTGCCTATCCGCACAACTTCTCATGCTGGCTAGCTGGCAGCAGCTTTCTCCAACAGCTTCTCACTTGTTACTTCAATTTTAAGGAAAATAAAGGCTAAACTTCACACTTTAGGTATCGAACCAAAGAGCTGGGATATTTACAACTTCTCAATTTACCACCATGACACTAATTGTTTGGAAAATGTGCAAATAATATATCTACTATATACAAATATTATGTGCCTTTCATCTGTTCTTGCTGTTCCACTATCCACTGGTTTCACCTGTAACCCATTAACTTTGTACCTCTACTGAGTTGACGACTGGTCAATTTTTAAAACAATGATCATAATGCAATTATTGTTTTAGGAAATACACTTGTCATTATAATTAGGGAGAGACACAATAGCATTACTGCTAAGTTCTATCCATCAGTTTTAACCATATACTTTCCCAACACAGAAGTAATGTCTGATTAATAATACTTTTGATTACATTGTTTGCCTTGCCTCTGGTACTTGTATTGTTTACCTTGCCTTGCTTCTTGTCCTTACATGATTTTTCTCTCTTCTTGTACCCTTTATTTTGTTAGGTAGCTGACAGAGATACCAATCTCCATATCACCAAATTTGAAGCATGTAGAAGGGGGAGGGGATGGGGTGGGAATTAGATTCTATGAAATGGGAACTAAGTTTTCAGTTGAACTATAATTATCTTAACAAATTGGAGTGTTATTCAGATTCAATTCTTCCACTTTTCTGTTCCATTATTTAATTTAAAGGAAAGAGATATTTTTAAAGAATGCTTTATCTGATGGAAACTATAATTTTCAGGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGACGTCGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTATGTAAGTTGCTTTTACATACTACCTAGTCAGTACCTTCCCACAGTTTCGTCATTTTCCTCATTGTTGATGTCACTCTTGGCTTTTTTACAGCTAAAGCTCTGGAGTTATTTTTGCAAGATCTCTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCTAAGACCATGAATGCATTGCATTTGTAAGTCAATGAATATTTTTTATTTAAAGTTTCTTCTACATTAATGAACCTTTTGAACTGAAGTGTGTTCATTTTTGGGCGTATTTTACCCTGTGCTGAAATTTATTTTAATTTTTTTAAGGTGTGTTTAAATTATTAAACACCTGAGGTAGCAAATACCAGTCCTCATCACTTGGTTAAAGATGGTCAAGTTCCATTTTACGTATGATAAAATCATACTATATATTTATATATCTCTTAAATGATTTCATGTGATAATTTATTGATTTTTGTAACTCCTTTGAAATCTGCTTTTTGACTGGAAAAAGTCATTTAACTCGAGCCTTTAGTTCAACCAAAAAACAAATCACATGTTTGTCCTATGTTGATGAGCATAATTTCTCATTTGGTTTTGTGTGTTTAGTAAATAGGCTCATAGGCCGTAGCTCATGAAGCAATTCAACCCTTTGTTGGGTCAACCAATTAACATAATCATCTTTGGATGGAATAGTTGCTCCTTTTAGCAATAATGGAGTTTTCTTGACCACACATAGCATGAAAAGTGGACAGTTTTCTTGAAAAATTTTAGTTCGTGAGCCAAAATTAAGCCCAGCTAAGTGAAGGGGGCCATTATCACCGAAACAATTCTTTCCAAAAATGATTCAAGAAAATTGGGTCATTATCAGAGAAAACTGAGAACGGAAATCCATCCAATGAACCACCTCCTCAGCTGAACATGGATGAGGTAAAGGGAAAAATGTACAAAATCTGTTACTCTGTCCACTAGTACAAAAATAACGTCCTTTCCTTGTAAAACTGGTTACTTCATCATTAAGACTTCAAATATACTTAAGATTTTGTGCTTTTTTTTTGTATCTTTTGCTATGTTTGAACATAAGTTGACTTACTTGTCTGTAACTCCTTTTAAACTGAAAACCCTGAATAAGATGATATGATAGCACTGTAACCAACCCTAGGAGTTACAAGTTCTCTTTCTCTGATATCTCTTTCAAATTGTTAAATTAAACTATATAAGAGTCAGGTCCTGTTTATTTATGACATAATACCACTTCTCTTTCCAGTTTGTCCATCAGAATTATATCTTGAGTACATTACAAGTCTAGTCTAACCAATGGCAAATGTAAATTGCAGGAAATATTGTGTACAAAGTTATAACGTCTTCGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATGGGCATGGACATGGCCATTCCGAGACTGGAGCTGATGATCGTGCCCTTTCAAAGAGAAGGTTTGAAGTTCAGTAACCGTTATATTTTTCCTTATGGTGTCTGATTTAACCATCCATATTAGCAATTGAAACATTTAAGAATGCTATATCTATCAGGAAAGCTGCTGGTGTTGAGGGCAATGAAAGTGATGAAGAGGCCAAGAGGAGTAAGATGGTAATTGCGTTTTCATGAAAATCCGTGATAATACATAATTATATTTCTTAAATAATGGTAAAGTGTCACACACACTGACAATGGTGCAAAAGTCGTTACATTTATACTATCTCATAATATTTTGTTAATTCTACCATTGAATTATATCTAGTTATCATGTTGAAGTTTCACTTCATTCTAAATCTTTTTTATGTTTAAAGCAAAAGCATGTGTTATCAAGTGGATATATTTGTTTTGCTTTGTTTTTAGAGTAATATTTTTCATTAGAAGTTGTTCTTGTTAGGAAGGGAAGTTGTGTTGTGTGTAAAACGGCCTAATCTTGGACTTGTATTGTTTTGGTCAATAACATTTGTTGTGTTCATTGCAGCGCGAGTTGGGCCACACCAGCACTCCTAGTAGGGGAAGAGGCCGAGGTAAAGGAAGAGGCCGAGGACGAGGGGTTCGAACTGTTGAAAGAGACATCATTCATCAGCAGGTTGAATCTGAGCCTTGCTCCTCTATTCAACAAATTAGCAATGATATGCCTAACACAAGTCTGCCAATAGATAATGGTGTGCAATCCAAGGAGTATACAAAGGAGACTTCTGCAGCTCATGAGGAAAGTGCTCAATCTTTCCGTAACATTGATCTGAATGCTAACTTAAACGAAAATGGAGACAAAAATGCCAGTGCAGCTGTTGAAGCTCCATTGCCTGAGCCTGCTGACATGGACATTAAACATGAAGAAATTCCAGGCTGGTCCCTATCGGATGCCGACAAGATGGCCATTGACACTATGCAACTGGCAACCCTCGCTAGTAGACTAGAAGAGGATGATGAAGATTATGATGAGGAAGGGTAAATAACATGCACCTTTGCAGGAAGCTCATGGTAACAGAAGAATAACCACTTACTGCTAGCACTATGATCACTATCTTCTAGTAATCACTGTATGTGTCCCATGCTAATGTGATGACCCATTTCTGATGATTCCTCTCTTTATCTATTCTGATATGTATCTGATCTTGTGTAGCAGATATAGATTTTCTTTTTCCTTAATTGTAATGCTAGCATCATGAACTTTTAGGATTTAAATGAATGTTTTTAGTTGACAACCGCAGTGCTAGTTCAGGATC