Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12045 LG3 9551458 9556341 PREDICTED: proline-rich receptor-like protein kinase PERK15
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 9551831 intron_variant
G/T 9551837 intron_variant
T/G 9551838 intron_variant
C/A 9551914 intron_variant
T/G 9551931 intron_variant
C/A 9551932 intron_variant
T/G 9551935 intron_variant
T/A 9552183 synonymous_variant p.Pro526Pro
G/T 9552460 intron_variant
A/C 9552800 intron_variant
A/T 9552823 intron_variant
C/T 9552873 intron_variant
T/A 9552874 intron_variant
T/G 9552892 intron_variant
T/C 9552896 intron_variant
A/T 9552910 intron_variant
G/A 9552912 intron_variant
T/C 9552950 intron_variant
A/T 9552964 intron_variant
T/C 9552976 intron_variant
T/C 9552984 intron_variant
A/C 9553021 intron_variant
C/A 9553025 intron_variant
T/C 9553046 intron_variant
A/T 9553050 intron_variant
T/C 9553063 intron_variant
C/T 9553098 intron_variant
T/C 9553103 splice_region_variant&intron_variant
T/A 9553115 missense_variant p.Thr450Ser
G/A 9553142 stop_gained p.Gln441*
G/C 9553247 missense_variant p.Leu406Val
T/C 9553282 intron_variant
A/G 9553300 intron_variant
T/C 9553784 missense_variant p.Glu260Gly
T/G 9554176 intron_variant
T/C 9554181 intron_variant
A/C 9554219 intron_variant
A/T 9554266 intron_variant
A/T 9554355 intron_variant
G/A 9554406 intron_variant
C/T 9554529 intron_variant
G/A 9554662 intron_variant
C/A 9554981 intron_variant
T/C 9554988 intron_variant
T/A 9555029 intron_variant
G/C 9555170 intron_variant
T/G 9555192 intron_variant
C/A 9555235 intron_variant
T/A 9555273 intron_variant
C/A 9555445 intron_variant
G/A 9555741 stop_gained p.Gln76*
T/A 9555922 intron_variant
C/T 9555989 intron_variant
T/G 9556016 intron_variant
G/T 9556019 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12045.1
MSAETQRVVVIQDASRDVSSKAILGALEKFSVKAGDQLIIVAILDWISSPMGYMVRVDSSSMMISTNQKIIGKWHTKKKKEYLMNEKIKEISNYCKLNEIGFQIEVLVGPTAEVASTAAKDFQATSLILFRQIHKDMKYFMRRHPCGMYRITSDNSIERLKDPKSTSSTKSLVDRQENVSYKEMFPGSEEEERSLQMSRSSSSDMLTSTGASSQWSTEVSNSSFGSFRYGHQDQEGNFYSNIEQETAGNRSLFHISENEEMNQSEVDKKEKHGRNTEKSHMEEEFTNPLCSVCNNRRPKVGLQIDFTYAELFAATKGFSPNNFLSEGGFGSVYKGLLNGMKIAVKQHKNAGFQGEKEFKSEVNLLSKARHENVVVLLGSCSEGTNRLLVYEYVCNGSLDQHLSEHSRSPLSWEDRINIAIGAAKGLLYLHKNKMIHRDVRPNNILITHDHQPLIGDFGLARSQNEDSIHSTEVVGTLGYLAPEYAEHGKVSSKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLKERNYPDLIDERIIKAHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDSIVRDYSPARSDSIYSASESDESEDEMKESFKCEDESPTRSSEFIDSNSTCQMMHMNLRQPPSPPIQSVSLSSSSSHYSHDESTSDGEALQISKSNEGSSIFRC*


CDS Sequence:
>Vu_12045.1
ATGAGTGCAGAAACTCAGAGGGTAGTGGTGATCCAGGATGCATCAAGAGATGTTAGTTCAAAAGCTATCCTTGGAGCCCTGGAAAAGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCCATGGGTTACATGGTCAGAGTTGATTCCAGTTCAATGATGATTTCAACAAACCAGAAAATAATTGGAAAATGGCATACCAAAAAAAAGAAAGAATATCTCATGAACGAGAAAATCAAGGAGATTTCCAACTACTGTAAATTGAATGAGATTGGATTCCAAATTGAAGTGCTTGTAGGCCCTACTGCAGAGGTTGCTTCTACTGCTGCCAAGGATTTTCAGGCCACAAGTTTGATTTTATTTAGACAGATCCACAAAGATATGAAGTATTTCATGCGCCGGCATCCTTGTGGCATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAACATCCAGCACCAAATCACTTGTTGACAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGAACGTTCTCTTCAGATGTCCAGGTCTTCATCGAGTGATATGTTGACATCAACTGGAGCCTCAAGTCAGTGGAGTACAGAAGTCTCCAATTCTAGTTTTGGAAGCTTCCGGTATGGCCATCAAGACCAAGAGGGAAATTTCTATTCAAATATAGAACAAGAAACAGCAGGGAACCGATCACTATTTCACATTTCAGAGAATGAAGAAATGAACCAATCGGAAGTAGATAAAAAAGAGAAACACGGTAGAAATACTGAAAAATCTCATATGGAGGAAGAATTTACAAATCCACTTTGTTCTGTGTGCAATAATCGACGACCAAAAGTTGGATTGCAGATAGATTTCACTTATGCAGAGCTCTTTGCTGCTACAAAAGGATTTTCTCCCAACAACTTTCTGTCAGAAGGAGGATTTGGATCTGTCTACAAAGGACTGCTTAATGGAATGAAGATTGCTGTCAAGCAACATAAAAATGCAGGTTTCCAAGGAGAGAAGGAGTTTAAGTCCGAAGTGAATTTACTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGTTCATGCTCAGAAGGAACTAATAGGCTTCTTGTGTATGAATATGTTTGCAATGGTTCACTAGACCAACATCTATCAGAACATTCTCGCTCACCTCTTAGTTGGGAAGATAGGATCAATATAGCAATTGGAGCTGCCAAAGGCTTACTATACTTACACAAGAATAAAATGATACACAGAGATGTGAGACCAAACAATATCCTTATAACACATGATCATCAACCATTGATAGGAGACTTTGGATTAGCAAGAAGTCAAAATGAAGACTCGATACACTCAACCGAAGTTGTTGGAACTTTGGGGTACTTGGCACCAGAATATGCAGAACATGGGAAAGTGTCTAGCAAAACAGATGTATACTCTTTTGGAGTGGTTCTACTGCAGCTAATAACAGGAATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAAAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTAAGGCTCATGATGTTCATCAACTATTTTGGATGGTTCGAATAGCTGAGAAATGTCTAAGCAGAGAGCCTCAAAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACTGACATTGTGGAAGGCAGAACATGTGACAGCATCGTAAGAGATTACTCCCCAGCAAGGTCAGATTCGATTTATAGTGCATCAGAGTCTGACGAATCTGAAGATGAAATGAAGGAATCCTTCAAGTGCGAAGATGAATCACCAACTCGCAGTTCAGAATTCATAGATAGTAATAGCACATGTCAGATGATGCACATGAATTTAAGACAGCCACCATCTCCTCCAATTCAGAGCGTCTCTCTAAGTAGCTCAAGCTCGCATTATTCTCATGATGAGTCAACTAGTGATGGTGAAGCATTACAAATATCAAAATCCAATGAGGGTAGCTCAATTTTTAGATGCTAG


Promoter Sequence:
>Vu_12045::LG3:9556341-9558341(-)
TATGTTGGTTGTATGAATTAAATTACCTAAGCTTACCCTTGCGTTTTCCTTGTGTTGTCTATTGTTTATGAACGTCCGTTCTGTCAATGCAATGATCATCCGTGTGGATGTGAGCAGATGGAGACACCCTTTTGGAGGAAGTGGTTGAAGAAGAAAACCTGGTGGACGTCGAAGTGAAGGCCGAGACTTAGATCGTCCAGTAGGATTAGTCTGCTTAGAATTTTTGTGACGTTCGGTTATTAGTTTTTTTGTAAAACCGTTCGTCTTGGTCCTTTGTTATTCTGTATTGATTTTTGGTAACGCTGTAGCTGTTTAACGTTCGGCTTTTGATAGCTGTTCTTTTAAGACTACACTGTTTAATTATGTAAATGTGATTAATTCTAATTTATGGTAATTACTATATTTTGGGATGTTACACTTAGAAATTAAGATCAAATAGAATTTAAATACTCATTTTATTTCTTACATGTCTCTTAAAAGACAAAACTAATCTATACTCTAGAATGGATAATACATTATATGTATATTTAAATATATGTTGATTAATCTTAACAATATTATTTCTCGAACTTAGAATCGATACATTTTCTATGTGGATTAATCCACTCCAATTTGGAAACTAAATGTGAGATGGACAGGTTCATATTGTTACCATAAATAAATAATATATCATACGTATGATAATTAATCTTAACAATTTAAAATATCACTTGTCAGTCCGATCTAAACATTTACTAATCTGAAGTCTTATATAGATTAATCCACTCCAATCTTTGGAAACTAAATGTACGATGGATAGGTTCATATTGTTACCATATACTTTAATCACAATTGAGTATCATAACATTGAAGAAAAAGTTGTGTAGCCTTTTATAACATTAAATTTAAAGGATGAAAAAAAAAATTAAATTACTGTTAATCTTTAAACAACAATTTTAAAGGATTAGACTTCATTTACAAGATTAAAATAATTTCCTTTTTTAAATGTAAGAAATTAAAATAGAATCCATTATGAATTTTGAAGACTAAAGTATAATGAAACCTTAAAATACACTATGAAATGATAGTGTCCATGCTGAATTGGTCTGTGTCTTAAATCAACAACACAAAAAAATGTCAGGACATAATGATGACCTAATCACACAACAACCAGCTATATAATAATTCTGTTCATGCAATTTTTTAATGAATTACTTTGCCTTGTCCAGCTCTTACACGTGCAAAGTCTCAACACTCTGTACTCAGAGACAGAACCAGAAAGAATAAACAAATCTCTTGCCAACAATGTTACATTTCTTGTCACACAGCATAGGTTATTCCACCACATTCTAAGCTCTTTCTTCCTGTTTTTGAGTCCAGCAATGTGTACAAAATTTCTTCAATGAATGCAGCATAAAAGTAAATGAAAAAGAATATAATATTCTCAAATTAGGCTAATAAATTCTCCTTGTTTCTCATTAATTGGAAAATGATTCAGGGCCCTTTGGATATGCTAATAATATTCTCTGCTACTGCTAACACTCTCTTGAGCTCTGATGCATCGATCACCACCCTTATCCTCTTGAATTTTGTTTTAACTCACTTCTCTATAAGTATCAACATGTGTCAGAGAAATAATAAGTTTGGAGAATTTGATATTCAATGTGTTTGATCTCAGAGGTCCCCTATTTTTTGTTTTGATAGAATTACAATATACAAATATGTTCCTTTATAGTTCTCCTAAAACCCTTTGTTTTCTTGACTATGTTTGTTCTAATATATTAAATCCTTGTTGTATATATATAATATCAGTCCCTTATAGTTAGTAGCTGATGATTTTCTTTTCACTGTTTCATATATAAGAAATATTTGGTAAAAGTTTGAAGCAATGCTGGGCATTTAGTGTTAAATCCTCTGGTCTAGGAATTGTACAGCTCCACATAAAATTTCTACACACCTTTTTTTGTGTGTCTAAAAACTTGTTAGAAACTTCAAGAGGAAGTCTTTGAAGCACAAAAACG


Gene Sequence:
>Vu_12045(-)
ATGAGTGCAGAAACTCAGAGGGTAGTGGTGATCCAGGATGCATCAAGAGATGTTAGTTCAAAAGCTATCCTTGGAGCCCTGGAAAAGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCCAGTATGTTTTCTTTTCTTCCAAGAAAGCCTAGTAAGAATTCACTATAATTTCTTTGTGCCTTGCCTTATTTGGTTTAAGGAAAGTAGAAAGTTAAAGAAAAGATTTGAAAGGAAAGAAATTAGAGAGACCAAAAGCTGTAGGATCCATATTTTGTTTTCATACCATGTTTTTCCTATTGAAAATGCATTAAGTTTCACATTGGATAAAAACGAAAAATTTGAACACCATATAAGAATCAAGACTCATAAACTCATAGTTTTAGGTTGAAAGTGATGTTAAAATACATAAAGTAAAGTCAAATTTTGAATAAGCCATTTTACTTACTAATTGTAATTGATGTTGCTGACTTATTTTTCACTTTTCTTCTCTTTAGTGGGTTACATGGTCAGAGTTGATTCCAGTTCAATGATGATTTCAACAAACCAGAAAATAATTGGAAAATGGCATACCAAAAAAAAGAAAGAATATCTCATGAACGAGAAAATCAAGGAGATTTCCAACTACTGTAAATTGAATGAGGTTAGCACAATCCATATACTTAACATACATTACTGAAATATCAAATAAGTATAGATAACACTTAACACAGTTAGAAAAGGGATTTGACAAGAAGTAGAGCAGAAAATGTATATACATATTTTGTGGTTTATTAACATCAATACGAATGTTTTATACATGTTCCCTTGTATAGATAATGATCTTGCGGATAAACTGAACAGACCTTTATACTGTTTAAGGAGAAAATGGTTAATGAAACTTTTCTTTCAATGATGTTTCACAGATTGGATTCCAAATTGAAGTGCTTGTAGGCCCTACTGCAGAGGTTGCTTCTACTGCTGCCAAGGATTTTCAGGCCACAAGTTTGATTTTATTTAGGTATGCTGCATATCGTTTTTTCTTGCTCTACAACAAACTTAAGAGGGAATTGAACATGTTTAGAGAACAAACACAAAATGTAAAAAAAAAAATCCCACTCTGAGCAGAAAAAGATGATGTCTAGGACCAAAATATAGGATCTTTCATTATTTTTCATCTTTTCAGAACTTAGTTATGCAGATTTATTTAAGCTGAACCTTGGACAACTGCTAATTTAAGGCCACTGTTAAGGAGAAATAGTTTCTCTAACAAAACCAGAAACTAGCTTATGATATCAAACTATCCATAGACCACTTATGCAATGTTATTTGTATAAACTATGTTAAAGTTATAGCATTTTGCCTCACTGCAGACAGATCCACAAAGATATGAAGTATTTCATGCGCCGGCATCCTTGTGGCATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAACATCCAGCACCAAATCACTTGTTGACAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGAACGTTCTCTTCAGAGTGAGTATTTCTTTTGGCATAACAATACTGTCTAAATATACAAATATATAGATTAATATTTCTATATTGTCATAGACAGGTTATGTTTTTTCTCTCTATTTCCCAAAACATAGTAGAAACAAATTGGAAAGGATAACAAACCTCATACAAAAATATCTTCAAAACCCCACCTATAATGTCAAAAACTTCTAATTAGATGAGTTGTAATAATATATTTCCATTTTGGTGTTGACTGGGCCAATTTTCATCACTTCTCAAATCTATAGAAATTTAAAGTCATGAAGATTCAATGATAACTTAGTAAATATTTACATGAATCTTGTGGGTGGTCAGTCTTGTCATGTAGTGAAAATCCTTGCCATAAACACAAGGAATCCTGGCGTTCTTCCAAACCCTATCTGTCAAAAAACTGCAAATATATCCAATAGTGGTCAAACGCTTTATGATAATTAAAGAAAGATGGTCAATATATGTTAACTTTGAATAGATAGTCTTTTGCTCAATCAATACTATCTACTTCCATTTCACATAGTGAAGATTCTCAATTTTTACTCAAGAATCATGCAAAGAAAAATTATGGTGCAAGTTTATCATTGTTGAGTTTTTGTTGAGGTAATAGTTAGTCACATTAACAAACGCTTGCTACATTCACTGCTAAATAAAACAGCTAAAGAACTTGAGTACAATCTCCATTAATTCAATGATGTGTGGTACTACTTAAATCCTATACATCTCTTTTTGATGATTAAATTGTACACCTGACTGTGATCAATGTTACATCAAGCAGTGTCCAGGTCTTCATCGAGTGATATGTTGACATCAACTGGAGCCTCAAGTCAGTGGAGTACAGAAGTCTCCAATTCTAGTTTTGGAAGCTTCCGGTATGGCCATCAAGACCAAGAGGGAAATTTCTATTCAAATATAGAACAAGAAACAGCAGGGAACCGATCACTATTTCACATTTCAGAGAATGAAGAAATGAACCAATCGGAAGTAGATAAAAAAGAGAAACACGGTAGAAATACTGAAAAATCTCATATGGAGGAAGAATTTACAAATCCACTTTGTTCTGTGTGCAATAATCGACGACCAAAAGTTGGATTGCAGATAGATTTCACTTATGCAGAGCTCTTTGCTGCTACAAAAGGATTTTCTCCCAACAACTTTCTGTCAGAAGGAGGATTTGGATCTGTCTACAAAGGACTGCTTAATGGAATGAAGATTGCTGTCAAGCAACATAAAAATGCAGGTTTCCAAGGAGAGAAGGAGTTTAAGTCCGAAGTGAATTTACTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGTTCATGCTCAGAAGGAACTAATAGGCTTCTTGTGTATGAATATGTTTGCAATGGTTCACTAGACCAACATCTATCAGGTAAGAAATCAGGATTTAACTTTAGTATTTTTTTGTTTCTTCTTATGTTATTCTTGATACAGCATTTTATAAGAGACTAACTTTTGTTATATTGATGTAGAACATTCTCGCTCACCTCTTAGTTGGGAAGATAGGATCAATATAGCAATTGGAGCTGCCAAAGGCTTACTATACTTACACAAGAATAAAATGATACACAGAGATGTGAGACCAAACAATATCCTTATAACACATGATCATCAACCATTGGTAATACACCGAGTCCTGAATCTACACATATTTCACTCATATGATACTAGCTACAAAATGACATATATTCAAATTTGCAAATAGCAATGATGCATCCAGGACTGCTTTGTAGGATATTAGTCCAAAGCATTGACAATGTTCAATTGTTGAATAATGGTAAAACATTTAAGAAAAGACTTATAGGCAGTACTTAATGCATTTGTGCAAATGAGAAAGAAAAATGATATGATAGCCAGAGAGCACTGTATAAGCTCACTGTTAATTCCATTAAGAAACTGAGCTTGATTGAAACTAACATTTTTCTTTCCTGGTGGATTTTTTAGATAGGAGACTTTGGATTAGCAAGAAGTCAAAATGAAGACTCGATACACTCAACCGAAGTTGTTGGAACTTTGGGGTACTTGGCACCAGAATATGCAGAACATGGGAAAGTGTCTAGCAAAACAGATGTATACTCTTTTGGAGTGGTTCTACTGCAGCTAATAACAGGAATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGTAACAATCTAAAGGCTATGAAATTTCAAAGTATCTTAATTTTCTAGTACTACCTCAGCTCATCAAAGCATCAACATGATGCAAATAAATTTCACGGATATGCTAAAATCTTTGTCCCTTTTGAATCTTTTCTTACAATCATTTAAGACACTATTTAGGCAGAATCGGTAGTTCAGTTATTCTAATTTGTATTTTTTTCAGTTGACCTTTAAGTACATGAACACAATCAACTACTATTGATAATGTTCTTTTTATTTTGACTTTATAGAAGTGTTGGGCCTGATTTATAAGTTTTAACTCCAACACTCAGATGAATAGACATAACTAAGTAATCCTAATAAGTTTGTCAATTAATATCCAAAAGAAAATTTCTTGCAGGCAAGGCCACTTTTAAAAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTAAGGCTCATGATGTTCATCAACTATTTTGGATGGTTCGAATAGCTGAGAAATGTCTAAGCAGAGAGCCTCAAAGGAGACTAAATATGATTCAGGTAGGCTACAATTTTGGAAATTGTCTTCTTTTTATATTACTTATAGCTTTGAAAAAGTTTAGACATATCCAGTAGTAAAGAATATGTTAGAGACAGTGCTAGATTAAATGAAAAACAATCATATATTGTTTTTCCTAACATTCATGATCAACTTGATAAAATGCATGAGAAGATTCCAAGGTGATGCTTTTTTATTTTCCTTGACTTCATATTTGTTACTACAGGTTGTTGATGCTTTGACTGACATTGTGGAAGGCAGAACATGTGACAGCATCGTAAGAGATTACTCCCCAGCAAGGTCAGATTCGATTTATAGTGCATCAGAGTCTGACGAATCTGAAGATGAAATGAAGGAATCCTTCAAGTGCGAAGATGAATCACCAACTCGCAGTTCAGAATTCATAGATAGTAATAGCACATGTCAGATGATGCACATGAATTTAAGACAGCCACCATCTCCTCCAATTCAGAGCGTCTCTCTAAGTAGCTCAAGCTCGCATTATTCTCATGATGAGTCAACTAGTGATGGTGAAGCATTACAAATATCAAAATCCAATGAGGGTAGCTCAATTTTTAGATGCTAG