Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12026 LG3 9244811 9245791 PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
C/A 9244892 splice_acceptor_variant&intron_variant
T/C 9244899 splice_region_variant&intron_variant
A/G 9245159 intron_variant
T/A 9245162 intron_variant
A/G 9245186 intron_variant
G/A 9245423 synonymous_variant p.Thr123Thr
C/G 9245516 missense_variant p.Glu92Asp
T/A 9245525 missense_variant p.Glu89Asp
T/C 9245545 missense_variant p.Ile83Val
T/G 9245567 synonymous_variant p.Leu75Leu
T/C 9245585 synonymous_variant p.Leu69Leu
G/A 9245628 missense_variant p.Thr55Ile
C/T 9245673 missense_variant p.Arg40Lys
G/A 9245687 synonymous_variant p.Asn35Asn
T/A 9245705 synonymous_variant p.Thr29Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12026.1
MECQDGGDKNEKHLLQQPLVRQNSLYGLTLNEVENELGERGKPVSSMNLDELLKTVYTVEENHSTKAGLSLTSSLCMKTVDEIWRDIQESKENKFEERQLRLGDIKLADFLVKAGVVVEASSTVVNPQQPQYQIPQQGLMGIYMTGQNIAQSLHTRATATSQDKTFERRQKRMIKNRESAARSRARKQAYTIELEHKISRLEEENQKLRRQKEIEDILLSVPPQKPRYQIRRTTSASF*


CDS Sequence:
>Vu_12026.1
ATGGAATGCCAAGATGGTGGTGATAAGAATGAAAAACATTTACTGCAACAACCTTTGGTGCGACAAAATTCCTTGTACGGTCTGACACTGAATGAAGTTGAGAACGAATTAGGTGAGAGAGGAAAACCAGTGAGTAGCATGAACCTTGATGAGCTTCTAAAAACTGTGTACACTGTTGAAGAAAACCATTCAACCAAAGCTGGTTTATCCTTAACCAGTTCTCTATGTATGAAAACTGTTGATGAGATTTGGAGAGACATACAAGAAAGCAAAGAGAACAAGTTTGAAGAGAGACAGCTTAGACTGGGAGACATAAAATTAGCGGATTTTTTGGTGAAAGCAGGAGTTGTTGTTGAAGCATCTTCTACCGTTGTTAATCCTCAACAACCACAATACCAAATTCCACAACAAGGTTTAATGGGGATTTACATGACTGGCCAGAACATAGCACAATCGTTACACACACGAGCTACTGCTACATCACAAGATAAGACCTTTGAGAGAAGACAAAAGAGGATGATTAAGAATAGAGAATCTGCTGCACGTTCTAGAGCAAGAAAACAAGCTTACACAATTGAATTGGAGCACAAAATCTCCCGTCTGGAAGAAGAAAATCAAAAGCTCAGGAGACAAAAGGAGATAGAGGACATATTATTGAGTGTGCCACCTCAAAAACCAAGATACCAGATTCGTCGAACTACATCAGCTTCATTTTGA


Promoter Sequence:
>Vu_12026::LG3:9245791-9247791(-)
TGTGAGTTGTCCTTTTCCGACTACATTACAACATCAATAATGTTATATATAAATAGATATATAAATAAAGTAATGATATTTTGACAACATTTTGATATAACATTTGTATTAATTTTTCATTAAATATAGGATACGGTAACACAATAATATATTAATACTGAGCCCGTGAGAAAATGACATGTGTATTGTGTTAAAATGTTATAGAAAAATATGTGATAAAATATTTTTTTCATATAAATATATGCATCCACTCACAACACACATTTGTATTTCTCAGCTTTGTGTTTTTGAGACACTCTCAAATCTCAATTTCATTCCTTTCTCCACTCATGAGATCGCTCTACACAAGGTAAACTTTTCATTCTACTTTTTCTTTTTCTTCCTTTTTCTGAAAACCGCCACACGCTTCAATATCTTTTCTCTTCTCATGTTAAAAATGGAGCTTGATCTCCTTTTGCCACTGAATTAATTGCATGTAAACCATTCTTTTTTGTGTTTTCATTTTTATTTTTTTGAACCCTTTTGCTCGTTTGTTTGTTTTTTTTTTCTTTTCAATTTTTCATTGTCTATCTGTTCTTATTTGTTTTCCATTTTTTACTTTAAAAGAAAATTGAGTGTATACTCTTAACTAAAGGGTTTTGGAGTGGAATTTCAAATAGGATCTTTTATCGTTTTAATTGTGGGGTTTAGTGTTTGAATGTGTATTTATTTGAGGTATATGTATTTGAGCATGGAGGCAAGTTATCAATGTTCTTAATGCACCCTTTGATGCTTATAAAGGGAGAAGCAATTTTTTTTTTCATGTGAGAATTTTGATCAAATTTCTAAGTGCTTATGCTTGTGTGATACGAAGGGAATAAGGTTTGGAAATGCATAATTTGTACTATATTAGAAAATGATGTCCTAGTCCAAATTTTATCACACTCTTTGATAACAGTTGTCATTTTGATATCATATCAATATGTTTTCATTTTTTTTAAGTAAAATGAAAATATTGTTAATTATGGGTTTTGTTCTTCTTGGATTGGTCTGAATGCTTCAAATTTCAAAATCATTAGGATGAAAGAACGTTAGTGCTCAACATTTTCATGCTTATGGATTCCTTTCTTTTTGGCCTCATTTTAACAATTAAGAGCTACAACAATGACTATAAAAGTCTTTTACCATTAGATGTATGATCTCATTGTTTTCCAATGTTTATTCCTAATAGAAATTAGTATTTTTCTTAATGCTTTTTACATACATCCATAAGAAATCATCACCCTTTATGTAAACTTTGTAAAATTTCACAAAAAAAGTCTCATAAAATATACAAAAAAAATCTACAACTATTCCATGAAAATTACATATTAATGTTTGAATGGATTGAGTTTCAACACAACACTTTGTTTGAAATATTATTTATTGAATAATATGTCAACACAAATTTCTTTTACAACATTGTGACACATCACACATGTTATTTTTTTCATTGAATTTAAAGTAAGTGAGTACAATAACAAAGAAATAATGAATCAATGAAAAAAATAACATATGTGTTTTATCAAAATGTTGTTGTCAAAATATTTTATTTTATTTTTATTTAAATATATGTTTGAAAAAGAGTTTAAAGAAGCTTCTTTCTTTCCAATGGACAAAAAACCCAAGTGACAATGTTACGTTTTTTTATCTCATGCTTATGAAGATGAAAAGTTTGTTGTTGGTCAATCGAGACATGTATGCTAAATTTTTAAAGGAATTGAAGAGCATTTATATCAAGGTTTTTATTCATAAGGGCATTTTTGATTGTATGATATGATGTGAAATGTGGAGCTGATCGATGTTGAATTCATATTTTGTGTTTTCTCAGGTTGAGTTTATATATAAGGTGGTTATGATTGAAGATATGTATTTGTTACTCTTACGTAAGAGTACAGTATTTTTGTCTTAGAAAAGTCGATTTTAGCTATCATAAAAAGTTCATATTGTAAGTTTGATGATTGGCTTTTGTGATCGAAATT


Gene Sequence:
>Vu_12026(-)
ATGGAATGCCAAGATGGTGGTGATAAGAATGAAAAACATTTACTGCAACAACCTTTGGTGCGACAAAATTCCTTGTACGGTCTGACACTGAATGAAGTTGAGAACGAATTAGGTGAGAGAGGAAAACCAGTGAGTAGCATGAACCTTGATGAGCTTCTAAAAACTGTGTACACTGTTGAAGAAAACCATTCAACCAAAGCTGGTTTATCCTTAACCAGTTCTCTATGTATGAAAACTGTTGATGAGATTTGGAGAGACATACAAGAAAGCAAAGAGAACAAGTTTGAAGAGAGACAGCTTAGACTGGGAGACATAAAATTAGCGGATTTTTTGGTGAAAGCAGGAGTTGTTGTTGAAGCATCTTCTACCGTTGTTAATCCTCAACAACCACAATACCAAATTCCACAACAAGGTTTAATGGGGATTTACATGACTGGCCAGAACATAGCACAATCGTTACACACACGAGCTACTGCTACATCACAAGATAAGACCTTTGAGAGAAGACAAAAGAGGATGATTAAGAATAGAGAATCTGCTGCACGTTCTAGAGCAAGAAAACAAGTCAGAATTCTCTTTCTTTTAAATGCTATCATATAGTATTTTGGTTAAATTCCTTATCATAAGTGAGATAATAATGAACAGGCTTACACAATTGAATTGGAGCACAAAATCTCCCGTCTGGAAGAAGAAAATCAAAAGCTCAGGAGACAAAAGGTTTGGTTCAGGTTCTAGTTTTTTGTTTTTTTTTTTTCACTTCTATTGATTCAAAATGATGAATATAGAAAGTCTTTCAGTATTTACAATTATTCTACCACCACTTTCTATATTGTATAACTTTCAATTGATATAAAAAATTATTAAAAAAAGTGATTTTTGCTTTGAAACATTGATTTTCAGGAGATAGAGGACATATTATTGAGTGTGCCACCTCAAAAACCAAGATACCAGATTCGTCGAACTACATCAGCTTCATTTTGA