Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11667 LG3 3873973 3876108 PREDICTED: calcium-dependent protein kinase 28 isoform X1
Map

Annotations  
category   relationship type   keyword
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
G/A 3874635 intron_variant
T/G 3874735 intron_variant
A/T 3874808 intron_variant
T/C 3874821 intron_variant
C/T 3874844 intron_variant
G/A 3874956 intron_variant
A/T 3874971 intron_variant
T/C 3875163 intron_variant
A/G,* 3875175 intron_variant
A/T 3875224 intron_variant
A/G 3875234 intron_variant
T/A 3875236 intron_variant
A/C 3875241 intron_variant
T/G 3875246 intron_variant
T/C 3875255 intron_variant
C/T 3875265 intron_variant
T/A 3875268 intron_variant
T/A 3875269 intron_variant
G/C 3875272 intron_variant
G/A 3875366 intron_variant
T/C 3875368 intron_variant
G/A 3875370 intron_variant
A/G 3875392 intron_variant
C/G 3875405 intron_variant
C/T 3875410 intron_variant
C/T 3875413 intron_variant
A/G 3875419 intron_variant
C/T 3875429 intron_variant
C/T 3875442 intron_variant
G/A 3875448 intron_variant
G/A 3875454 intron_variant
G/A 3875466 intron_variant
T/G 3875473 intron_variant
C/A 3875490 intron_variant
G/A 3875500 intron_variant
G/C 3875508 intron_variant
C/T 3875517 intron_variant
G/A 3875526 intron_variant
C/T 3875527 intron_variant
C/T 3875538 intron_variant
C/T 3875548 intron_variant
G/A 3875551 intron_variant
G/A 3875559 intron_variant
C/T 3875560 intron_variant
C/T 3875569 intron_variant
T/A 3875580 intron_variant
G/A 3875581 intron_variant
C/T 3875584 intron_variant
A/T 3875588 intron_variant
T/C 3875596 intron_variant
G/A 3875598 intron_variant
G/A 3875605 intron_variant
C/T 3875609 intron_variant
G/A 3875611 intron_variant
A/G 3875639 intron_variant
T/C 3875664 intron_variant
A/G 3875713 intron_variant
A/G 3875830 synonymous_variant p.Val93Val
C/G 3875832 missense_variant p.Val93Leu
G/A 3875840 missense_variant p.Ala90Val
C/A 3875841 missense_variant p.Ala90Ser
A/G 3875892 synonymous_variant p.Leu73Leu
A/G 3875985 missense_variant p.Cys42Arg
C/T 3876004 synonymous_variant p.Ala35Ala
G/A 3876008 missense_variant p.Thr34Met
T/A 3876009 missense_variant p.Thr34Ser
C/A 3876051 missense_variant p.Asp20Tyr
A/G 3876059 missense_variant p.Ile17Thr
T/C 3876090 missense_variant p.Thr7Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11667.1
MGICYSTTKVSGSNGNIVTDKKNRKRTVKPESPTAGANPERCKASARQVPCGKRTDFGYDKNFDTRYTLGKLLGHGQFGYTYEGINKANADRVAVKRIDKSKRERRADLGATKGDLAVGGQIWLSEGRSGRRRLRWRDEAESRRWW*


CDS Sequence:
>Vu_11667.1
ATGGGAATTTGCTATTCCACCACCAAAGTCAGCGGCTCCAATGGCAACATCGTCACCGATAAGAAAAATCGCAAGCGAACCGTGAAGCCCGAATCTCCGACGGCGGGGGCCAATCCCGAACGGTGCAAGGCAAGTGCGCGGCAGGTGCCATGCGGAAAGCGCACTGATTTCGGTTACGACAAAAATTTTGATACGCGATACACGCTGGGCAAATTGTTGGGACACGGCCAATTCGGTTACACCTACGAAGGAATCAACAAAGCTAATGCTGATCGTGTTGCCGTTAAGAGGATCGATAAGAGTAAGAGGGAGCGACGGGCAGATCTGGGCGCGACGAAAGGAGATCTGGCTGTCGGAGGGCAGATCTGGCTGTCGGAGGGCAGATCTGGGCGTCGACGGTTGAGGTGGCGCGACGAAGCTGAATCACGCCGTTGGTGGTAG


Promoter Sequence:
>Vu_11667::LG3:3876108-3878108(-)
TTTAATTTATTAGGGTACTAATGTAATCGATTAAAACAGACAGTTTTGTCCAGTTTTGTTTCATAAGAATTATGACTTACTTTAACATATTAAATTACTAACTTAATCAATTAATACTACCAGAATTATGCAAATTTGAACTATTTAAGCCAATTTCACTTATAAACACATGATATATGCATCTTATTGTTCTCCTATGATTTTAAGCAATTGTTCTATCAAAGTTATTGTGTAAGAGAGAACTTATTAATCAACTCATAGTCAAAAAACCTTTCATCAACTTGTGGAGACCAAAGTTCCCTTTCAATATCCTAGACTACTTGGTCCAAAATTATTCATATTCTAAAAACTTCATATTGACACAAGATGGTCCAAAAGAGAGAGAGTCTAGACTCATATTTCACAAAACGACTTCAACATTTCTTAAAAGTGTTTGACCATAATTAGAGGATATATCATAAACGATAGACTATGAACTATAATAGTGATTTTCAGACATATGAAAACACGACGAACCAAGAATGAGACTATTGTTGTTTGACAAAGGAGCACACAATAGAAAATGGAGACAGAATCGAAAACTCATCGTTCCAAGAAGAGATAGGCAGTGGTGTTTGCCAAAGATAAGCAACTAAGAGGCTGTGGTGTTCCACGATTTCGTCGCAACTGAGCAACTTTTGATTTAATGAACGCATAAAAAAACAATGAAATTATAATTTCTTTTCTAGCTCAAACATAAAAATATATTTTTTTAAAAAAATAAATGAATTACGGGTTAAGTGAACTCAACCTCACTTGAATATGCATAACCTATTAGTTGAATGAATCCAACCCATTTCCCCTTATAATTAAAAAAAAATTCAATTTCTCAATCAACCCGATTCAAATCCTCCGAATTAACAAACTAATTCTGACTTATTATCATTACATACATGGAACGAGATCTATTATCATATCTCACTGTATACTATTATTTGACATTATATACGATTAAAAATAAATATAAGTTGCGACAGTCGGTGAGTATTATTTTGATTAATTGAGTGTATATATATATATATATATATCTTTCTGATAAATATTTTAGCTTAAATTTTTTTTTGTATACTTTTCAACTCGTGTTTCTTTTCTTCTTTTATTCATTCTCTATATCAAGTTTTTGATTCATGCATTTACTTTTCCATGATTTTACATTGCTTTTTTAATTTATGTTTCTCACGTTTACATTTCAAGTACTTTTTTATCTTTTTGACCACTTTACTAAATATCTGACCTCTTTCTCTTTCTAACATGATTTCTTAAAGTTTTGCATTTACAATCTAAGCTCTTGTTACATTCTAACGATATTTTTTTCCCTTTGCATTTTGTTAATTTTAACCTTTATTCTGTACAATTTTGAATTAATCTGATTTAATATTTTTAGGGTTAAATATGTTTTTCGTCCCTTTAAGTATCACACGATTTTGGTTTTAGTCCCTACTCGAAACTTTGATGGTTTTTAATCCTCGTAGTTTTGAAACTATTAGTATTAGTCCTTAAAAATGGACGGCGTTAAGTTTTAGTAGATGTGGCAAACAATGATGCCCAGCTGCGCTCTGCACTCTCTGCCACGTTGCTGGCCAATAAGAATCTGACACTCACGTGGTCATTCTCGTTCTTCCTCCCTCACCTGATGACGGCGAAGATCTAGGTTTTCGCTACACTGCTCCCCCGCCTCTATCTCTCTCCAGGAACTCTGCTAAGTCCACTACAACTCTCAGATCGCCAGACCCCGTCCCGTTATCGCTCTCGTTCAAAGGTCCCTTTTGACCTTTCTTTCGCCCTTTTCTTCCCTTCTTCCTGTGCATCCCAGTTCACACCCGTCTCTTTCTTTGCCAAACGAATCACAAATGCAAGTGCTTTAATTACTATTATTATTATAGTTAGATAGATAGATATTTTAACTTTTTTAAAGCTCCTCGTGATTTTCATCTTTTAAGCGTGTTCGACCCTCTCCGACC


Gene Sequence:
>Vu_11667(-)
ATGGGAATTTGCTATTCCACCACCAAAGTCAGCGGCTCCAATGGCAACATCGTCACCGATAAGAAAAATCGCAAGCGAACCGTGAAGCCCGAATCTCCGACGGCGGGGGCCAATCCCGAACGGTGCAAGGCAAGTGCGCGGCAGGTGCCATGCGGAAAGCGCACTGATTTCGGTTACGACAAAAATTTTGATACGCGATACACGCTGGGCAAATTGTTGGGACACGGCCAATTCGGTTACACCTACGAAGGAATCAACAAAGCTAATGCTGATCGTGTTGCCGTTAAGAGGATCGATAAGAGTAAGGTATTTTCGTTCATGTCATCGTCGTTTAAGTCATGACTCTTACGATTACGAATGAAAATTGATTGGAATTTAGTGCTTTTGATTCTTTGTTGTATGTAATGTTAGGAATTGATTTTTGATTTTTTGATTCTTGAATTTAATGGCAGATGGTTCAGCCTATAGCTGTTGAGGATGTTAAGCGAGATGTTTAGCAGAATCGGACCGCGACAGGAGATGGCGATCAGAGAGTTGTAGTGGACTTAGCAGAGTTCCTGGAGAGAGATAGAGGCGGGGGAGCAGTGTAGCGAAAACCTACATCTTCGCCGTCGTCAGGTGAGGGAGGAAGAACGAGAATGGCCACGTGAGTGTCAGATTCTTATTGGCCAGCAACGTGGCAGAGAGTGTAGAGCGCAGCTGGGCATCGTCGTTTGTCACATCTACTAAAACTTAACGCCATCCATTTTTAAGGACTAATACTAATAGTTTCAAAACTACGAGGATTAAAAACCATCAAAGTTTCGAATAGGGACTAAAACCAAAATCGTGTGATACTTAAGGGAGGAAAAACATATTTAACACATATTTTTATTCAAAGCAGTTGACTATGCATGATAAGCCTTTTAAATGTGGAAATTGCTGATATATCAATGTCTCATCATGAAGATTTGAATGAACTGATCTTGAGATTCGATTTGCATCTTATGTACTTTGTGATTGCCACATTAATTGGACTAATAATTTATAATTAAATTTTTTAACCTCATCTTAGTAGATAAAGTAATCAACTCTTCATCATAATTTGAATTACTCAACCACATCGCATTCAATTCAGTTATTTGTTCTTATTTCTTCTAATCATAGTATTCACTTTTTTTTCTCACATTTATCAAGTGTGCCTAAATACTTTTGAAACAAAAAATGTCACTCATTTAACACTTCGTCTCTAATGGTATTGGAGGAAGGACCATTTCGATAAACAGATATATAACCATATGAATCAACATATGCTTTAAATTAATAAGGTCTCTATTTAGTGTTTACCTATTAATTAACCTTTTCTACATTATATTTTAATTTAATTTCTTTGTATTGAACACTTTGCAAAACTCAATTGACACTAGTAAAAAATCACGTTTTAAACTCGGACATTATGACTCGGTTTTTATGGAACCGAGGTATATCAAAAGGCGGTGGCAGACTCGTAATTTTAAAAACATTATATGCCTCGGTTGTTAGGCAACCGGTGTCTAAAGAAGATACTGATTCGGTTCCAAGAGTGAACCGAAACCTAATCCTCGCATATCAAAGATACTGCCTCGGTTGGAAGATAGAACCGAGGCATATTGGGCTTGTGTGCGCGCCTTATATCCAGAGCCAGAAATTTTGGGCCCGAAAATTCTCCTCCTCTTCCCCTCTTCTCTTCCTCTTCTCTTCTCTTCTCCTGCGATACCCCACCTCTTCTTCTCTTCCTCTTCTCCTGCAACGTGCGACGACGGTGGACGGAGCGAGGACGCGGCGGTGGCGGCGAGGACGCGGCTGCGGCAAGGACGCTCTTCTCTTCTCCTGCAACGACCTCTTCTTCTCTTCCTCTTCTCCTGCGACGTTCGATGACGGTGGACGCGAGGACGCAGCGAGAACGTGGCGGCGGCGAGGACGCGACGGCGAGGACGCAGCGGTGACGGAGGGAGGTGACGGTGGGCAGAGTTGCGCTCATAGAGGGAGCGACGGGCAGATCTGGGCGCGACGAAAGGAGATCTGGCTGTCGGAGGGCAGATCTGGCTGTCGGAGGGCAGATCTGGGCGTCGACGGTTGAGGTGGCGCGACGAAGCTGAATCACGCCGTTGGTGGTAG