Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11529 LG3 2304756 2305073 receptor-like protein 12 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
Cellular Component   located in   mitochondrion, extracellular region, extracellular region
SNP Position Effect Amino acid change
C/G,* 2304756 stop_lost&splice_region_variant p.Ter106Tyrext*?
A/*,T 2304758 stop_lost&splice_region_variant p.Ter106Lysext*?
G/C 2304767 missense_variant p.Pro103Ala
A/G 2304780 synonymous_variant p.Tyr98Tyr
C/T,A 2304790 missense_variant p.Gly95Val
T/A 2304793 missense_variant p.Tyr94Phe
A/T 2304796 missense_variant p.Leu93Gln
A/G,T 2304802 missense_variant p.Met91Thr
C/T 2304805 missense_variant p.Gly90Glu
G/C 2304808 missense_variant p.Thr89Ser
G/T 2304817 missense_variant p.Thr86Lys
A/G 2304832 missense_variant p.Leu81Pro
G/T 2304835 missense_variant p.Ala80Glu
C/T,A 2304865 missense_variant p.Ser70Ile
A/G 2304913 missense_variant p.Leu54Ser
C/G 2304929 missense_variant p.Val49Leu
A/G 2304930 synonymous_variant p.Tyr48Tyr
A/T 2304948 missense_variant p.Ser42Arg
C/G 2304987 missense_variant p.Leu29Phe
A/T 2304988 stop_gained p.Leu29*
T/C 2304998 missense_variant p.Asn26Asp
C/T 2305003 missense_variant p.Gly24Asp
A/G 2305030 missense_variant p.Val15Ala
C/A 2305065 missense_variant p.Leu3Phe
A/G 2305067 synonymous_variant p.Leu3Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11529.1
MELCGKKAWLVLMGVMVVLGHVLGTNGCLEEERNALLDFKASYGNESYVLPSWLNDPKSNCCSWERVTCSSSSGHIIHLALGNLHTKETGMELYGFPYGEMGPYR*


CDS Sequence:
>Vu_11529.1
ATGGAGTTGTGTGGGAAGAAAGCGTGGTTGGTGTTGATGGGAGTAATGGTAGTTTTGGGTCATGTGTTAGGCACAAATGGTTGTTTGGAAGAAGAGAGGAATGCACTGTTAGATTTCAAAGCTAGTTATGGCAATGAGTCATATGTGCTACCTTCGTGGTTGAATGACCCAAAGAGCAATTGTTGCTCCTGGGAAAGAGTCACGTGCAGTTCATCTTCTGGCCACATCATTCATCTCGCACTTGGCAATCTTCATACAAAGGAAACTGGAATGGAACTATATGGATTTCCATATGGTGAAATGGGACCATATAGGTAG


Promoter Sequence:
>Vu_11529::LG3:2305073-2307073(-)
GTAAGATAAAAATATTATATTTTGAGCTATAAATTCGCGCTTGACTCCCCTTGAAAAACTGTTTGTATTAATGTATGGATGATATCTTTTTCTCGGTGTCAAGATTTGCTCATCAAATTGTAGTGTTATGTAATTCTTTATAACGAAAGTGAGTAATACTTGTTCTTTTTTCTTCTTGCAGTTTGGGGTGTATGCAATCATGCGTTTCATTTGCACTGTATCCTGAAATGGGTTAATTCTCAAACATCACAAGCGCATTGCCCAATGTGCCGTCGTGAATGGCAGTTTAAAGGATAAGAGCATTGGCTTTTTCCCTTAAGGGTGACTACTAAACATTGTAAATGTGGTCTTGTTAATTTGAATATACTTCAATTTTACCATGCATATAAATGTACTGGATTGTGATTAGTGTTGTATTGTGCCTCTTCATGGATTGTAGGGTTCTTATTTATATTTAGTTATTTCTTTTTATCATGATTATGCCAAAATTAAGGAGTGTCATGCCTGATTTTTCTCATATAATTAATCTATGAATTGGACTTTTTCTTACCCAATTTAGATAGGGCCCTTCAATGATTTGGGATTATTCTTTAGTAAATTTTATGTGCTGATATCTTTACATTATTGGAATCCTCGTGTTACTTATTTTTATTTGCAGAAGATTTGGTATTTCTTTTGTTAGTCTCCAAATAGGGGCGATCTCTTAATTTGGTATAAAATCTGATACAATATTTTCCTATTATATTGTCTGCTTGATTGTAATTTTTGAAATAAATTTCCTAACAATATTTCAAATATGTACGCAATATTTTGTTATTTTTTTTATTATTCACACTAATACATTGTAGTTTCCTAAATTGGTTTGGTGAGCGTTTGAAGATTCAACAGGTTCCTCAGTCTTGGCAGTGTTGGCCCGGAAACAAAAAAAATCTAATCAGAAACAGGTTTTTCTGAGGCAACATCTAACTACAGAATTACTAAAAAGTCACGTTTAGACATTAGTAACATATTATTACGTGTGTAGATGTAGATTGTGATTTGTAAGTACCATGTTTCATAATGAAGTCTCAAGTATTTGAAGCATGAAACTGCCCTTGCGATGTAATTTTATTGTGGGTGGTAATCTCATGTTTTTCTTTTATTATTATTTTTTTAGTTTTTTAATAAAATCTTTATATAATGTTAGCGAGATAATAACATAAACTTACTTGGAAAATGCAAACCTTGTTGACTTTTGTGGAAAAAATGCTCGACAAAGAAATATAGTATTATAAGTTTCAAATTCTCATGGGTTGAGACATCCCTAATATCTCATTATTTTAGTTATATATTAATTATTATCGATAAAGAAAAACAAATCATTGTTGATATTATACTGACTAATATTTATTTATTAAAAAAAGTTAAAAATAATTTTTTAACATTTTTTAAAAAGAACTGGACTTTGTGTATTGCGTGAATATCAAGAAACCATTAAACTAAAATCACATTTTAGTCAACACTGATATTTAAAAATTAATTTTATATTTTATTGTAGTATCATAATTTTGCATAATAACAAGTGTCACAGACTTTAGAGGAGGACCCTCTAGAGACCTGGTCAACCTCACAAGCGCAGCAAAATTGTTTAAATATAATCATGACATGGATATGTTAACACAAGTCGGACAATCTGGAATCTAATTTAATATATTTTCGTCATGACATAAGGTACCCGTATTGACGTTACAGTATCGTCAAGAGCAAACAAATACTTATCTTTCTAAGTAGTGTGTGGAGACACGGTTTTATTTGTAATCACGCACTCGGACAGGTTTTTGAGACATGCAGAAGATTTCCATCCACTCATGAATCTTTCTAGGGTTTATCTCGCTATTTTTATTCAATGGTTGAGTAGCAATCGTATGTCGCGTTCCAATTTTGCCAAAATGTTAAGAGGGTGATTGCTATATATGCACATTACAAATTGTAAAGTAGTAATTTTGAAGTCATTCTTCCAT


Gene Sequence:
>Vu_11529(-)
ATGGAGTTGTGTGGGAAGAAAGCGTGGTTGGTGTTGATGGGAGTAATGGTAGTTTTGGGTCATGTGTTAGGCACAAATGGTTGTTTGGAAGAAGAGAGGAATGCACTGTTAGATTTCAAAGCTAGTTATGGCAATGAGTCATATGTGCTACCTTCGTGGTTGAATGACCCAAAGAGCAATTGTTGCTCCTGGGAAAGAGTCACGTGCAGTTCATCTTCTGGCCACATCATTCATCTCGCACTTGGCAATCTTCATACAAAGGAAACTGGAATGGAACTATATGGATTTCCATATGGTGAAATGGGACCATATAGGTAG