Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11527 LG3 2289186 2290614 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 2289193 missense_variant p.Tyr335Cys
A/G 2289198 synonymous_variant p.His333His
G/A 2289234 synonymous_variant p.Asp321Asp
A/G 2289260 missense_variant p.Trp313Arg
C/T 2289271 missense_variant p.Ser309Asn
G/C 2289299 missense_variant p.Leu300Val
G/C 2289309 synonymous_variant p.Val296Val
G/T 2289416 missense_variant p.Arg261Ser
G/A 2289519 synonymous_variant p.Asn226Asn
G/T 2289541 missense_variant p.Ala219Asp
G/A 2289555 splice_region_variant&synonymous_variant p.Cys214Cys
A/C 2289567 downstream_gene_variant
T/A 2289593 downstream_gene_variant
A/G 2289616 downstream_gene_variant
T/C 2289685 downstream_gene_variant
C/T 2289691 downstream_gene_variant
T/G,C 2289708 downstream_gene_variant
C/G 2289759 downstream_gene_variant
T/C,* 2289779 downstream_gene_variant
G/T 2289827 synonymous_variant p.Leu212Leu
T/G 2289839 synonymous_variant p.Ser208Ser
A/C,G 2289841 missense_variant p.Ser208Ala
A/G 2289843 missense_variant p.Leu207Ser
T/G,* 2289850 missense_variant p.Asn205His
T/A 2289853 stop_gained p.Lys204*
G/C 2289866 missense_variant p.Ile199Met
G/T 2289873 missense_variant p.Pro197His
G/A 2289885 missense_variant p.Thr193Met
A/C 2289945 downstream_gene_variant
T/A 2290147 synonymous_variant p.Thr156Thr
T/G 2290154 missense_variant p.Asn154Thr
T/A 2290239 missense_variant p.Met126Leu
G/T 2290254 missense_variant p.Gln121Lys
C/T 2290292 missense_variant p.Arg108Lys
T/G,C 2290293 missense_variant p.Arg108Gly
A/G 2290306 synonymous_variant p.Tyr103Tyr
T/A 2290307 missense_variant p.Tyr103Phe
A/T 2290312 synonymous_variant p.Leu101Leu
G/A 2290330 synonymous_variant p.Thr95Thr
A/G 2290338 synonymous_variant p.Leu93Leu
T/C 2290339 synonymous_variant p.Leu92Leu
A/T 2290344 missense_variant p.Ser91Thr
A/G 2290353 missense_variant p.Phe88Leu
G/A 2290357 synonymous_variant p.Asn86Asn
C/G 2290363 missense_variant p.Glu84Asp
C/T 2290365 missense_variant p.Glu84Lys
A/C 2290366 missense_variant p.Ile83Met
G/A 2290370 missense_variant p.Thr82Met
G/C 2290376 missense_variant p.Thr80Arg
C/G 2290380 missense_variant p.Glu79Gln
G/T 2290387 missense_variant p.Phe76Leu
T/G 2290404 missense_variant p.Ile71Leu
C/T 2290436 missense_variant p.Ser60Asn
C/A 2290438 synonymous_variant p.Gly59Gly
T/C 2290441 missense_variant p.Ile58Met
A/T 2290444 synonymous_variant p.Leu57Leu
A/T 2290445 missense_variant p.Leu57His
C/G 2290452 missense_variant p.Glu55Gln
A/G 2290454 missense_variant p.Val54Ala
A/T 2290522 synonymous_variant p.Ile31Ile
T/A 2290524 missense_variant p.Ile31Phe
T/G 2290526 missense_variant p.Glu30Ala
A/G 2290558 synonymous_variant p.Pro19Pro
G/C 2290573 missense_variant p.Phe14Leu
G/A 2290586 missense_variant p.Ala10Val
A/G 2290598 missense_variant p.Val6Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11527.1
MDQMTVLSIANNKFQGELPNNVGFFFPRLEILDASNNKFDGPIPASIGEMSSLVELLIGSNNFSGNVPEYILNRCFSLETLTIENNQFNGSLLSTIRKLRLTYLAASRNNIEGAITDEWCQHELFMLDISYNKFSGALPSCFKTPGYLLLQGNNFTGTIPELFMSNHYRAVAIDFSDNNGSIPACFSNMSFGNVTGPFYPTDREKPFITGRPLVDLHYLAVFNVSYNNLSGRALEKGQFCTFDGSSYKGNPYLTWDTCKSERSKPPLRPTLLPGEVEEENSEIDFNVFCWSFAACYVMVILALVTLLWFSPHCWRMWFYFVDVCLRKCFGQFLHGYH*


CDS Sequence:
>Vu_11527.1
ATGGATCAAATGACAGTGTTGTCCATAGCAAACAACAAATTCCAAGGCGAGCTCCCTAACAACGTTGGATTCTTCTTCCCACGTTTGGAGATTTTGGATGCCTCAAACAATAAGTTTGATGGTCCTATTCCGGCTTCAATTGGAGAGATGTCAAGCTTAGTGGAATTGCTTATAGGGAGCAATAACTTTTCTGGCAATGTACCTGAGTACATTCTTAACAGATGCTTCTCATTAGAAACATTGACGATTGAGAATAACCAGTTCAATGGATCACTATTGAGTACCATCAGAAAGCTTAGGCTTACTTATTTAGCTGCGTCAAGGAACAACATTGAAGGAGCAATAACAGATGAATGGTGCCAACATGAGTTGTTTATGTTAGACATATCTTACAATAAGTTCTCTGGTGCACTGCCCTCCTGCTTCAAAACGCCAGGTTACTTGCTCCTGCAGGGAAACAATTTTACAGGCACGATACCTGAATTATTCATGAGCAACCACTATAGAGCAGTAGCCATTGATTTTAGTGACAACAATGGGTCCATACCTGCTTGCTTCAGTAATATGTCATTCGGAAACGTTACCGGTCCCTTTTATCCTACTGATAGGGAAAAACCATTTATCACTGGACGTCCTCTTGTGGACTTGCACTATTTGGCTGTCTTCAATGTTTCCTACAACAATTTGTCAGGAAGAGCACTTGAAAAGGGACAGTTTTGTACCTTTGATGGGAGTAGCTACAAAGGAAATCCGTATCTTACGTGGGATACCTGTAAAAGTGAACGTTCAAAACCACCACTACGACCAACTCTGTTGCCTGGTGAAGTAGAAGAAGAAAACTCTGAAATTGATTTCAATGTCTTCTGTTGGAGTTTTGCTGCATGTTATGTCATGGTAATCCTAGCGTTGGTGACACTCCTTTGGTTCAGTCCTCATTGCTGGAGAATGTGGTTTTATTTTGTCGACGTGTGCCTTCGTAAATGCTTTGGTCAATTTCTTCATGGTTACCACTAA


Promoter Sequence:
>Vu_11527::LG3:2290614-2292614(-)
TAAGATGAACAACGGTATGAAGGGCTACTCGTGATTGTGGTTGGTTGGGAATGCTTTCGCTGGAGGGAGAAATGCACTATGTGGAAGAGACTCATCCTTGAGGGGGAGATTGTTGGAAATTCAAGTGTGAGTCCAAGTCCCACATTGGATAGAAATGAAAAAATAGAAGCACTATATAAAGGGGAAAGGCTCATTAACCCATTATCTTAAGGTTTTGGGAAAGAGTGGTATCAATCCCTTATATGATTGAGGTCATATGTCATTAGTGTTTGTGGTTCCCAGGTGAATCTCCTCCTCAATAGACCCACGATTATCAATGAGATTTTTATATTAAGGTTAAAATTAATAAAAGGTAAATATCGATCACAAAGATAAAATCTTGCAAGACACAATGTCATCATGAGATTTTTAGATTGTTAGTTGGAAGTACAAGAGTGAATCTTGAGTTAAAGTTTCATATCATCTATACTAAACTCATAACCTAACTCGTACAAAAGTTAATTTGAATTAGGTCAAATTTGACAAAATAATAAATAAAACTCAATCCGGTCTTATTGGCTAAGTCATGTATTTACAAACTACAACGTAACGTTTGTGTAATTTTATTTGCTTACCGTCTTTTTTAACAAACCTTATCAATTAATCACAGGTTACGCGACGTGGACGGAAGCTGATTAAAAATAACCATCTATTTGCAAACCTATTTATATTGCTAATTCACATGGATTATAGAAAAATTATTAAATTAATTTTATAAGAAATTTCAAAAAATTGTCTAAAGGATACAAAATTCTGCATTTGTTTTTCTAGCTGCAACAGTGATGTAATTTAATCAATACCTATAATAAACTAACACAATATTTCAGATGCCCATAGCGTTGAGTTCTATGTATTCAAGAAGTTGAAGACACTTAACTTAGCTGACAATTATTTGGACAAGGGAATATTGAAGTCGTTAGTTGCTTTCCCCGCTCTCAGATTTTTGGACCTAGGTTTTAATCCAATCAAAGTGGATCTTGATGAAAAAGGTATGTTTGCCCTACGATATTTCATTCTTTAACTTTGATTTCTGCATTTGAAGTATCAATTAAGAGTATGTATAAGCTAATAATATTGGTAAATAACCTCTTTTATTCTTTGCTGAAGTTTTGTCTGATCTAAGCAAACTGGAAGTTCTTCACCTAAGTAACGCAGGTATCAATGGAATTTTACCAAATCAAGGTGAGTATGTATCATTTATGTGATTCTTTTTGTCCTTGTTCCAAATCTAATATACGTATACATTAGTAGCATATACTTTAAGTGTATTATTATCATAAGAGTTTAATAACTATACTTGTTGAATTATCAATCAATTAAAAATCACTCTCATGAATTTAAGGTAGTTGTAAAAATAAATTTAAAGACATAGTAAACAATAGATTTTTTTTTTCTTAAATAACATAACCTGTCACTGTCTGAATATAGGTTTATGTAAAATGAAGCAACTTCGGGAACTAGATCTGTCATTCAATAATCTGAGAGGAACTTTGGATGCATGCCTTGAAAACTTGACATCATTTCGCTATCTTGATGTCTCCTTCAACTACTTAAGTGGGAATGTGACACCCTTCCTTGCTCAACTAACATCTGCCGAATCTCTTAGCATTCGATCCAATAACTTTGAGGATATATTCTCATTCAACTTTTTTGCCAACCATTCAAAACTTAAGAATTTGATGATTGGGAATATGAAAGTGGAAACCGAAAATCCGCCTTGGGTTGCATCATTTCAGTTGGAAGGACTCCAAATGTGCGGTTGTGAGTTAAACTTACCAGCAGAAATTCCAACTTTCCTTTCAAATCAAACTAGCTTGAGATTTCTTGATTTATCAAGAAATAACCTTGTTGGTAAGTTTCCTAGCTGGTTGCTCATGAACAACACAAATTTAGAAGAAGTCTACTTATTTGATAATTCTTTCACTGGACCTTTTGAACTACTCTTTGATAAAAATCATCGC


Gene Sequence:
>Vu_11527(-)
ATGGATCAAATGACAGTGTTGTCCATAGCAAACAACAAATTCCAAGGCGAGCTCCCTAACAACGTTGGATTCTTCTTCCCACGTTTGGAGATTTTGGATGCCTCAAACAATAAGTTTGATGGTCCTATTCCGGCTTCAATTGGAGAGATGTCAAGCTTAGTGGAATTGCTTATAGGGAGCAATAACTTTTCTGGCAATGTACCTGAGTACATTCTTAACAGATGCTTCTCATTAGAAACATTGACGATTGAGAATAACCAGTTCAATGGATCACTATTGAGTACCATCAGAAAGCTTAGGCTTACTTATTTAGCTGCGTCAAGGAACAACATTGAAGGAGCAATAACAGATGAATGGTGCCAACATGAGTTGTTTATGTTAGACATATCTTACAATAAGTTCTCTGGTGCACTGCCCTCCTGCTTCAAAACGCCAGGTTACTTGCTCCTGCAGGGAAACAATTTTACAGGCACGATACCTGAATTATTCATGAGCAACCACTATAGAGCAGTAGCCATTGATTTTAGTGACAACAAGTTTACTTGGAACAATACCTGATAGTGTATACAAGCTTTGGTCTTTAAATTTTCTTTTATTGGCTGGTAATCACTTGCAAGGCCAAATTTCCAGTCAAATATGCCAATTAAAACATATCAATATCTTAGACCTTTCGAAAAATAATTTCAGTGGGTCCATACCTGCTTGCTTCAGTAATATGTCATTCGGAAACGTTACCGGTCCCTTTTATCCTACTGATAGGGAAAAACCATTTATCACTGGACGTCCTCTTGTGGTAATGCAACTCAGAACAAAAAATTTATATCTTTCCTTCGGCAGTGATAGATATCAGTTACTGTCCGAACTAGATTTGTCATGTAATCAATTGACAGGAGAGATTCCACACGAATTAGGAGATCTACATGGCCTTCATTCTCTCAACTTATCTCACAACCATCTAAATGGTCTGATCCCAGAGAGCTTCCAGAAGCTACAAAACATAGAGAGTTTAGATATTTCAAATAACAACCTGAGTGGACAAATCCCTCTTCAGTTACAGGACTTGCACTATTTGGCTGTCTTCAATGTTTCCTACAACAATTTGTCAGGAAGAGCACTTGAAAAGGGACAGTTTTGTACCTTTGATGGGAGTAGCTACAAAGGAAATCCGTATCTTACGTGGGATACCTGTAAAAGTGAACGTTCAAAACCACCACTACGACCAACTCTGTTGCCTGGTGAAGTAGAAGAAGAAAACTCTGAAATTGATTTCAATGTCTTCTGTTGGAGTTTTGCTGCATGTTATGTCATGGTAATCCTAGCGTTGGTGACACTCCTTTGGTTCAGTCCTCATTGCTGGAGAATGTGGTTTTATTTTGTCGACGTGTGCCTTCGTAAATGCTTTGGTCAATTTCTTCATGGTTACCACTAA