Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11431 LG3 891638 894262 PREDICTED: putative disease resistance protein RGA3
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 891648 missense_variant p.Ile392Leu
G/A 891664 synonymous_variant p.Ile386Ile
A/T 891667 missense_variant p.Phe385Leu
G/T 891677 missense_variant p.Ser382Tyr
G/A 891692 missense_variant p.Ser377Phe
G/A 891701 missense_variant p.Ser374Leu
T/A 891729 stop_gained p.Lys365*
C/T 891739 synonymous_variant p.Glu361Glu
C/T 891742 synonymous_variant p.Lys360Lys
T/A 891744 stop_gained p.Lys360*
G/C 891753 missense_variant p.Gln357Glu
A/C 891758 missense_variant p.Ile355Ser
A/T 891788 stop_gained p.Leu345*
G/A 891791 missense_variant p.Thr344Ile
T/G 892057 synonymous_variant p.Ile255Ile
C/T 892062 missense_variant p.Gly254Arg
T/C 892063 synonymous_variant p.Gly253Gly
T/C 892078 synonymous_variant p.Val248Val
A/G 892155 synonymous_variant p.Leu223Leu
A/C 892157 missense_variant p.Met222Arg
T/G 892173 missense_variant p.Ile217Leu
C/A 892174 missense_variant p.Trp216Cys
C/A 892197 stop_gained p.Gly209*
T/C 892249 synonymous_variant p.Leu191Leu
C/T 892259 missense_variant p.Cys188Tyr
C/T 892293 missense_variant p.Asp177Asn
T/C 892362 missense_variant p.Thr154Ala
C/G 892405 missense_variant p.Lys139Asn
T/C 892457 stop_lost p.Ter122Trpext*?
A/G 892551 downstream_gene_variant
A/C 892553 downstream_gene_variant
T/A 892589 missense_variant p.Gln112His
A/T 892609 missense_variant p.Cys106Ser
A/C 892610 missense_variant p.Phe105Leu
G/T 892618 missense_variant p.Gln103Lys
A/T 892619 missense_variant p.Ser102Arg
T/A 892662 downstream_gene_variant
A/T 893015 downstream_gene_variant
T/A 893094 downstream_gene_variant
G/T 893095 downstream_gene_variant
C/G 893121 downstream_gene_variant
T/C 893234 downstream_gene_variant
T/C 893240 downstream_gene_variant
A/T 893244 downstream_gene_variant
A/T 893245 downstream_gene_variant
T/A 893251 downstream_gene_variant
G/T 893360 downstream_gene_variant
T/C 893768 downstream_gene_variant
T/C 893774 downstream_gene_variant
A/G 893836 downstream_gene_variant
A/G 894026 synonymous_variant p.Ser79Ser
C/G 894130 missense_variant p.Val45Leu
A/T 894195 missense_variant p.Ile23Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11431.1
MEVIAEIVLRNLKSFAQEEFGMIWNLKDDVQEMKRTVSAIKAVLVDAEGKANNLQISNWLEELKDVLYDADDLLNDISSEAMKRKVIGARKILRKIQPLYGSQNFCPPPSLQFPFLLSIKFLASLPPDVTSLHNLQTLKVSGCGKLKELPSDINKSLRHLELNNCGELRCMPCGLGRLTNLQTLTHFLLDSKSKNVDISELSGLNNLRGKLVIKWLDSLRENVAVVESANILLEKQHLQDLELRWGLGKTKYWRDTIEKRRKEEENTWVEIETILYIEETGFENQMKDEKILQGLQPHHSIKRLVIDGYCGNSLPDWIGNLSSLLSLEISNCYGLKSIPDGIRNLVSLQRLCIYNCSRLEGGCAKGHGGEWSKIAHIPEVLVSAFYPTDLRYIN*


CDS Sequence:
>Vu_11431.1
ATGGAAGTAATTGCTGAAATAGTCTTACGAAACTTGAAGTCTTTTGCTCAAGAGGAGTTTGGAATGATTTGGAATCTCAAAGATGACGTACAGGAAATGAAGCGCACAGTATCTGCAATAAAGGCTGTACTCGTGGATGCAGAGGGAAAGGCCAACAACCTTCAAATCAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGACCTTCTCAATGATATCTCCTCTGAAGCGATGAAAAGAAAAGTGATTGGTGCTAGAAAAATCTTGAGAAAGATACAGCCACTTTATGGAAGTCAAAATTTTTGTCCTCCGCCAAGTCTTCAATTTCCTTTTCTCTTAAGCATAAAGTTTCTAGCAAGTCTTCCACCAGATGTTACTAGCCTACATAACTTGCAGACTTTAAAAGTTTCTGGATGTGGCAAACTTAAAGAATTACCCTCAGATATCAACAAAAGTCTTAGGCATCTTGAATTGAATAATTGTGGGGAATTGAGATGTATGCCATGTGGGTTGGGACGATTGACCAATCTTCAAACACTGACACATTTTTTGTTGGACTCTAAAAGTAAAAACGTTGATATAAGTGAATTGAGTGGGCTAAACAACCTTAGAGGGAAATTAGTAATTAAATGGTTGGATTCCCTGCGAGAAAATGTTGCAGTGGTTGAGTCTGCAAACATATTACTGGAGAAGCAACATCTTCAAGATTTGGAATTACGGTGGGGGCTCGGTAAGACTAAATATTGGAGGGATACTATTGAAAAAAGACGTAAGGAAGAAGAAAACACATGGGTTGAAATTGAAACGATCCTGTATATAGAGGAGACAGGTTTTGAAAATCAAATGAAAGATGAAAAGATATTGCAAGGCCTGCAGCCACATCATTCAATAAAAAGACTAGTAATAGATGGATATTGTGGCAACAGTTTACCAGACTGGATAGGGAATCTCTCATCACTCTTGAGTCTTGAAATCAGTAATTGCTATGGTTTGAAATCAATACCTGATGGAATTCGGAACCTTGTATCTTTACAACGACTCTGCATATATAATTGCTCAAGGCTAGAAGGAGGATGTGCTAAAGGACATGGTGGAGAATGGTCAAAAATCGCTCATATCCCAGAAGTTCTTGTCTCTGCCTTTTATCCAACCGATCTCAGGTATATTAATTGA


Promoter Sequence:
>Vu_11431::LG3:894262-896262(-)
ACAAGAGATGAAAGATACATTATTTTAAAATCTACAAGGAATTAACACCTCTTTTGTTTCACATAAAGAATGAATAATTTCATTTAACAAAACAACTGTAACACTCAATCACTCAAGATCATATCACTTTATCCACACTAAGTTTTCAAAACTTTCAACATAGAGTTATAACCTAACTCCTGTAATTTTGAAAAAGAACTCGTCACTTCATTTCTTAAGCCAAAATTTGAAATTAGGTTAAGAATATAAAATGTCAAGTTGCAATTGTCGAAAGCTATTTTTCAAAATATATTTTTTTTGTAATAATCAATTATCATGAGTAATAATCGTATATATTTAAAAATCTTGTTTTCCTTCAAGTGTTACCATGTCATTACTTTGTGAATCTATAGACTTAGCCTAAAATACTTTAAGAACTATTACAAGAGTATTATAAAGACATTACAAAAGCAAAACATTACAACAAACAAGATATAAATCTTCCAAATAATCTTTGACTTCTATTTCATCTTTAGATTTGGTATCACCATCAAAATAAACTTCCTGAAAAATAATGTCCAACATCTTTTTTTTTTCTCAACAATCTTTCTCTTTTTTATGATGGTCAAAATTTTGCTTAAATCCTTTGTAATGAACTTACAAACACACATACTACAAAAGAGGAAAACATTAAAAAATTTCTTAAGCATTTAAGCTTTTAAATTTTTCTCTCCTTTTCTTTTATCATAATAAAAATAGAATAATTAAGAATAAAAAACTCCCCTACATGTAATATTTTTTTTTATTAAAACAAACATTTATAGAACATGTACTCTCCTAGATCTAAGAGTGATTCTAAAGATTAAAGGAAAAAAATTATTTAAGAGAAGGTAACATCATTTTAAAAAATGATCTTTAACTTTATAATTTCCATTTACGAAGCATCTAGTTATTTACTTGTTTAAATTTTTGAAACTTTCTCAAACCGTTAAAAAATTTAAAATGACCTTTAACTTGAATATGTATTTTTTTTTTTTTGCAATAGATAGCAACTATAATAAGGTATGATATTTAAAATGTTAAACTAATTTTGTGTATTTAAATATCAATTATAGTTTATCTTATCTTTAGTTTTTAAAACATTACATTGTTTCAAAGTTCACAAAATATTTATATAGTTCAATGTTGAAAAAAAAACCAATATATAATAAAACAGTATGATAGTATCTATATTTAACTTTTATTTAATTACATACTTTTTATTAAAATATTTATTCCTTTAAGCATATGCACAGATTAGGTGTTAGTTTAAAACATGGTAGTTAAAAGGTAACACAATGAATTTAAAGTATGTATAAAAATTTGTTACGTGTGAAAATAATATTATATTATATTTATTTCCTTTATATAGGTGGCTCCTCTAATATCTTCAACACTTGCCCACAACTGTTGCCTCTGCATTTACACTCATTTTTTCCAAAGCAGGTCAGCTCTCTTTCCATGTCTCTCTAATTCTAACTTTCTTAGGTATTGAACCACTAAGATGTTCTTTGTAGATAGCACCAATTAATTTCATTATAAAGCATGCAACTAATTATCATCATAACTGGAATTTTGTCTGCTCCTTTCATGTTATATGCAACAAGACTATTTGACTTCTAAGGTCAACGATTTGTCCTCAAATCTGATTTATAACATATCAACACAAATCATAGATAACTGAGTTCTTTAAGCAAAGTAAAGGGTTTGATCCCCTGATTGTGTTTATGGAGAAGATTTTTTCAGGAGAGGTAACACCCACTACTATGAGGATATTGCTCACAATGAAAATGATATGATTTATAAAAGAACGTTATGGTGGCTGTCACCCATGTAGCTTGCCACACTTTATTTTTTAAAGGATTCATTTGTTGTTATGGTTGTGAAATTATTTGATATCTAATGCCTGTACAAAACTACATTTGGCTGTGAAATTGTTTGATCCCTTACTAATATTTGTACCAAACTTCATCTGGCAAAGG


Gene Sequence:
>Vu_11431(-)
ATGGAAGTAATTGCTGAAATAGTCTTACGAAACTTGAAGTCTTTTGCTCAAGAGGAGTTTGGAATGATTTGGAATCTCAAAGATGACGTACAGGAAATGAAGCGCACAGTATCTGCAATAAAGGCTGTACTCGTGGATGCAGAGGGAAAGGCCAACAACCTTCAAATCAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGACCTTCTCAATGATATCTCCTCTGAAGCGATGAAAAGAAAAGTGATTGGTGCTAGAAAAATCTTGAGAAAGATACAGGTTTTCTTCTCCCAAGAAAACCAAATTGTCTATAGTTTTAAATTAGGTCATCAAATGAAAGAAATTCAGAAGAGGCTAGATGCTATTGCTAAAAACAAGATTACTTTGCAATTGACTGACCGCCCTATGGAGACTTCAATTGCATATAGGAGGCAGAGACAAACTTACTCTTTTGTGAGAGAAGATGATGTCATTGGAAGAAAAGAGGAAAAGAAACTTCTTGAAAGTTATTTGCTAGACACCAAAGTGAGTGTGATAGACAATGTGTCTGTATTAGCCATAGTTGGGTTTGGAGGACTAGGTAAGACTACACTCGCTCAACTTGTTTTTAATGACAATGCTGTCCAATGCTCTTTTGAGCAGAAAATGTGGGTGTGTGTCTCAGATGAATTTGACATGAGGAAAATAGCCGAAAAGATGATTGGGAATGATAACAATAGTGAGATTGAGCAACTGCAGCAAGATCTCAGAAACAAAGTTCGTGGAAAAAAGTTTCTACTTGCTCTGGATGACGTGTGGAATGAGGATAGGGAACTGTGGCTTAAATTCAAGAGCTTAGTAATGGAAGGAGGTAAAGGAAGTGCCATAATTGTAACAACACGTAGTAGGACCGTGGCGAAAATAGTGGCCACACATCCACCCCTTTTCTTGAAAGGTCTTGATTTAGAAAGATCTTGGAAGCTATTCTCTCGAGTGGCTTTTGATGGGGGGAAAGAACCAAATGATTTGGAATTGTTAGCCATGGGAAGGGATATTGTTAAAAAATGTGCTGGGGTTCCCCTGACCATAAGAACTATTGGCAGCCTCTTGTACTCTCGAAACATTGGTCGGAGTGATTGGCTATATTTTAGTGAAGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATTTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCTTCATTTTTGAAAAAGTGTTTTGCTTATTGTTCATTGTTTCCAAAAGATTTTGTGTTTGACAAGAAAACCCTCGTTCAGTTATGGGTGGCTGAGGGGTTCATTCAACCATCACGAGACAATAGATGTGAAGAAGACGTTGGTCATGAGTACTTCATGAATTTGCTGTCAATGTCACTTTTCCAAGATGTGAATTTAGATGATTGTGGTAATATTCTTACTTGTAAAATGCATGACCTGATACATGATCTAGCACAGCTAGTGGTTGGAAAAGAATACGCCTTTGTTGAAGGAAAAAAAGAGCACATTGAAAACAGAACACGTTATTTGTCCTCTTGTACTTCATTACATTTTTCAGAGAAAACATCATCATCTTCCAACAAGCTAAGGACATTTATTTTGCTTGGACAGCCACTTTATGGAAGTCAAAATTTTTGTCCTCCGCCAAGTCTTCAATTTCCTTTTCTCTTAAGCATAAAGTGCCTACGGGTTTTAACACTCTGTGGGTTGCATTTGATAACAATTCCAAATAATATTCGAGATTTGAAGCAATTGAGATATCTTGATCTTTCAATGAATAGGTTTCTAGCAAGTCTTCCACCAGATGTTACTAGCCTACATAACTTGCAGACTTTAAAAGTTTCTGGATGTGGCAAACTTAAAGAATTACCCTCAGATATCAACAAAAGTCTTAGGCATCTTGAATTGAATAATTGTGGGGAATTGAGATGTATGCCATGTGGGTTGGGACGATTGACCAATCTTCAAACACTGACACATTTTTTGTTGGACTCTAAAAGTAAAAACGTTGATATAAGTGAATTGAGTGGGCTAAACAACCTTAGAGGGAAATTAGTAATTAAATGGTTGGATTCCCTGCGAGAAAATGTTGCAGTGGTTGAGTCTGCAAACATATTACTGGAGAAGCAACATCTTCAAGATTTGGAATTACGGTGGGGGCTCGGTAAGACTAAATATTGGAGGGATACTATTGAAAAAAGACGTAAGGAAGAAGAAAACACATGGGTTGAAATTGAAACGATCCTGTATATAGAGGAGACAGGTTTTGAAAATCAAATGAAAGATGAAAAGATATTGCAAGGCCTGCAGCCACATCATTCAATAAAAAGACTAGTAATAGATGGATATTGTGGCAACAGTTTACCAGACTGGATAGGGAATCTCTCATCACTCTTGAGTCTTGAAATCAGTAATTGCTATGGTTTGAAATCAATACCTGATGGAATTCGGAACCTTGTATCTTTACAACGACTCTGCATATATAATTGCTCAAGGCTAGAAGGAGGATGTGCTAAAGGACATGGTGGAGAATGGTCAAAAATCGCTCATATCCCAGAAGTTCTTGTCTCTGCCTTTTATCCAACCGATCTCAGGTATATTAATTGA