Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11384 LG3 389185 392833 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 390163 stop_lost p.Ter504Glnext*?
T/C 390208 missense_variant p.Arg489Gly
T/G 390210 stop_lost p.Ter488Serext*?
T/A 390214 missense_variant p.Ser487Cys
G/A 390259 stop_gained p.Gln472*
G/A 390285 downstream_gene_variant
T/C 390289 downstream_gene_variant
T/G 390329 downstream_gene_variant
G/A 390331 downstream_gene_variant
A/G 390424 downstream_gene_variant
G/A 390502 downstream_gene_variant
T/C 390505 downstream_gene_variant
G/T 390572 downstream_gene_variant
G/T 390585 downstream_gene_variant
T/G 390967 downstream_gene_variant
G/A 391028 missense_variant p.Thr457Met
C/A 391046 missense_variant p.Cys451Phe
A/T 391057 synonymous_variant p.Thr447Thr
G/C 391100 missense_variant p.Thr433Ser
C/T 391127 missense_variant p.Arg424Lys
C/G 391205 downstream_gene_variant
A/G 391331 downstream_gene_variant
G/C 391460 downstream_gene_variant
C/A 391577 downstream_gene_variant
G/T 391608 downstream_gene_variant
A/T 391667 synonymous_variant p.Thr389Thr
C/T 391693 missense_variant p.Asp381Asn
A/C 391730 missense_variant p.Ile368Met
T/A 391807 missense_variant p.Arg343Trp
T/C 391810 missense_variant p.Asn342Asp
A/T 391904 synonymous_variant p.Gly310Gly
C/T 391931 synonymous_variant p.Lys301Lys
C/G 392183 missense_variant p.Lys217Asn
T/C 392581 missense_variant p.Arg85Gly
C/G 392650 missense_variant p.Ala62Pro
T/G 392793 missense_variant p.Lys14Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11384.1
MPTSSTITPNQSLKYHETLVSSAGTFEAGFFDFGNSRRQYFGIWYKGISPRIIVWVANRNVAAQNSTAVLKLTHQGHLVILDGSRGRVWSSNSSKIAVKPVMQLLDSGNLVVRDGESSENFLWESFDYPGDTFLAGMKLKSDFVTGPYQYLTSWRDDDDPAEGDFSYKIDTKGFPQQVTTNGTTIFYSTGPWNGYLFSGVSWDRMHRFLNFSLEFTKKGVSYGYETLNSSVLTRTMLKLDPRGGTERSLWSNQKQSWDNVNSHPLGQCEYFAACGVNSICNVNNDPICECLQGFTPKFQDKWDSHDWSGGCVRRTKLSCDDGDWFKEYTGIKLPETSSSWFNRSLSLKECETLCLRNCSCTAYANSDIRDGGSGCLLWFYDIADMRTHTDRGQEIHIRLPFSEQDQRRNKRDLNPKRNKKDLNSERNNLNPKRLAGTVVGLVTFIVGLTILVWATSKRMKGMKQPKPDTMRGKLLDWAKRLKIIEGIARGLMYLHQDSRLRIIHRDIKTSNILLDDNMTPKISDFGLARIFGIDQAEANTSRVMGTHGYMPPEYAVHGSFSTKSDVFSFGVIVIEMISGRKNRGFHDPHHHLLNLLGHAWRLWNEERPLELMDEILDDGGDLCLEILRCIHVGLLCVQQNPENRPNMSSVVLMLNGEKLLPKPSEPGFYIGKDNIADTESSKQYEKCSVNEVSISSLEVR*


CDS Sequence:
>Vu_11384.1
ATGCCCACTTCCTCTACTATCACTCCAAATCAGTCCTTAAAATATCATGAGACACTTGTTTCTTCTGCAGGAACCTTTGAAGCTGGATTTTTTGACTTTGGAAACTCAAGAAGACAATATTTTGGTATATGGTACAAGGGCATATCACCTAGGATTATTGTGTGGGTTGCCAACAGGAATGTCGCAGCACAAAACTCAACAGCAGTTCTTAAACTTACTCATCAAGGACATCTTGTCATTCTTGATGGCTCCAGAGGAAGAGTGTGGTCCTCCAACTCATCAAAAATTGCAGTGAAACCAGTTATGCAACTTTTAGATTCAGGAAACCTTGTTGTCAGAGATGGAGAGAGCTCAGAGAACTTCTTGTGGGAAAGCTTTGATTATCCTGGAGACACTTTCCTTGCAGGCATGAAACTGAAAAGTGATTTTGTTACTGGTCCATATCAGTATCTCACGTCTTGGAGGGACGATGATGATCCAGCTGAAGGTGACTTTTCTTATAAGATCGATACAAAGGGCTTTCCTCAACAAGTTACTACAAATGGAACTACAATTTTTTACAGCACAGGGCCTTGGAATGGCTATCTTTTCAGTGGTGTTTCTTGGGACAGAATGCACAGATTCTTGAATTTCTCTCTTGAGTTCACTAAGAAAGGGGTTTCTTATGGATATGAAACGTTAAACAGTTCAGTGCTTACTAGAACAATGCTTAAGCTCGATCCAAGAGGGGGTACAGAGCGTTCTCTATGGTCAAACCAAAAACAAAGTTGGGATAATGTAAACAGTCATCCACTAGGTCAGTGTGAATATTTTGCAGCCTGTGGCGTCAACTCTATCTGCAATGTTAATAATGATCCAATATGTGAATGCTTGCAAGGTTTCACACCAAAGTTTCAAGATAAGTGGGATTCTCATGATTGGTCTGGTGGTTGTGTCAGAAGAACAAAGTTAAGTTGTGATGATGGAGATTGGTTTAAGGAGTACACAGGAATAAAGCTTCCAGAAACGTCTTCTTCCTGGTTTAACAGGAGCTTGAGCCTTAAGGAATGTGAGACATTGTGTTTGAGAAATTGCTCTTGTACTGCATATGCAAATTCAGATATTAGAGATGGTGGGAGTGGTTGTTTGCTTTGGTTCTATGACATTGCGGACATGAGAACTCACACTGATCGAGGGCAAGAAATTCATATACGACTGCCATTTTCTGAACAAGATCAAAGAAGGAATAAGAGGGACCTAAATCCAAAGAGGAATAAGAAGGACCTAAATTCAGAGAGGAATAACCTAAATCCAAAGAGACTTGCAGGGACTGTTGTAGGACTTGTTACATTCATAGTTGGACTAACAATTCTTGTGTGGGCGACTTCAAAACGTATGAAAGGGATGAAGCAACCCAAGCCAGATACAATGCGAGGCAAATTACTAGATTGGGCTAAGCGGTTGAAAATTATCGAGGGAATAGCTAGAGGTCTTATGTATCTTCATCAAGATTCCAGACTTAGAATAATACATAGAGACATCAAAACAAGTAACATTCTTCTTGATGACAATATGACTCCAAAAATATCAGATTTTGGATTAGCAAGAATATTTGGAATAGATCAAGCTGAAGCAAATACAAGCAGAGTGATGGGAACGCATGGCTATATGCCTCCAGAATATGCAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAATTGTTATTGAGATGATTAGTGGAAGGAAGAATCGTGGATTTCATGACCCTCACCATCATCTTCTCAACCTTCTTGGCCATGCGTGGAGATTATGGAATGAAGAAAGGCCACTGGAGTTAATGGATGAGATATTAGATGATGGTGGAGACTTATGTTTAGAAATACTGCGGTGCATTCATGTGGGTCTGTTGTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTTGTTTTGATGTTAAATGGTGAGAAGTTGCTACCAAAACCAAGCGAACCTGGCTTCTATATAGGAAAAGATAATATTGCTGACACTGAATCTTCAAAGCAATATGAAAAGTGTTCAGTAAATGAAGTTTCAATTTCATCCTTAGAGGTGCGATAG


Promoter Sequence:
>Vu_11384::LG3:392833-394833(-)
ATGTTTAATTTTATTGTGGCCCGAATGCTGCTCCTTCTGCTGACTTTTCATTCGTCATAGTTTTGAATACTACTAGCAAGACAAATTCGTGATGCTTTCTTTGTTTTCTTTGGTTTGTCTTACTAATAAGAAATTCACCTTTAAATTCAGCTCTTTGAAATACTCATCAAAACCATAGCATTATGTACTCTTGGTGGTCGTAAGACAGCGCTATAGTCGTGACTTTTCATTAGTCAAAGTTTTGGACATTACAAATAAGAATTCGGCATAAGGTGATCAAATTGTTGAGAAATTGAGAAAAGTATATGGAAGTGAAATTTTTTTCTCTTTCTATATCTTAAAGTAGTCTTAAGAAATAAAAAATTAGGAGAAGAGAATAACTTGTTATATTTTTTAAGTAGAAAACCTACTTAAATATGATAAGGAAAAATAACGGGACTAGGCAAGTATAAGAATTTTACTATAAAAGTTGGATTATAAAATGATCTCTCTTTTTTTTTCTCATAAATGACACTTAACTCGTTACTACTCTTCAACTTACTAGCCGAATTACTTAACTACTCTTATGTATCTCCAACACTCTCAAAATTCTAAGTGACAGTGAATATTAAATGTTCTTCACATTTCCAAAGATGAATGTACTTCTTTTCAACAGCCAAAGAAATAATTCTAAGACTTAGAACATCTTCTTTCCTTGATTTTACCTCTTTTACGGGATTTGTTAACTTCTTGACAAGCGTATCAAATCGTTTAAGTAATATATATTGTAAATCCATGCATAAGAATTGCATTCCTCAATTAAGGAGGGATGTATTTCCAACACAAAAGATATATATTCTCAAATCCAATTCTTAAATATTCAAATTTATATTACTTTGACTTCATTTTAAGTTGACAAAAGTCAACCAAAGTAGAATAGAAGATATGAGTCGAACTAAGCCCAAGTCGAGTTGAGTCAGATTGGGATCAAGTTGAAATAGGTATGCTCAAGTTGAGTCAGATTGGGTCTAGGATGAACAAGGTCTTCTCAAGCTGAGTCGACTCGACTGAAAACTAAAGTCAAGTTAAGACGAATCAGATTGAAGGTTGAGTCGAGATGACTTTAACCAAAAGTCAAGATGATTAGATATAGGCCTAATGAATCAAGTTGATTTAGTCTCAGGTTGACTTAAGTTAGCTCTGGTCAAGGTTACGGTAAAATGACCAAAACCACATAAGTAGTTGAGCCAAATCCAATTCGAGTTGAGTCAGTCCAAGCCCATCTCTTAAGTTAGCTCTGGTCAAGGTTATGGTAAAATGACCAAAACCACATAAGTAGTTGAGCCAAATCCAATTCGAGTTGAGTCAGTCCAAGCCAATCTCTGTTAGAACTAATAGTTAGTTCTATTAGGTTGATCTCACGGAATTGAATCTAATTGACAAAGTGGATACAATCTAGATTTAATCCAATTAAAGAGAAAAAAAAAATCCAAATCTAATCGATTTAGTTAAAATATATTTGGACTATAGATCCAATATTGGAACTAGATTAAAAATCCAATCCATGATCACCCTTTACCGGTAAAAAGAGTTAAAAATTTGTGAGTGAACGGGACAAAGACAAAATGCACTTAAACGAACTAGACTAGAGGTTTTGTCCACTGCAAGGAACACAATCCGATAGTTATGTCAAAGAAATTGGCTGGCGAAAGTTTGAAGAAGATACTGAGGTGGGAAGTTGCAGGGAAAATGGGAAAGTCAACTGTTCGTAGTTAATTTACATAGATATGAAATAGAAGTAATACACTTTTACGTGAGTTCCAAAACATCTATTTCTATGATCAATACTTTAGTGAGTTAACGCGTGGGCAAAATGGCAGAGTTGACTAACCAGTTTGAGTGTAATATAGAGTATTTGATTAAGAGGATGATGGTAGCAGTAACCATAACAAACATACACACACACAATGGAGAGCCTACAAATTCTCACGCTAATCATTTACATTACTTTCTTTTGTTTC


Gene Sequence:
>Vu_11384(-)
ATGCCCACTTCCTCTACTATCACTCCAAATCAGTCCTTAAAATATCATGAGACACTTGTTTCTTCTGCAGGAACCTTTGAAGCTGGATTTTTTGACTTTGGAAACTCAAGAAGACAATATTTTGGTATATGGTACAAGGGCATATCACCTAGGATTATTGTGTGGGTTGCCAACAGGAATGTCGCAGCACAAAACTCAACAGCAGTTCTTAAACTTACTCATCAAGGACATCTTGTCATTCTTGATGGCTCCAGAGGAAGAGTGTGGTCCTCCAACTCATCAAAAATTGCAGTGAAACCAGTTATGCAACTTTTAGATTCAGGAAACCTTGTTGTCAGAGATGGAGAGAGCTCAGAGAACTTCTTGTGGGAAAGCTTTGATTATCCTGGAGACACTTTCCTTGCAGGCATGAAACTGAAAAGTGATTTTGTTACTGGTCCATATCAGTATCTCACGTCTTGGAGGGACGATGATGATCCAGCTGAAGGTGACTTTTCTTATAAGATCGATACAAAGGGCTTTCCTCAACAAGTTACTACAAATGGAACTACAATTTTTTACAGCACAGGGCCTTGGAATGGCTATCTTTTCAGTGGTGTTTCTTGGGACAGAATGCACAGATTCTTGAATTTCTCTCTTGAGTTCACTAAGAAAGGGGTTTCTTATGGATATGAAACGTTAAACAGTTCAGTGCTTACTAGAACAATGCTTAAGCTCGATCCAAGAGGGGGTACAGAGCGTTCTCTATGGTCAAACCAAAAACAAAGTTGGGATAATGTAAACAGTCATCCACTAGGTCAGTGTGAATATTTTGCAGCCTGTGGCGTCAACTCTATCTGCAATGTTAATAATGATCCAATATGTGAATGCTTGCAAGGTTTCACACCAAAGTTTCAAGATAAGTGGGATTCTCATGATTGGTCTGGTGGTTGTGTCAGAAGAACAAAGTTAAGTTGTGATGATGGAGATTGGTTTAAGGAGTACACAGGAATAAAGCTTCCAGAAACGTCTTCTTCCTGGTTTAACAGGAGCTTGAGCCTTAAGGAATGTGAGACATTGTGTTTGAGAAATTGCTCTTGTACTGCATATGCAAATTCAGATATTAGAGATGGTGGGAGTGGTTGTTTGCTTTGGTTCTATGACATTGCGGACATGAGAACTCACACTGATCGAGGGCAAGAAATTCATATACGACTGCCATTTTCTGAACAAGGTAATTTCATTTCCATTCATTTTATGCCTCTTTGTCAGATTTAGTTCAAAAATATAATTTATGTTAAGTTGGAATCGATAGAAAAGAAAAGAATGAAATGGAACATTACTAGGATTCATCAAAGAATGCATTCTATTCCATTGCATTTAAAACCTTTCCTCCATTGCATTTAAAACCTTTCCTCCATTGCATTCCATCAAAATTGTAAATTCTATTAGACAACTAAGAGGATGAAATTATAGCAATACTAGATTCTGCTTACCATCAACAAGCACAGTATGGCTAATAGTAATGTGTCAGAAGTTGGAACTAGCGGGTATAAATCAGCTTCCAAGTTGAAGTTGTTCTGTATAACATGCCTTTCTCCTCTTTTGTTTTTCCCTGAAATGTAAGCTTAGAGCTACTTGTGGATTGAGACTAATTTCATTCCTCAGATCAAAGAAGGAATAAGAGGGACCTAAATCCAAAGAGGAATAAGAAGGACCTAAATTCAGAGAGGAATAACCTAAATCCAAAGAGACTTGCAGGGACTGTTGTAGGACTTGTTACATTCATAGTTGGACTAACAATTCTTGTGTGGGCGACTTCAAAACGTATGAAAGGGATGAAGCAACCCAAGCCAGGTGAAGAATTTATAATTTATGAAGTATTTTACATTTCAATGAAAAGAAGAATAATATTGAAATCAAAGATTATTTTTCAGTTCTCAAGTTTGTTTTCTTGTTCACCTAATGTCTATTTATCTTGTTTACATTATAAGCACAAATATTATATTATTTATAAGCAATTCATGTCTCCTGCTACATTGGGATTACTGAAAAAAGCTATTCCCTGGAAGCACATGATGGAGAAGGAAAACAACAGCTTACCGACAATGTTTGATTTTTCAACCATTGATATTGCCACAAATCATTTTTCAAGCACAAACAAGTTAGGAGAAGGTGGTTTTGGAACAGTACACCAGGTAGGTGGTCAAATTTTTTCTTGGTTACCAAGTTATTCGTCCTGATTGTGAAGTACCAAAATTCTCAAAATCATTACTAGGGAACGTTGATAGATGGACAAGAGATTGCAGTCAAGAGACTTTCAAAAACTTCGAGACAGGGAACTGAGGAATTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGGTTTCTTCTTTCACTCCCATCAAATTTTTTGCTTCGATTTTTCTCTTGCCTTCGTGTTATTTCCATGCTAACTTACAAAACGAATGTTGCCAGATACAATGCGAGGCAAATTACTAGATTGGGCTAAGCGGTTGAAAATTATCGAGGGAATAGCTAGAGGTCTTATGTATCTTCATCAAGATTCCAGACTTAGAATAATACATAGAGACATCAAAACAAGTAACATTCTTCTTGATGACAATATGACTCCAAAAATATCAGATTTTGGATTAGCAAGAATATTTGGAATAGATCAAGCTGAAGCAAATACAAGCAGAGTGATGGGAACGCAGTAAGAAACTTAATTTTTGTTTAACAAAGCTATACACAACCACTTCTCCTTACTTTGATACTGTTTTGCAGTGGCTATATGCCTCCAGAATATGCAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAATTGTTATTGAGATGATTAGTGGAAGGAAGAATCGTGGATTTCATGACCCTCACCATCATCTTCTCAACCTTCTTGGCCATGTAAGCTTGAAGTGGTTTCTTGATAACTTGGTTTCCTTATATCATTTGTTTGTCTAAGTCAAACCTGAAGAATTATGAAACTTAAAATGAAAACTAATTCGTGCATATACTCAATGTAATTGAACTATAGTTGAAAGTAAACTCCACACCAACACTCGTACCCTCCCAAATAATCATCTAAAAGGTTTTGAACACATCATAGGAACATGAAAGTTTGCTTTTAGTTTTATCATCCATTGAAACTCCTGTATGTTTGAATAGAAATTTTGAGTAGGGAATGAACTCTCACTCTTGATATTCCTATTTGTCATATCAGGCGTGGAGATTATGGAATGAAGAAAGGCCACTGGAGTTAATGGATGAGATATTAGATGATGGTGGAGACTTATGTTTAGAAATACTGCGGTGCATTCATGTGGGTCTGTTGTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTTGTTTTGATGTTAAATGGTGAGAAGTTGCTACCAAAACCAAGCGAACCTGGCTTCTATATAGGAAAAGATAATATTGCTGACACTGAATCTTCAAAGCAATATGAAAAGTGTTCAGTAAATGAAGTTTCAATTTCATCCTTAGAGGTGCGATAG