Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11381 LG3 348236 351574 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 348245 synonymous_variant p.Asp567Asp
T/A 348248 missense_variant p.Leu566Phe
G/A 348251 synonymous_variant p.Ser565Ser
G/T,* 348393 missense_variant p.Ser518Tyr
G/A 348401 synonymous_variant p.Asn515Asn
T/C 348411 missense_variant p.Asn512Ser
G/C 348578 intron_variant
T/A 348594 intron_variant
A/C 348612 intron_variant
C/T 348613 intron_variant
A/G 348614 intron_variant
A/T 348639 intron_variant
C/T 348658 intron_variant
T/C 348667 intron_variant
C/T 348831 intron_variant
T/G 348835 intron_variant
T/G 348836 intron_variant
C/G 348864 missense_variant p.Gly467Ala
A/T 348910 missense_variant p.Phe452Ile
A/G 348924 missense_variant p.Leu447Ser
A/T 348951 missense_variant p.Val438Asp
A/T 348965 missense_variant p.Asn433Lys
G/A 349076 intron_variant
C/A 349239 intron_variant
A/G 349339 intron_variant
T/C 349440 intron_variant
C/T 349627 intron_variant
A/T 349655 intron_variant
G/C 349668 intron_variant
C/T 349945 intron_variant
A/G 349973 intron_variant
T/A 349987 intron_variant
T/C 350108 intron_variant
G/C 350111 intron_variant
G/T 350119 intron_variant
C/T 350130 intron_variant
G/T 350168 intron_variant
G/A 350196 intron_variant
T/A 350248 intron_variant
A/C 350276 intron_variant
G/A 350348 intron_variant
T/A 350353 intron_variant
A/T 350414 synonymous_variant p.Thr387Thr
G/T 350415 missense_variant p.Thr387Asn
C/G 350427 missense_variant p.Gly383Ala
A/C 350471 missense_variant p.Ile368Met
A/T 350573 synonymous_variant p.Pro334Pro
A/C 350576 synonymous_variant p.Leu333Leu
A/G 350589 missense_variant p.Ile329Thr
T/A 350614 missense_variant p.Asn321Tyr
T/A 350665 missense_variant p.Thr304Ser
A/T 350696 synonymous_variant p.Gly293Gly
G/A 350866 missense_variant p.Leu237Phe
C/A 350919 missense_variant p.Gly219Val
C/A 351043 missense_variant p.Val178Phe
A/G 351053 synonymous_variant p.Phe174Phe
A/T 351054 missense_variant p.Phe174Tyr
T/A 351075 missense_variant p.Tyr167Phe
G/C 351093 missense_variant p.Ala161Gly
G/C 351097 missense_variant p.Pro160Ala
C/T 351103 missense_variant p.Asp158Asn
A/T 351104 missense_variant p.Ser157Arg
C/T 351105 missense_variant p.Ser157Asn
G/A 351120 missense_variant p.Thr152Met
C/T 351129 missense_variant p.Arg149Gln
A/G 351137 synonymous_variant p.Gly146Gly
C/G 351138 missense_variant p.Gly146Ala
C/G 351158 synonymous_variant p.Leu139Leu
G/T 351176 missense_variant p.Phe133Leu
C/G 351205 missense_variant p.Glu124Gln
C/T 351266 synonymous_variant p.Gln103Gln
T/C 351346 missense_variant p.Asn77Asp
C/G 351373 missense_variant p.Ala68Pro
G/A 351385 stop_gained p.Gln64*
T/A 351386 synonymous_variant p.Ala63Ala
G/A 351501 missense_variant p.Thr25Ile
C/G 351517 missense_variant p.Val20Leu
A/G 351527 synonymous_variant p.Pro16Pro
G/T 351538 missense_variant p.Leu13Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11381.1
MPTSSTITPNQSLQYPETLVSSAGTFEAGFFDFGNSRGQYFGIWYKNISPRIIVWVANRNVPAQNTTAVLKLTHEGNLVILDGSGGRVWSSNSSKIAVKPVMQLLDSGNLVVKDGESSENFLWESFDYPGDTFLAGMKLKSDFVTGPYRYLTSWRDSDDPAEGEFSYMIDTKGFPQQVTTDGTTILYSTGPWNGYLFSGVSWDRMSRFLNFSFEFTNKGVSYGYEMLNSSVLSRTMLKLNPRGATERFLWSNQRQSWDIVNSHPTDQCEYFATCGVNSICNVNNVPICECLQGFTPKFQAKWDTHDWSGGCVRRTNLSCDNGDWFKEYIGIKLPETSSSWFDRSLSLQECETLCLRNCSCTAYANSDIRDGGSGCLLWFHDIGDMRTHPDRGQEIHIRLPFSERDQAEENTNRVMGTHGYMPPEYVVHGSFSTKSDVFSFGVIVIEIISGRKIRGFHDPHHHLLNLLGHAWRLWNEERPLELMDEILDDGGDLCLEILRCIHVGLLCVQQNPENRPNMSSVVLMLNGEKLLPKPSQPGFYIGKDNIADTESSKQYERCSIYEVSISSLDGR*


CDS Sequence:
>Vu_11381.1
ATGCCCACTTCCTCTACTATCACCCCAAATCAGTCCCTACAATATCCTGAGACACTTGTTTCTTCTGCAGGAACCTTTGAAGCCGGATTTTTTGATTTTGGAAACTCAAGAGGACAATATTTTGGTATATGGTACAAGAACATATCACCTAGGATTATTGTGTGGGTTGCCAACAGGAATGTCCCAGCACAAAACACAACAGCAGTTCTGAAACTTACTCATGAAGGAAATCTTGTCATTCTTGATGGCTCCGGAGGAAGAGTGTGGTCCTCCAACTCTTCAAAAATTGCAGTGAAACCAGTTATGCAGCTTTTAGATTCAGGAAACCTTGTTGTCAAAGATGGAGAGAGCTCAGAGAACTTCTTGTGGGAAAGCTTTGATTATCCTGGAGACACTTTCCTTGCAGGAATGAAACTGAAAAGTGATTTTGTTACTGGTCCATATCGGTATCTCACGTCTTGGAGGGACAGTGATGATCCAGCTGAAGGTGAGTTTTCTTATATGATCGATACAAAGGGCTTTCCTCAGCAAGTTACTACAGACGGAACTACAATTTTGTACAGCACAGGGCCTTGGAATGGCTATCTTTTCAGTGGTGTTTCTTGGGACAGAATGAGCAGATTCTTGAATTTCTCTTTTGAGTTCACTAACAAAGGGGTTTCTTATGGATATGAAATGTTAAACAGTTCAGTGCTTAGTAGAACAATGCTCAAGCTCAATCCAAGAGGGGCTACAGAGCGTTTTCTATGGTCAAACCAAAGACAAAGTTGGGATATTGTAAACAGTCATCCAACAGATCAGTGTGAATATTTTGCCACTTGTGGTGTCAACTCTATCTGCAATGTTAATAATGTTCCAATATGTGAATGCTTGCAAGGTTTCACACCAAAGTTTCAAGCAAAGTGGGATACTCATGATTGGTCTGGTGGTTGTGTCAGAAGAACAAATTTAAGTTGTGATAATGGAGATTGGTTTAAGGAGTACATAGGAATAAAGCTTCCTGAAACGTCTTCTTCCTGGTTTGACAGGAGCTTGAGCCTTCAGGAATGTGAGACATTGTGTTTGAGAAATTGCTCTTGTACTGCATATGCAAATTCAGATATTAGAGATGGTGGGAGTGGTTGTTTGCTTTGGTTCCATGACATTGGGGACATGAGAACTCACCCTGATCGAGGGCAAGAAATTCATATACGACTGCCATTTTCTGAACGTGATCAAGCTGAAGAAAATACAAACAGAGTGATGGGAACGCATGGCTATATGCCTCCAGAATATGTAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAATTGTTATTGAGATAATTAGTGGAAGGAAGATTCGTGGATTTCATGACCCTCACCATCATCTTCTCAACCTTCTTGGGCATGCGTGGAGATTATGGAATGAAGAAAGGCCACTGGAGTTAATGGATGAGATATTAGATGACGGTGGAGACTTATGTTTAGAAATACTGCGGTGCATTCATGTGGGTCTGTTGTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTTGTTTTGATGTTAAATGGTGAGAAGTTGCTACCAAAACCAAGCCAACCTGGCTTCTATATAGGAAAAGATAATATTGCTGACACTGAATCTTCAAAGCAATATGAAAGGTGTTCAATATATGAAGTTTCAATTTCATCCTTAGATGGGCGATAG


Promoter Sequence:
>Vu_11381::LG3:351574-353574(-)
CCGGTCAATCAATTCGTTGTTGAATGATCGCTCCCGGTTCTTGGTTGATTGGGCAGTTAGACAGTACATGATGCTTTCTTTGTTTTCTTTGGTTAGTTTAACTAGTAAGAAATTCACCATTTGATACTCATGTTCAATTCTTTCAAATACAATCAAAACCACAACATTATGTATTCTTGGTGGTCCAAAGACACTGCTATAATGGTGATTTTTCATTAGTCAAAGTTTTGGACATTATAAATAAGAATTTAGCATAAACAAAAGATAAAAATTCTCAAATCAATTCATAACTATTTAAATTTATATTATTTTAATTTCACTTTGAATCATTTTCAAATTTAAATTTATATTTTTTGAATTTTAAGTCTCATATATTTTATTCAGTTTGGATTAAATCTAGATGAATAACATTTTGAATTTTGAAAATATAAAATCAAGGGATGTTCATGTCGAACTAAGTTAGTTTGAGTCTAAACTCACATGAGTCAACCAAAGTAGAAGAATGAGTTGAGTTAGACTAAGCTCATGTCGAACCGAATTGGCTCAGACCCATGTTGAGCGAGTTGATCTAGGTCGAATCGAATCAGACTAGGATTAGGTTGAACTAAGTATGCTCGGGTTGGGTCAAACCTAAGGTTAAGTCCAATCGGGTCGAAAGTTGAGTCGAGATGACCTAGGATGAAGGTCAAGATGAATTGCTCTAAGTCCAAGATGAGCCAAGTCACTTAAGGTTTAAGTTGATTCAAGTTAGCTCTTATTGAGATTAAGGTAAGGCGACCCAAATCCTAGTTGACCGAAGTAGCCGAGTTAAAGTCTAGTTGAACTGATCCAAGTATTATAGAACTAATAGTCAATTCTATTAAGTTCACTAAATTGAATCTAATTGACAAAGTGGATTCAATCTATATTTAATTAAATTTAAATTAGATAAAAAAATCCAAATCTAATTTATTTAGTTAACATTGATGTAGATTACTGTCCAACTTATTAGATGTAGATTATAGTGCAATTTATTAGATCTAGATTGGATTTTGAAAAATCCAAATTCATGATCACCCTTAACCCTAAAAAAAAAGAGTTCAAGAGTTTGTGACGGGCTAAAGATATAGTGCATCTAAACGAACAAGATTTGACGTTTTGTCCAACCTTGTAAGGAACACAATCCTATGTCAAAGAAATTTGTTGGTGAAAGTTTTAAGAAGATACTAAGGTGGGGAAGCTGCAGGGAAAATAGGAGTTAACTTTTATTCAATAGGAGTTATAAACTTAGATAACTTAGATATGCAATAGGAGTTATAAACTTTTATGTTAGTGCCAAAACTTGTATTTCTTTGATCAATACTTTAGTGGGAAAAAAAACATTTTTTTTTATGAAGTGGACAGTGATACATACCATTTGTGCTTATTTTGACTTATTAAGATTCCTTGTCTTATATATGCTAAAATAAATAGTCAGTTGAATACAATAAATATTTATATTTTATTTTTAATATAATAAGAAAAATAAAAGGACAATATGACAATACAAAGACTTGAGGTTTTTCGCAACCTTGTAAAGAACTGAATCCTACGATGATGTCAAAGAAATTGACCGAGAAAAGTTTGGAGAAAATACTAAGGAATGGGTAAGTCAACTGTTGGTAGTTAACTTGCATAAATATGCAATAGACTTTTCAGCTGTTGGTAGTTAACTTGCATAAATATGAAATAGACTTCTCAACTTTCTATTCCTTTGATCAAACTTTAAATAGTTAACGTGTGGCCCCTTAGGCAATATACACCACAGAGTGGAAAATCTCAACCCGGCAATGTACTTAGAATTAATTTCAAAAGCAAAGTTTAAAATGCACAAACTGGCAGAGTTGACCAACCAGTTTGAATGTAATATAGATATTTGATTAAGAGTATGATGGTAGCAGTAACCATCACAAACATACCGAAACACAATGGAGAACCAACAAATTTTCATGCTAATCATTTACACTACTTTCTTTTGTTTC


Gene Sequence:
>Vu_11381(-)
ATGCCCACTTCCTCTACTATCACCCCAAATCAGTCCCTACAATATCCTGAGACACTTGTTTCTTCTGCAGGAACCTTTGAAGCCGGATTTTTTGATTTTGGAAACTCAAGAGGACAATATTTTGGTATATGGTACAAGAACATATCACCTAGGATTATTGTGTGGGTTGCCAACAGGAATGTCCCAGCACAAAACACAACAGCAGTTCTGAAACTTACTCATGAAGGAAATCTTGTCATTCTTGATGGCTCCGGAGGAAGAGTGTGGTCCTCCAACTCTTCAAAAATTGCAGTGAAACCAGTTATGCAGCTTTTAGATTCAGGAAACCTTGTTGTCAAAGATGGAGAGAGCTCAGAGAACTTCTTGTGGGAAAGCTTTGATTATCCTGGAGACACTTTCCTTGCAGGAATGAAACTGAAAAGTGATTTTGTTACTGGTCCATATCGGTATCTCACGTCTTGGAGGGACAGTGATGATCCAGCTGAAGGTGAGTTTTCTTATATGATCGATACAAAGGGCTTTCCTCAGCAAGTTACTACAGACGGAACTACAATTTTGTACAGCACAGGGCCTTGGAATGGCTATCTTTTCAGTGGTGTTTCTTGGGACAGAATGAGCAGATTCTTGAATTTCTCTTTTGAGTTCACTAACAAAGGGGTTTCTTATGGATATGAAATGTTAAACAGTTCAGTGCTTAGTAGAACAATGCTCAAGCTCAATCCAAGAGGGGCTACAGAGCGTTTTCTATGGTCAAACCAAAGACAAAGTTGGGATATTGTAAACAGTCATCCAACAGATCAGTGTGAATATTTTGCCACTTGTGGTGTCAACTCTATCTGCAATGTTAATAATGTTCCAATATGTGAATGCTTGCAAGGTTTCACACCAAAGTTTCAAGCAAAGTGGGATACTCATGATTGGTCTGGTGGTTGTGTCAGAAGAACAAATTTAAGTTGTGATAATGGAGATTGGTTTAAGGAGTACATAGGAATAAAGCTTCCTGAAACGTCTTCTTCCTGGTTTGACAGGAGCTTGAGCCTTCAGGAATGTGAGACATTGTGTTTGAGAAATTGCTCTTGTACTGCATATGCAAATTCAGATATTAGAGATGGTGGGAGTGGTTGTTTGCTTTGGTTCCATGACATTGGGGACATGAGAACTCACCCTGATCGAGGGCAAGAAATTCATATACGACTGCCATTTTCTGAACGTGGTAATTTCATTTCCATTTCCATTTTATGCCTTTTTGTCAGATTTAGTTGAAATATAATTTATGTTAAGTTGGAATCGATAGAAAATAAAGGAATGAAATGGAACATTACTAGGATTCATCAAAGAATGCATTCTATTCTATTCTATTGCATTTAAAACCTTTCCTCCATTGCATTCCATCAAATTTGTAAATTCTATTAGACAACTAAGAGGATGAAATTATAACCATACTGGATTCAGCTTCCCATCAACAAACATATATGGCCAATAGTCATGTGTCAGAAGTTGGAACTAGCGGTTACAAAGTTGAAGTTGTTCTGTACTCCATTTTTGTTTTTCCCTGAATTGTAAGCTTAGAGCTACTTGTGGATTGACACTAATTTCATTCCTCAAATCAAGGAAGGAATAAGAGGGACCGAAATCCAAAGAGACTTGCAGGGATTGTGGTAGGACTTGTTACATTCATAGTTGGACTAACAATTCTTGTGTGGGCGACTTCAAAACGTATAAAAGGGATGAAGCACGTGATGGAGAAGGAAAACAACAGCTTACCGACAATGTTTGATTTTTCAACCATTGATATTGCCACAAATCATTTTTCTAAGACAAACAAGTTAGGAGAAGGTGGCTTTGGAACAGTACACAAGGTAGGTGTTCAAATTTGTTCTTGGTTACCAAGTTATTCATATCGATTCTCAAGTACCAAGTGTTCCAAAATCATTGCTAGGGAACGTTGATAGATGGACAAGAGATTGCAGTTAAGAGACTTTCGAAAACTTCGAGACAGGGAACTGAGCAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTGTTCAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGAATTACTTTATTTTTGGTTTGTTCTTTCACTCCCATCAAATTTTTTGCTTTGATTTTTCTCTTGCCTTCGTGTTATTTTCATGCTAACTTGAGAAAATGAATGTTGCCAGATACAATGAGAGGCAAATTACTAGATTGGACTAAGCGGTTGAAAATTATCGAGGGAATTGCTCGGGGTCTTATGTATCTTCATCAAGATTCGAGACTTACGATAATACATAGAGACATCAAAACAAGTAACATTCTTCTTGATGATAATATGACTCCAAAGATATCAGATTTTGGATTAGCAAGAATATTTGGAGTAGATCAAGCTGAAGAAAATACAAACAGAGTGATGGGAACGCAGTAAGAAACTTAATTTCTGTTTAACAAAGCTATAGTGCTACACAACCACTTTTCCTTACTTTGATACTGTTTTTGCAGTGGCTATATGCCTCCAGAATATGTAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAATTGTTATTGAGATAATTAGTGGAAGGAAGATTCGTGGATTTCATGACCCTCACCATCATCTTCTCAACCTTCTTGGGCATGTAAGCTTGAAGTGGTTTCTTGATAACTTGGTTTCCTTATATCATTTGTTTGTCTAAGTCAAACCTGAAGAATTATGAAACTTAAAATGAAAACTAATTCGTGCATATACTCAATGTAATTGAACTATAGTTGAAAGTAAACTCCACACCAACACTCGTACCCTCCCAAATAATCATCTAAAAGGTTTTGAACACATCATAGGAACATGAAAGTTTGCTTTTAGTTTTATCATCCATTGAAACTCCTGTATGTTTGAATAGAAATTATGAGTAGGGAATGAACTCTCACTCTTGATATTCCTTTTTGTCATATCAGGCGTGGAGATTATGGAATGAAGAAAGGCCACTGGAGTTAATGGATGAGATATTAGATGACGGTGGAGACTTATGTTTAGAAATACTGCGGTGCATTCATGTGGGTCTGTTGTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTTGTTTTGATGTTAAATGGTGAGAAGTTGCTACCAAAACCAAGCCAACCTGGCTTCTATATAGGAAAAGATAATATTGCTGACACTGAATCTTCAAAGCAATATGAAAGGTGTTCAATATATGAAGTTTCAATTTCATCCTTAGATGGGCGATAG