Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11364 LG3 143536 145786 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 143607 synonymous_variant p.Asp24Asp
G/C 143659 missense_variant p.Asp42His
A/C 143688 synonymous_variant p.Arg51Arg
A/T 143769 missense_variant p.Gln78His
T/A 143814 synonymous_variant p.Pro93Pro
G/A 143849 missense_variant p.Arg105His
G/T 143855 missense_variant p.Gly107Val
T/A 144025 missense_variant p.Ile132Asn
T/G 144087 splice_donor_variant&intron_variant
A/T 144129 intron_variant
T/C 144144 intron_variant
G/T 144164 intron_variant
T/C 144372 intron_variant
G/A 144452 intron_variant
C/T 144529 downstream_gene_variant
G/T 144541 downstream_gene_variant
C/G 144543 downstream_gene_variant
C/T 144565 downstream_gene_variant
A/G 144566 downstream_gene_variant
C/A 144572 downstream_gene_variant
C/A 144623 downstream_gene_variant
T/C 144640 downstream_gene_variant
G/A,* 144755 downstream_gene_variant
A/C,* 144759 downstream_gene_variant
T/A 144798 downstream_gene_variant
A/G 144836 downstream_gene_variant
G/C,A 144863 downstream_gene_variant
T/C 144867 downstream_gene_variant
A/T 144869 downstream_gene_variant
C/T 144872 downstream_gene_variant
C/T 144873 downstream_gene_variant
C/T 144883 downstream_gene_variant
G/C,T 144960 downstream_gene_variant
A/T 144967 downstream_gene_variant
G/A 145022 downstream_gene_variant
A/G 145073 downstream_gene_variant
A/G 145127 downstream_gene_variant
T/C 145342 missense_variant p.Leu188Pro
C/T 145353 synonymous_variant p.Leu192Leu
G/A,* 145486 stop_gained p.Trp236*
C/T 145498 missense_variant p.Thr240Ile
C/T 145500 missense_variant p.Pro241Ser
C/T 145501 missense_variant p.Pro241Leu
G/A 145511 synonymous_variant p.Val244Val
G/A 145516 missense_variant p.Arg246His
G/C 145739 missense_variant p.Lys320Asn
A/T 145748 missense_variant p.Lys323Asn
C/T 145779 synonymous_variant p.Leu334Leu
C/A 145783 missense_variant p.Ser335Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11364.1
MTLSMAHGEIVLHHKMLRGRKVIDTVGYSIASGEPEHAGATDDGHLSVLLRYGVPAEHAQGASGVVPFCESEIDEHVQAQVVERGEAKKPLGPPNGLGAEVRAFRHGIVHDESGAEAVGENGEFLMEVRCGIGEKTTCEVGRTELERKGTRTDFGLAKLYEHGAKPSTTRVVGTMGYLAPELTRTRKPTTSSDVYAFGALLLEVVCGRRPIEVKALPEELGLVDWVWERWRMGAPLAVVDPRLGGAFDEVEVLVVIKVGLYCSAETPEKRPSMRQVERYLEREVVPPPRWFTGKKEDGGGGYYEELHNMMF*NEREI*IEASEIMVSIYILCDTV*


CDS Sequence:
>Vu_11364.1
ATGACACTATCCATGGCGCACGGTGAGATTGTACTCCACCACAAAATGCTCAGGGGTAGAAAGGTCATCGATACTGTTGGCTATAGCATAGCCAGTGGCGAACCTGAACACGCCGGTGCCACCGACGATGGGCATCTCTCTGTCCTGCTCCGATATGGGGTTCCGGCCGAGCATGCTCAAGGAGCTTCCGGCGTAGTCCCCTTCTGTGAAAGCGAAATTGATGAGCATGTACAAGCCCAGGTCGTTGAGAGAGGCGAGGCCAAAAAGCCCTTGGGCCCTCCCAATGGGCTTGGAGCCGAGGTCCGGGCCTTCCGTCATGGGATCGTCCATGACGAAAGTGGAGCCGAAGCCGTTGGGGAGAACGGTGAGTTTCTGATGGAAGTTCGATGTGGGATTGGCGAGAAAACGACGTGTGAAGTTGGGAGAACAGAGTTAGAGAGAAAAGGAACAAGAACGGATTTTGGGTTGGCCAAGCTTTACGAGCATGGTGCCAAGCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGAGAAAACCTACCACCAGTTCTGATGTTTACGCTTTCGGAGCGTTGTTGTTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGCCGGAGGAGCTGGGGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGAGGTGGAAGTTTTGGTAGTGATTAAAGTGGGGTTGTACTGTTCCGCGGAGACACCAGAGAAGAGGCCCAGCATGAGGCAGGTGGAGAGGTATTTGGAGAGGGAGGTGGTGCCGCCTCCGCGGTGGTTTACGGGAAAAAAAGAAGATGGTGGTGGTGGCTACTACGAGGAGTTACATAATATGATGTTTTGAAATGAACGTGAAATCTGAATTGAAGCATCTGAAATTATGGTTTCAATTTACATTTTGTGTGATACTGTCTGA


Promoter Sequence:
>Vu_11364::LG3:141536-143536(+)
AACATCATAGATTCAGTTCTCATAGTGTTCACACTTTAATTTATCATATTCCATCATCTTTTCCATCTTTAGGTTCAGGAGTCAAAAATGACGAACGTTCAGTCCACTGAAGAGTAAGGACGAACGTCCAAATGAAGTTACTGGATATTCATGAAGAATATATAACGAACGTAATTTCTGTTTGACCAATTAAATGAACTGACTCGACTTGAAGTGTACTGGTCCTTAGAAAATATTTGAGATAAAAACTTGTACCAGATTTAATGCACAATGGAGGGTCAAGAACACTTAGAATTTATCTTTGAAGAAATTTGTATAGGAAAACCAATGCCAGGAATTTAACGAACGTAAATAAAATGAATAGTTAATACTTTACACGAACGCTATTTTATCAGTTATTTATCCAATCAGTACGAGCGCTTGATATGAGACCTAGTGCGATTCAGGACGGACGCTCATTATAAGACCGAGCGCTATTTAGGACGAACGCTTGGTAGAATACCGTGCGCCATTTAAACGAACGTTCGGTATCAGACCGAACGTTACTAAGGATGAACGTTCGACATAAGGCCGAACGCTATTAAGAACGAACGTTCGACATAAGGCCGAACGCTATTAAGAACGAACGTTCGACATAAGACCGAACGTTCTCGTTTCAGCATTGTTTAATTTAAGGCGTACGACAACTCTATGTTGAGCCGAACGCTCAAACATAGTAACTCAAATGAAGACGCTCGTTCTCACACCGAATTCCTCCCAAATGAAGGAATTCAATTCTAAGTCTTTTCAGGGAAACCGAACGGTATAAGACCGTACGGTGACGAGCGTTAATTTTCATAGGGAATTTATCAGATCCAGATTCTCAAACATCTTAACTTTTAACATTATTCATATGATTCAAACTCTGTAATTTCATATCCGCATTAATTCTCATACTTTATAACATTAATTCACATTATCAAATCCAGCTATATACTACTCATTAATCCTTCATACACATCAAAATCAACATGCAGTACCTCCAAATCAGAAGTCATATTCCATAGCAGTGGTCGTCCATACAGCTTAAACATCATATTTTTCATACAGACAGTCCAGATCATAACAGCTCAACATCATTCTTTCATACATTCAAATCAGATCATACAACATGCAAGTATAAATTAAACATATAAGCTTCCCTTACCCGGATTGCAGTGTACGCCCTAATAATATGACTTCCACACGTTCAACTACAGCTCTTCTATACTCAACAGCCACTTAAGTTTCTTCCTCTAAATCTAACCAAAGAAATGTAGAAAATATCAACTGCTACCCTTGCATGCAACAGAATCTGGGTTCGCAAGAATATCCAGAACTAGGGTATGGATTGGAAACTTACCGTTCACAGAATCAAAAGGGGTTCGGATCAAAATGATGCTCACTGGTTCGCGGACGTTCCTACGGTCTCTGAAAATTGATCGGAGTAGAGAGGAATGAGTAATAGTAGAGAGAAGATGAAGGTTCTTGGAGAGAAGTTGGAGAAGATGAAGAGTTTGCGTTCAGAGAAAAGAGATGAGTGGTGCAGGTGAGAGGAAGAGTTTTCAAAAATCTGGTTTTGTTAATCTCACATCCGTTTGAACGAGCGTGTCCCAAGCTGACACCTGCACACCAAACTCTGAATTAGAAGTTTCTCCCGTGACACGTGACGTGTGTGCATGCAAGACTAGGTGCGTTTTTAATGTTTTTAGAGAAATGATTTGGCTCAGCTTTCCGTGCACAACAGAGATGAAAAATCAGATTTCGGGAGTGGGTCTTAATGGCTGAGAAATGAGTGCATAAGTGATGAGGTGTCATAATTATCTTTGTTAATTATTCAGGGTCTCACAATAAGCAACTGATATTTCTGAATAACCAAAGAGTAGCTACAGTACCACCAGCAATAAAAATACAGTAGATGAAACGTAAAAGCATGTGAGAGGTGAAAGATGAAGCTAAAACCCTAGAAAAACTCTGGTACA


Gene Sequence:
>Vu_11364(+)
ATGACACTATCCATGGCGCACGGTGAGATTGTACTCCACCACAAAATGCTCAGGGGTAGAAAGGTCATCGATACTGTTGGCTATAGCATAGCCAGTGGCGAACCTGAACACGCCGGTGCCACCGACGATGGGCATCTCTCTGTCCTGCTCCGATATGGGGTTCCGGCCGAGCATGCTCAAGGAGCTTCCGGCGTAGTCCCCTTCTGTGAAAGCGAAATTGATGAGCATGTACAAGCCCAGGTCGTTGAGAGAGGCGAGGCCAAAAAGCCCTTGGGCCCTCCCAATGGGCTTGGAGCCGAGGTCCGGGCCTTCCGTCATGGGATCGTCCATGACGAAAGTGGAGCCGAAGCCGTTGGGGAGGTTCTTGGGGGGGTTCACGATCTGCACGATGGAGGGGTTGTTGGCGCTTCGAAGATCATGGTAGAAGAAGTGAAGGTGGGTCTGTTTCTGCGAAGAACGGTGAGTTTCTGATGGAAGTTCGATGTGGGATTGGCGAGAAAACGACGTGTGAAGTTGGGAGAACAGAGTTAGAGAGAAAAGGAACAAGAACGTAAGAGGAACAGCCATTGTTGTTAGCTCTTCTACTGTAACAAAGTGATAAGGTTCACTTTTATAAAGAGACACCTTTGTTTGTTACTATTTTTCATTTCTTTATTACCACAAGGGAACACAAAACCTAAAAGGAGACTTTTTTTTTTCTTTTAAAATATTAATAATCAAATTATATTTTTCTTTGATAACTTATTAAAAAAAATATTAATAATCAAATCATATTGTTTTAATGAATATGACCGTTTGAATTCAATCTTGAAAAGTGTGTATATAACTTTAATATATGTTATCATATAGTTTACTTAATTTGTAAGGACGGAATAAATTATATTTTAAGTATATAGAGATATAGAGATTTATTTTGGAAAATATAAAACTATATTTTAGCGTTTAGAGAATCGATGTTTTGTCTTATATTTAAAACGTGCACCGCCTTCTGTCCCGCAGCATGGCGTCTGAAATTTTGCAACACTCGTGCACCACGCGTATATATAATAGTTATTTATTTATTTTTAGACTTTGATGGCTATTTCTTCCATACAAAGTATGAAATCATAAACTTTATTTAAGATAAGATTCAAGTAAGGAGTTAACTCTCAATTTTGTCTGCTTCAAAGATGTCTTAGATATTCTCTCAATTCATTCAATATTTAAAAGTTGTTTTTGAGATGAAAATGCTAAATACATCTTAAATTCCCTAAAATAAAATGTATTTCTACACCTAAAGTCTTATGGTCGATAATTTATTACAAAAGAGGAAAGAATTTAAATTTAAGATTTAATACCCAATTTTGTCCTCAGTGTAGTTCGAAAATCTCAATTTAGTCTCCTAGTTAGAAAAATAATTATAATGGATCCTTACTTATAAATTTGTGAGTCAAGTTAGTCCCTTCCGTTAAATATAACCAAACGAAGTTAATAGGATGATGATGTGGCAGTAGTTAGTGGTTAGGTGTCAAAACGCAATAGTGTGTGTGCTTACGTGATGTTGAATTAGAGAAGTTTGAGTTTTATCAGAAATTGGGTTTATTTTAATTGGAGATAAATTGGCAGCAGTTAGGGTTTTTAATTAATTTTGTGCAATTGAATAGATACAAAGTTAGGGTTGTAGTGGAATTGTAATATGATTTGAAATGGGAGGTTCAGGGATTTTGGGTTGGCCAAGCTTTACGAGCATGGTGCCAAGCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGAGAAAACCTACCACCAGTTCTGATGTTTACGCTTTCGGAGCGTTGTTGTTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGCCGGAGGAGCTGGGGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGAGGTGGAAGTTTTGGTAGTGATTAAAGTGGGGTTGTACTGTTCCGCGGAGACACCAGAGAAGAGGCCCAGCATGAGGCAGGTGGAGAGGTATTTGGAGAGGGAGGTGGTGCCGCCTCCGCGGTGGTTTACGGGAAAAAAAGAAGATGGTGGTGGTGGCTACTACGAGGAGTTACATAATATGATGTTTTGAAATGAACGTGAAATCTGAATTGAAGCATCTGAAATTATGGTTTCAATTTACATTTTGTGTGATACTGTCTGA