Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11306 LG2 52916879 52919504 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   nitrate assimilation, nitrate assimilation, nitrate assimilation, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, nitrate assimilation
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, cis-regulatory region sequence-specific DNA binding
SNP Position Effect Amino acid change
T/A 52917682 downstream_gene_variant
T/A 52917686 downstream_gene_variant
C/T 52917713 downstream_gene_variant
A/G 52917773 synonymous_variant p.Gln241Gln
G/T 52917858 missense_variant p.Gly270Trp
A/T 52918264 missense_variant p.Glu405Val
A/T 52918713 missense_variant p.Asn522Ile
T/G 52918714 missense_variant p.Asn522Lys
G/A 52918987 synonymous_variant p.Leu613Leu
C/T 52919195 missense_variant p.Arg683Trp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11306.1
MEYGGFSDIFAPETEFMDELFVEGCWVETRVGCGTEASKWNRSMESNGAHIIFEEESEAESLMVGKRWWIGPRGNPGPSSSVKERLVVAVGYLKEYAKNSNMVIQVWVPARRGCEVGIHHHQDFPYTLDYTNNGDATRSFQFHEDRLSDHWPPNIRFLRTHDYTRLHHYDLRPGSLALPVFQRGTGICLGVVDILMPNNVNPDLHNLQGVDFRTPSLQNFIPPAMTGFDELYQGALNEIVQVLTCVCKAHELPLALTWAPCIQQGKSGCGHSNDENYVSTVDPACFVADVDVLGFLEACSEYHLLGGQGVVGTAFTTSKPCFANDITAFTKAEYPLAHHANMFGLHAAVAIPLRSVSSDFVLEFFLPKDCHDTQDQKQILNSLSMLVQQACRSLHVVLDKEEEEELVSHHHHHSKEMESSSWIAHMMEAQQKGKGVSVSLEYLQEPKQEFKVTTNCNEQVFSDLEGTSGAGVGGRRGGRKSGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYTSFPELSSANGVSESPKINSDNSKFYSENGLFSNQGVTSTSSCSQSCNPSLNQSTTLISSNNNNNPEIILMSDKQSVVGASMQVHHPPIPISIPIPIQSLDALPPLPQTSSVWNTGGGTFRVKATFGDEKIRFSLQPNCGFRDLQMEIARRFNLKEMSKIQVKYLDDAQEWVLLTCDADLEECKDINRSSQSRTVRLFLFHASPLNHSTNAFGSTSPT*


CDS Sequence:
>Vu_11306.1
ATGGAATATGGAGGGTTCTCAGATATTTTTGCCCCAGAAACGGAGTTTATGGATGAGCTATTTGTAGAAGGATGCTGGGTGGAAACAAGGGTTGGGTGTGGCACGGAGGCTTCAAAGTGGAACAGGAGCATGGAGTCGAATGGGGCGCACATAATATTTGAGGAAGAATCAGAGGCGGAAAGTTTGATGGTCGGGAAGAGATGGTGGATTGGACCAAGGGGGAATCCGGGGCCATCTTCGTCTGTGAAAGAGAGATTAGTGGTTGCAGTTGGGTACTTGAAAGAATACGCCAAGAACTCCAATATGGTGATTCAGGTATGGGTCCCCGCCCGGAGAGGATGTGAAGTAGGGATTCATCACCATCAGGATTTCCCATACACCCTCGACTATACTAACAATGGGGATGCAACAAGATCCTTTCAGTTTCACGAGGACCGGCTTTCTGATCACTGGCCTCCCAACATTCGCTTCCTCAGAACTCACGACTACACCCGCCTTCACCACTACGATCTACGTCCTGGATCTCTCGCCCTTCCCGTCTTTCAGAGAGGCACTGGAATTTGTCTCGGTGTTGTCGACATTCTCATGCCCAACAACGTCAACCCGGACCTTCACAACCTTCAGGGTGTTGATTTTAGGACCCCTTCTCTTCAGAACTTCATTCCACCAGCCATGACTGGTTTTGACGAGTTATACCAAGGTGCATTGAATGAGATAGTACAAGTGTTGACATGTGTGTGCAAGGCGCATGAGTTGCCTTTGGCTCTGACATGGGCTCCCTGCATCCAACAAGGAAAGAGTGGATGCGGGCATTCGAACGATGAGAATTATGTGTCGACTGTGGATCCAGCATGCTTTGTGGCAGATGTAGATGTATTGGGATTCCTGGAAGCGTGCTCTGAGTACCACCTTTTGGGGGGTCAAGGAGTGGTTGGAACAGCCTTCACAACCTCCAAGCCCTGCTTTGCAAATGACATCACTGCCTTCACCAAGGCTGAATATCCTCTCGCACACCATGCAAACATGTTCGGCTTGCATGCCGCTGTGGCCATTCCTCTCCGGAGTGTTTCCTCTGATTTTGTCCTCGAATTTTTCCTCCCAAAGGATTGCCATGACACCCAAGACCAGAAGCAGATACTCAACTCCTTGTCTATGCTGGTGCAGCAAGCTTGCCGGAGTTTGCACGTTGTACTGGACAAGGAGGAGGAGGAGGAATTGGTATCACACCATCATCATCATAGCAAAGAAATGGAATCATCATCATGGATTGCACATATGATGGAGGCCCAACAGAAGGGGAAAGGTGTGTCCGTGTCTCTGGAATACCTCCAAGAGCCAAAACAAGAGTTCAAGGTGACAACCAACTGCAATGAACAGGTATTCTCGGACTTGGAAGGAACAAGCGGTGCTGGTGTCGGTGGCCGCCGGGGTGGCAGGAAATCAGGCGACAAGAGGCGAACCAAGGCAGAGAAGACTATCAGCTTGCCGGTTCTAAGACAATACTTTGCAGGAAGCCTAAAAGACGCTGCCAAGAGCATTGGGGTATGTCCTACCACTTTAAAAAGAATATGCAGACAACATGGGATCACGAGGTGGCCTTCAAGGAAAATTAAGAAGGTGGGGCACTCCTTAAGGAAACTTCAACTTGTGATCGACTCCGTCCAGGGTGCCGAAGGTGCCATTCAAATTGGCTCCTTCTACACCAGTTTTCCAGAGTTGAGCTCTGCCAATGGTGTTTCTGAATCACCCAAGATAAACAGTGATAATTCCAAGTTTTATTCCGAAAATGGGTTGTTTAGTAACCAAGGAGTTACTTCCACTTCGTCTTGCAGTCAGAGTTGTAACCCCAGTTTGAACCAATCAACCACTCTGATCAGCAGCAACAATAATAACAACCCTGAGATTATTCTGATGTCAGATAAGCAATCAGTAGTTGGCGCATCAATGCAAGTCCACCATCCTCCTATTCCCATTTCCATTCCCATTCCCATTCAAAGCCTGGATGCTCTACCTCCCCTGCCCCAAACCAGCAGTGTCTGGAACACAGGCGGTGGTACTTTCAGGGTGAAAGCTACTTTTGGAGATGAAAAAATTCGTTTTAGCTTGCAACCAAATTGCGGATTCAGAGATTTGCAGATGGAAATTGCAAGACGTTTCAATCTGAAGGAGATGAGCAAAATTCAGGTGAAGTATTTGGACGATGCTCAAGAGTGGGTTCTTTTGACATGCGATGCAGATCTTGAGGAGTGTAAAGACATAAATAGATCATCTCAGAGCCGCACAGTTAGACTATTCCTCTTTCATGCTTCGCCACTAAATCATTCAACTAATGCATTTGGCAGCACCAGCCCCACTTAA


Promoter Sequence:
>Vu_11306::LG2:52914879-52916879(+)
ATTTATCTTTCGTGTATTAAAAATACGTTTAAAATCTGAAATTGATAGTATTCTAGATTTACAATAAACTTTTCCTTTTAATTACCAATTATTTATATACGTGTAATTGAAACACGTAATAAAAAATATATATAATATGTATAAATATCTTATTTAAATAAAAACTAAAAAATGAGTCCCAAAATTTGTATCTATCCTTGAAATCTTGTGATATATATCTTTTGCCATGTTTTCCAACTTCTATTAAAGCCGAACCATCCCTTGACTAAAATAAGCTCAATTAATCTTTAATGTAATATTTTACTACGAAAAAGAAAATCATTAACGTAATAGAATCTCTGGTAACAAGTTGTTTGATGTTGATCCTTATAGGAGTTTATATATAGAGAGAGAGATAGAGAGAGACAGAGAGAGAAAGGATTAACTTAAGTGAAAGTGATCTGTATGAGTTGTCTGAGAATCTTATTTCAACAAATCTGAGCAATAAGAATTATTCCCTTTCATTTTCAAAGAAACCAAAAACCACCGATCTGTCTAGCTTGAATAACCATGCCCAAGGTTTAACAACAGTTCTTATTTTGTTTAAGTTTTCGGTCAATTCATCCACCAATCAGATGGGATCGATTTTCTTTTCACGGTATCAACTTGGAATTCGGATGACGCGGTGCAGTATCATTAAAACCCTTTTTTTTTTGGGTTTAAATCTCAAAATTCTAAATACTTACCATTCCAATTCTTTTACACTTTTTGCACAAAATTTCTACGACTGCCAAGTGGAAGAACATCCTGAGGAAGCCTGCAACTTCAAGTAAGAGCTGTGCCTTTTCTTCAACCCTACCTTCTTCCTAAGGATCTCACATCACACTGTTATCAATAACCATTCACACTCTTTTATTTTTATTTATTTATTTTATACATCTTTTCATATCTCTTACGTTTAGTAATTATTCATCACATTTATATTTTTACCCCTGTTTTCTCTCTATTACTCTCAATTTATGTACATTTCACATTTCACATATCATCACCACTTTACAATTTAACTCATACACATACATTGCATTTCTCTACTATCTTCTTCGTATCTCATATATTTTACTCTGGGTATTTCTTTATTTTTCTCATATAACATTTTTTACGTTTAAGTAAAATTAAGTGAAGCCAAACCACATTTTTTAACATATATTATTATATGTCAATTTTTAAGATTTTCCCTTATATTTTTAAAAGCCTAAAAAGTTTCCTCATAACCTTTTTTGTATGAAAACTATTAATTAAGTCAATGAACCAATGAGCTTAAATAGACTGATAAGATTTATATTTTTATATTATTGTTGGAAATAATTTATACTTTTTATTTAAACATTTTTTTAAAAACAAGCTATACATTTTTAATAAAAAGGTTCGTTAGGCGACACCTCTCAGAGATCGGACTGCAGACTCCGAGGATTTCTAAAGTTAAATAATTTTGTTGGACACATCAGCACATCAATTTTCCAATTAAAAACTCTCAAAATATAAATCTATAGTTGGGTTAATCTAAAGTTAATGAAAATAATAATATTAAAAATAAAATTAACAATAAATAATTAAATTTAAAAATTGATTTAACATTTCGAAATTTGGAGTAACAGGAGATGGCCTAGCAGTAGGGAATAAACATTACTGTTTGGTCAGTTGCTATATTAACGGGAGCGAAGCCTCTCCTACGTTTTTCTAAGCCGTGGGTCCCACTGACCTTCTAGAAAATTTGCAGTTCTCTCCGGGTCATTAAATACAGGACTTTGATGAGCAGGTGACTACTGTATAAGCCGAGTTCTCCGTTCAGATACATACACAACAACATTCCTTGTCTCTCTTCTTCTTCATCTCACTCACTCACTTTTTCTCGTCATGATCGTACCTCATCATCCCATTCTGCCTTGTTTCTGTGTGTGTGTTTGATATATTATTGTATGCTTTTTTAATATATGCAGTGTTTTGAGTTAGTGGAAGGAAGA


Gene Sequence:
>Vu_11306(+)
ATGGAATATGGAGGGTTCTCAGATATTTTTGCCCCAGAAACGGAGTTTATGGATGAGCTATTTGTAGAAGGATGCTGGGTGGAAACAAGGGTTGGGTGTGGCACGGAGGCTTCAAAGTGGAACAGGAGCATGGAGTCGAATGGGGCGCACATAATATTTGAGGAAGAATCAGAGGCGGAAAGTTTGATGGTCGGGAAGAGATGGTGGATTGGACCAAGGGGGAATCCGGGGCCATCTTCGTCTGTGAAAGAGAGATTAGTGGTTGCAGTTGGGTACTTGAAAGAATACGCCAAGAACTCCAATATGGTGATTCAGGTATGGGTCCCCGCCCGGAGAGGATGTGAAGTAGGGATTCATCACCATCAGGATTTCCCATACACCCTCGACTATACTAACAATGGGGATGCAACAAGATCCTTTCAGTTTCACGAGGACCGGCTTTCTGATCACTGGCCTCCCAACATTCGCTTCCTCAGAACTCACGACTACACCCGCCTTCACCACTACGATCTACGTCCTGGATCTCTCGCCCTTCCCGTCTTTCAGAGAGGCACTGGAATTTGTCTCGGTGTTGTCGACATTCTCATGCCCAACAACGTCAACCCGGACCTTCACAACCTTCAGGTTATTATTATTATTATTATTATTTTATGTTGGGTTTATGTTATGACACCGCATTTAACGATTGCGATTAATGAATAGGGTGTTGATTTTAGGACCCCTTCTCTTCAGAACTTCATTCCACCAGCCATGACTGTGAAGGTACGTACGTAAGTGACTGATGAGTAAATTGGATTAATAAATATATATATATATATATATATGGCTGAATATCATATGTATATATCAGGGTTTTGACGAGTTATACCAAGGTGCATTGAATGAGATAGTACAAGTGTTGACATGTGTGTGCAAGGCGCATGAGTTGCCTTTGGCTCTGACATGGGCTCCCTGCATCCAACAAGGAAAGAGTGGATGCGGGCATTCGAACGATGAGAATTATGTGTCGACTGTGGATCCAGCATGCTTTGTGGCAGATGTAGATGTATTGGGATTCCTGGAAGCGTGCTCTGAGTACCACCTTTTGGGGGGTCAAGGAGTGGTTGGAACAGCCTTCACAACCTCCAAGCCCTGCTTTGCAAATGACATCACTGCCTTCACCAAGGCTGAATATCCTCTCGCACACCATGCAAACATGTTCGGCTTGCATGCCGCTGTGGCCATTCCTCTCCGGAGTGTTTCCTCTGATTTTGTCCTCGAATTTTTCCTCCCAAAGGATTGCCATGACACCCAAGACCAGAAGCAGATACTCAACTCCTTGTCTATGCTGGTGCAGCAAGCTTGCCGGAGTTTGCACGTTGTACTGGACAAGGAGGAGGAGGAGGAATTGGTATCACACCATCATCATCATAGCAAAGAAATGGAATCATCATCATGGATTGCACATATGATGGAGGCCCAACAGAAGGGGAAAGGTGTGTCCGTGTCTCTGGAATACCTCCAAGAGCCAAAACAAGAGTTCAAGGTGACAACCAACTGCAATGAACAGGTATTCTCGGACTTGGAAGGAACAAGCGGTGCTGGTGTCGGTGGCCGCCGGGGTGGCAGGAAATCAGGCGACAAGAGGCGAACCAAGGCAGAGAAGACTATCAGCTTGCCGGTTCTAAGACAATACTTTGCAGGAAGCCTAAAAGACGCTGCCAAGAGCATTGGGGGTACGTGGGAGACACATACATGCTCATTCATATTCTATCAATTTCCTCGTTACTATTATAGTGTTGCTATTCATAATTCTCTTCTTCTGATTGCAGTATGTCCTACCACTTTAAAAAGAATATGCAGACAACATGGGATCACGAGGTGGCCTTCAAGGAAAATTAAGAAGGTGGGGCACTCCTTAAGGAAACTTCAACTTGTGATCGACTCCGTCCAGGGTGCCGAAGGTGCCATTCAAATTGGCTCCTTCTACACCAGTTTTCCAGAGTTGAGCTCTGCCAATGGTGTTTCTGAATCACCCAAGATAAACAGTGATAATTCCAAGTTTTATTCCGAAAATGGGTTGTTTAGTAACCAAGGAGTTACTTCCACTTCGTCTTGCAGTCAGAGTTGTAACCCCAGTTTGAACCAATCAACCACTCTGATCAGCAGCAACAATAATAACAACCCTGAGATTATTCTGATGTCAGATAAGCAATCAGTAGTTGGCGCATCAATGCAAGTCCACCATCCTCCTATTCCCATTTCCATTCCCATTCCCATTCAAAGCCTGGATGCTCTACCTCCCCTGCCCCAAACCAGCAGTGTCTGGAACACAGGCGGTGGTACTTTCAGGGTGAAAGCTACTTTTGGAGATGAAAAAATTCGTTTTAGCTTGCAACCAAATTGCGGATTCAGAGATTTGCAGATGGAAATTGCAAGACGTTTCAATCTGAAGGAGATGAGCAAAATTCAGGTGAAGTATTTGGACGATGCTCAAGAGTGGGTTCTTTTGACATGCGATGCAGATCTTGAGGAGTGTAAAGACATAAATAGATCATCTCAGAGCCGCACAGTTAGACTATTCCTCTTTCATGCTTCGCCACTAAATCATTCAACTAATGCATTTGGCAGCACCAGCCCCACTTAA