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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11192 LG2 51982227 51984813 PREDICTED: proline-rich receptor-like protein kinase PERK7
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 51983000 synonymous_variant p.Leu193Leu
T/A 51983577 missense_variant p.Ser334Thr
A/G 51983610 missense_variant p.Asn345Asp
T/A 51983705 upstream_gene_variant
T/A 51984357 missense_variant p.Cys461Ser
C/T 51984804 synonymous_variant p.His576His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11192.1
MASDSNSDSPPPPDSSPPPPPPPDNSSPPPPSQDNSPPPPSSRSDKKSPPPPSNSSPSPPPPPPPPPPPPDKKSGNRESPPPPHSGHHFSPPPPSKNRLSPPKSSSSSSSGDSGNQSLSTPIIIVIAAAAVIFLLLLLMVIFACIKRKKKSQLPIDYCHNQPDDGFHKSEFGYNNNKVEHVMHIPPYPVPVGGWSATQGVSSDMSTASYSGPHGPVLPPPHPTVALGFNQSSFTFEELSAATAGFSQHNLLGQGGFGFVHKGVLPNGKEIAVKSLKSTNGQGDREFQAEVDIISRVHHRHLVSLVGYCISQSNKLLVYEFVPNNTLEYHLHRKGQPVMDWNTRLKIAIGSAKGLAYLHEDCHPRIIHRDVKGANILLENNFEAKVADFGLAKISQDTSTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSFGIMLLELITGREPVDNTGEFEDSLADWARPLCTKAMEDGSFEGLVDQRLEGNYDERQMSCMVACAAFSVRYSAKKRPKMSQIVRVLEGDVSVEVLGYEGVKPGFGGESGEYKADMMKFRKLALEESGSEQSSAEYGNAGRRVGARMHTP*


CDS Sequence:
>Vu_11192.1
ATGGCTTCTGATTCCAATTCCGATTCCCCACCACCACCAGATTCATCACCCCCACCCCCACCACCGCCGGACAATTCATCTCCTCCCCCACCGTCACAGGACAATTCACCCCCTCCTCCCTCGTCAAGAAGCGATAAGAAATCTCCGCCCCCGCCGTCTAATTCATCTCCATCTCCACCTCCGCCACCACCACCACCACCTCCTCCTCCTGATAAGAAATCAGGTAACCGCGAGTCACCGCCGCCCCCACATTCTGGCCATCATTTTTCTCCTCCTCCACCTTCAAAGAACCGGTTGTCTCCACCCAAGTCATCATCTTCAAGCTCGTCAGGAGACAGTGGAAACCAATCATTGAGCACGCCAATTATAATAGTAATCGCAGCAGCAGCTGTGATTTTTCTCCTTCTCCTCCTCATGGTCATCTTTGCGTGTATAAAAAGAAAAAAGAAATCTCAGTTACCCATTGATTACTGCCATAATCAACCTGATGATGGGTTTCACAAAAGCGAGTTTGGGTACAACAACAATAAGGTTGAGCACGTTATGCATATTCCTCCATATCCAGTTCCAGTTGGAGGTTGGTCAGCAACCCAGGGTGTTAGTTCTGACATGAGCACTGCCAGTTACTCTGGGCCCCATGGTCCCGTTTTGCCACCTCCGCACCCCACGGTGGCTCTCGGATTCAACCAAAGCTCCTTCACTTTCGAGGAGCTCTCGGCTGCCACTGCTGGCTTTAGCCAACACAACCTGCTGGGCCAGGGTGGCTTCGGATTCGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTCAAATCCACTAATGGCCAAGGAGACAGAGAATTCCAAGCTGAGGTTGACATCATCAGCCGCGTCCACCATCGCCATCTCGTCTCTCTCGTCGGCTATTGCATCTCACAATCCAACAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCCTCGAATACCACCTTCATCGAAAGGGTCAACCTGTGATGGATTGGAATACCAGGCTAAAAATTGCGATCGGATCGGCTAAAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATCATTCACCGAGACGTAAAGGGTGCAAACATTCTACTTGAAAACAACTTCGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGATTAGTCAAGACACTTCCACTCACGTTTCCACTCGTGTAATGGGAACATTCGGGTATTTGGCTCCAGAGTATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTATTATGCTTTTGGAGCTCATAACAGGTCGGGAACCTGTGGACAACACTGGGGAATTTGAAGATAGTTTGGCCGACTGGGCTAGACCACTCTGTACAAAGGCAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCAACGTTTAGAGGGTAATTATGACGAGCGCCAAATGTCATGTATGGTGGCTTGTGCTGCATTTAGCGTAAGGTACTCGGCAAAGAAGCGACCGAAAATGAGTCAGATTGTGAGAGTGCTGGAGGGTGATGTGTCAGTAGAAGTGCTTGGTTACGAGGGAGTGAAACCTGGGTTCGGCGGCGAAAGCGGGGAATATAAAGCTGACATGATGAAGTTCAGGAAACTAGCATTAGAAGAGAGTGGCAGTGAACAATCATCTGCTGAATATGGCAATGCCGGCAGGAGGGTAGGAGCCCGAATGCACACTCCTTAA


Promoter Sequence:
>Vu_11192::LG2:51980227-51982227(+)
AACCAAGACCTAATGTTTCAGCTTATGGTGATAACAACATGGATGCAAAGAAAAAGAAAGATGTTGAAGGAGATTTTGAACCAAGACCTAACGTGTCAGCTTATGATAATGATAACATCAAAGAGAAGCAAGAGGATAAAATTATACCAAATTTTCAATTTACCTATGACGAATAAACGAAGAAAGCTATAACTACTATCAATGATATCACTTAATAATAAAGTTTGTGTGCAATGTATCCAATGAATAATATGAAATAGTATATTATGGTTTTTATTTAAAGAATTATGATTATAGTTGATTGCTTATTATGGTTAAGAAAATAAAAAATATAACTTATTTGAAGGTAGATTATTAATAAAAAAATCACAACAAAATGGAATTAAATTTTTGTTTTAACTTTTTTTGAAAAGTTAAAACCTATTCTCTACCATAATTTTTCAAGGAATCAATAATCAGTTGAAATATTTTCTGAATTAACTTAAATCATTCTGGGATGTAGCACTTGCATAATTTGGTTATTTGAAGACTCTATACGAGTTCTGATAGCTCAGAAAATTCACTGACCTTTCCAAATTTTACTAAATGCATCATCAAGAGATGGTGTTTTCTGCTGATGGTCATTGTATCTGTTGATTTATAAGGAGTTCTGTGGCTGTTTTGTGTTGATTGATTTTGCTGTCTGTCATTTAGTTAGCAATAAGATGATCAACTGTTTAAACATTTTTTGAACTTTTAGCTAGTGATTGCGTTTTGTTGGAAGACCAGGGTTATGATTGTTAATTTCCTACTCAGTTGTATGATGTGTCTGACGCGCAGATTTTTATCTATGTACCAATTGCTTCAGTAATGGAAAATTTGGCTCTGGCATGTCTTCCTTGGAGTTTTTACTCAGGAGACTCTCTTGCTCGATGAAGCATTATTATGAAGAAAATTGGAATGAAATTTCAGAATACGTTGCAACAAAATCAAAAATCTCATAGTATATTACACATTGTTCAAATGCTAATTGAGGATGCCTATGTTGATTGTCGCATAGAAAAAAAAATATTACACACCAATTTTTCTTACACTTCTCTTTTTTTTTTGTCTTACCTTCTCTAAATTTCACTCTCTAGTACCAGTCAGTTGTTTTGGACAAATGTTTCTTGGAAAAATCTAAATGCCCGTCTATGAATATATTTTTTCACGCAAAATATAGACATTTTTTAGTAATCGTATCTAATATTTGACATCTATTTTTTATGATCAGAGTCTAAATCAGGATCATATTTATATTTAAATGATTTATTTTGTATAATTAATTTAACATAATATTAGTTCATCACGCTCCATGAAAAAAGAAATGAACTTTGGCCAACACGTAGTCATCGGGCCAGACAGTCGCATTCAACTTCAACACGATCGATTTTGAATCTTCTGTAATGGGTCCGACGCTGCCCTCCAACAAAGCAATAAGATGCACATTTTGAATTGGTTGCGACCAACAGAATCCAGAAAAAGGAATATGAGCGATTTATCGAAGATTGTCGTAAGTTTTGGTTTAACTATTAACGCTAAAAGTAGATAAAAAAACTGAAAGCATGCATGGCTGGATTATCTAATTAGGTTAAAGATAGGAAGAGAAACGTTGCAGTGAAAAATGAATTATACGCTGCATTGTAGGTGACATTTTTTGGTTCCATATTACAATATTGCATAATAATTATTCACCATGCTTCTCTCTTTCTGTGGATAACCCTCCTGTCCTTTGCTCTCAGGTAGCATTCTCTTTTCTTACGTACGTACCCCCTCGTGCATGCATGCATGCAAAAAATATCAGCATGCACCTTCGTATATTCCCGCCTTCAAAATCAAAACATGCACAAGGATATATGTTTATACAATTTGTTTACTGTGGCAGGTTTCGCAAGTTGCAGAATCCTTACGTGAGGGAGAGGGCCAGGTTTCTCTCTCTCTTTAACCTTCCCTTCCGTTGGAGAAGAAGTCATCCTTCCAAA


Gene Sequence:
>Vu_11192(+)
ATGGCTTCTGATTCCAATTCCGATTCCCCACCACCACCAGATTCATCACCCCCACCCCCACCACCGCCGGACAATTCATCTCCTCCCCCACCGTCACAGGACAATTCACCCCCTCCTCCCTCGTCAAGAAGCGATAAGAAATCTCCGCCCCCGCCGTCTAATTCATCTCCATCTCCACCTCCGCCACCACCACCACCACCTCCTCCTCCTGATAAGAAATCAGGTAACCGCGAGTCACCGCCGCCCCCACATTCTGGCCATCATTTTTCTCCTCCTCCACCTTCAAAGAACCGGTTGTCTCCACCCAAGTCATCATCTTCAAGCTCGTCAGGAGACAGTGGAAACCAATCATTGAGCACGCCAATTATAATAGTAATCGCAGCAGCAGCTGTGATTTTTCTCCTTCTCCTCCTCATGGTCATCTTTGCGTGTATAAAAAGAAAAAAGAAATCTCAGTTACCCATTGATTACTGCCATAATCAACCTGATGGTATTTTTTTTTTATATTAAAGACAAATCCATGTGATGAACTTGGATTTGAGCACTCTTTTATTATCACTTCAAAGTTCTTAGAAATTATAGATGATGTCAATATCATTCTTATTTTTTCCATTTAAAATTTGTGAACTGCTGTGTTCTTCGAACAATTATAAGATGGTTGACGAATAATAATGGGTACATGCAGATGGGTTTCACAAAAGCGAGTTTGGGTACAACAACAATAAGGTTGAGCACGTTATGCATATTCCTCCATATCCAGTTCCAGTTGGAGGTTGGTCAGCAACCCAGGGTGTTAGTTCTGACATGAGCACTGCCAGTTACTCTGGGCCCCATGGTCCCGTTTTGCCACCTCCGCACCCCACGGTGGCTCTCGGATTCAACCAAAGCTCCTTCACTTTCGAGGAGCTCTCGGCTGCCACTGCTGGCTTTAGCCAACACAACCTGCTGGGCCAGGGTGGCTTCGGATTCGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTCAAATCCACTAATGGCCAAGGAGACAGAGAATTCCAAGCTGAGGTTGACATCATCAGCCGCGTCCACCATCGCCATCTCGTCTCTCTCGTCGGCTATTGCATCTCACAATCCAACAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCCTCGAATACCACCTTCATCGTGCGTTCTCTCTTTCTTTCTAACATTTCTTCAATTTTCCTCTTAGCCCTAACTGCACCAATTTTATATAATTCAACCTACTGGGTTCCATGAATACTTTTCTTTACACCGTTTATTGTATCTATACGATGAAAACCTGTCAACTTTTTTTCAGGAAAGGGTCAACCTGTGATGGATTGGAATACCAGGCTAAAAATTGCGATCGGATCGGCTAAAGGACTTGCTTATTTACATGAGGATTGTAAGTTATCTCTGACTATTCTTTTAACGATTAACGATGAGGCCAACGTTAACATGACCTCTAACATTAACTAGGTCACCCTCGTATCATTCACCGAGACGTAAAGGGTGCAAACATTCTACTTGAAAACAACTTCGAAGCCAAAGTAAGTATATCGATCAAATTTCTCTGTCTAAGCGTTTCTTCTGGGATTACTTAATTAACAATTGGATCTATCCATTCAGGTGGCAGATTTTGGGTTGGCAAAGATTAGTCAAGACACTTCCACTCACGTTTCCACTCGTGTAATGGGAACATTCGGGTAAGAAATTAAACTGTAAATTATGTATGATACGTTTTTTCAAGTTTCAAGCAATGAAAGTGAATTAGTTTGCCAAACATTTCAGGTATTTGGCTCCAGAGTATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTATTATGCTTTTGGAGCTCATAACAGGTCGGGAACCTGTGGACAACACTGGGGAATTTGAAGATAGTTTGGCCGACTGGGTAAGTATATATAGTTTTTAATTAATTCCCACATACTTTCAATAACTTTAGATTTCTAATTAATTTGAACCTTTCAGTTTGGGAGTTTGTGAATGTTTCCCATACTTATAATATAATAATGTCTACTTGTTCCATATCTATCTATGTGCATGAACAGGCTAGACCACTCTGTACAAAGGCAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCAACGTTTAGAGGGTAATTATGACGAGCGCCAAATGTCATGTATGGTGGCTTGTGCTGCATTTAGCGTAAGGTACTCGGCAAAGAAGCGACCGAAAATGAGTCAGGTAATACTAATCATGGTTTATTATTTATCATACTGCATTCATTTGACTTTCATGTTCTCTTTTTAACTTAAATTATGATGGATATGAATGAATGAATTAGATTGTGAGAGTGCTGGAGGGTGATGTGTCAGTAGAAGTGCTTGGTTACGAGGGAGTGAAACCTGGGTTCGGCGGCGAAAGCGGGGAATATAAAGCTGACATGATGAAGTTCAGGAAACTAGCATTAGAAGAGAGTGGCAGTGAACAATCATCTGCTGAATATGGCAATGCCGGCAGGAGGGTAGGAGCCCGAATGCACACTCCTTAA

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