Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10879 LG2 49245045 49248360 PREDICTED: putative receptor protein kinase ZmPK1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 49245295 missense_variant p.Leu84His
A/C 49245334 missense_variant p.Glu97Ala
C/T 49245339 missense_variant p.His99Tyr
T/C 49245367 missense_variant p.Leu108Pro
G/A 49245530 synonymous_variant p.Glu162Glu
G/C 49245650 missense_variant p.Leu202Phe
A/T 49245967 missense_variant p.Asp308Val
A/C 49245969 missense_variant p.Asn309His
A/C 49246186 missense_variant p.Tyr381Ser
C/T 49246189 missense_variant p.Pro382Leu
A/T 49246339 missense_variant p.Glu432Val
A/T 49246348 missense_variant p.Tyr435Phe
T/C 49246727 synonymous_variant p.Ile561Ile
C/T 49246824 downstream_gene_variant
A/T 49246912 downstream_gene_variant
C/T 49246913 downstream_gene_variant
C/T 49247023 downstream_gene_variant
A/G 49247185 intron_variant
A/T 49247282 missense_variant p.Lys601Met
G/A 49247495 intron_variant
C/T 49247502 intron_variant
T/C 49247533 intron_variant
C/T 49247722 intron_variant
C/T 49247738 intron_variant
T/A 49247780 intron_variant
G/T 49247788 intron_variant
C/A 49247815 intron_variant
T/C 49247826 intron_variant
A/T 49247993 missense_variant p.Asn638Ile
A/C 49248003 synonymous_variant p.Pro641Pro
G/A 49248027 synonymous_variant p.Gln649Gln
G/T 49248049 missense_variant p.Asp657Tyr
A/T 49248076 missense_variant p.Ser666Cys
G/A 49248158 missense_variant p.Arg693His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10879.1
MSMQLSSSAVEILHQGSSLLVEGPNDFMLSPNAIFCAGFYAVGQNAYSFAVWYSQTNGETQDATVVWMANRDYPVNGKGSKLSLLPNGNLALRDADESHVWSTNTVSLLSVQLFLDNTGNLVLLETKGGGVVLWQSFDFPTDTLLPQQVFTRYAKLVSSRSESNKSSGFYSLFFDNDNVLRLLYDGPEVSGLYWPNPWLATLDAGRSTYNNSRVAVMDTLGNFSSSDDFSFLTSDYGTLIQRRLVLDHDGNIRVHSRRNGGEKWSVTWQAKAKPCSIHGICGPNSLCSYHQNSSMKCSCLPGYKWKNDNDWSFGCEPKFSTLCNKTQSRFLHISRVELYGYDYGILTNYTLHQCQQLCLQLCDCKGIQYTYVFGSGTYTCYPKLQLRNAYQIPYFNADLYLKLPANSSYSFEGSTHEQSLDCSSSLSTMQLERAYDMIHESRYVKFLLWFVGGLGAFEVLCIFVICFFLVRTRERKYSGVDRRVYHLAMTGFRKFSYSELKQATKGFREEIGRGAGGVVFKGVLLDQRVAAVKRLKDANQGEEDFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEQGSLAENMDWVGEILKPNVKGVYEEDKIEALVRAALQCVEEEKEKRPTMSQPCIHFHNLLPSLCIKAMQNDDVPPLDQAFCTDFLSSMPTFNNNTNELQRAKLHALRLENLLRDLRPRDHHQIPHHYFHVPQELHATFILGPGQKLNIHVTAGGFLLLRHRKLRSHLHLPRIPFSVFGA*


CDS Sequence:
>Vu_10879.1
ATGTCTATGCAACTTTCATCTTCAGCAGTAGAAATCCTGCATCAAGGTTCATCCCTCTTAGTGGAGGGCCCCAACGATTTCATGCTCTCACCAAATGCCATCTTCTGTGCCGGTTTCTATGCAGTTGGCCAAAACGCATATTCATTCGCTGTTTGGTACTCCCAAACCAACGGCGAAACCCAGGATGCAACCGTCGTATGGATGGCTAACCGTGACTACCCCGTTAACGGCAAGGGCTCGAAGCTTTCCCTTCTTCCCAACGGCAACCTCGCCTTAAGGGACGCCGACGAATCCCACGTTTGGTCAACAAACACCGTTTCACTGTTGTCTGTGCAACTGTTTCTCGACAACACTGGCAACCTCGTTCTGCTTGAAACGAAGGGTGGCGGTGTCGTATTGTGGCAGAGCTTTGATTTCCCTACGGACACGCTTTTGCCTCAACAAGTGTTCACGAGATACGCGAAGCTGGTCTCTTCTAGAAGCGAGAGCAACAAGTCCTCCGGTTTCTACTCCTTGTTCTTCGACAACGACAACGTTCTTCGTCTTCTTTACGATGGTCCTGAAGTTTCTGGCCTTTACTGGCCAAATCCATGGTTGGCCACTTTGGACGCTGGACGATCCACTTACAACAACAGTAGAGTTGCGGTGATGGACACACTTGGCAATTTCAGTTCTTCAGATGATTTCTCTTTTTTGACTTCCGATTATGGCACTCTGATCCAAAGAAGATTAGTGCTTGATCATGATGGAAACATTCGTGTTCATAGTCGCAGAAATGGAGGAGAGAAATGGTCTGTTACGTGGCAAGCCAAAGCAAAACCGTGTAGTATTCATGGTATTTGTGGCCCTAACAGTTTGTGCTCTTACCACCAAAATTCTAGTATGAAGTGCTCTTGCCTTCCCGGGTACAAGTGGAAGAATGATAACGATTGGTCTTTTGGATGTGAACCGAAATTCTCTACTCTTTGCAACAAAACACAGTCTCGGTTTTTGCATATAAGCCGCGTGGAGTTATATGGCTATGACTATGGGATTTTGACAAATTACACTCTCCATCAGTGTCAGCAGTTATGCCTTCAATTATGCGACTGTAAAGGCATTCAGTATACATATGTCTTTGGCAGTGGCACTTATACTTGTTACCCAAAGTTGCAGCTACGGAATGCGTATCAGATACCGTATTTCAACGCTGATTTGTACCTGAAACTTCCAGCAAATAGTTCATATTCTTTTGAAGGATCCACACATGAGCAGAGTCTTGATTGTTCTTCGAGTTTGAGCACGATGCAGCTTGAGAGAGCGTATGACATGATTCATGAGAGCAGATATGTTAAGTTCTTGCTTTGGTTTGTAGGAGGATTGGGGGCGTTCGAAGTTTTATGCATATTTGTGATTTGTTTTTTTCTGGTGAGAACAAGGGAGAGAAAATATTCTGGTGTGGATAGACGAGTCTATCATTTGGCCATGACTGGTTTCAGAAAGTTCAGTTATTCTGAACTGAAACAAGCCACGAAAGGGTTCCGTGAGGAGATAGGAAGGGGTGCAGGAGGGGTTGTATTCAAAGGTGTGTTGTTGGATCAACGAGTTGCAGCTGTGAAGAGACTGAAGGATGCGAATCAAGGAGAAGAAGATTTCCTGGCAGAAGTAAGCAGCATTGGAAGGCTTAACCATATGAACTTGATTGAGATGTGGGGGTATTGTGCTGAGGGAAAACACAGACTCTTGGTGTATGAGTACATGGAGCAAGGGTCTCTAGCAGAAAATATGGATTGGGTTGGTGAAATATTGAAACCCAATGTAAAAGGAGTTTATGAGGAAGATAAGATCGAAGCTTTGGTGAGAGCGGCTCTGCAATGCGTTGAAGAAGAAAAGGAGAAGAGACCCACAATGAGTCAACCATGCATCCACTTCCACAATCTGCTACCATCCCTTTGCATTAAAGCCATGCAGAACGACGACGTACCTCCGTTAGATCAGGCTTTTTGCACCGATTTCCTCAGCTCAATGCCCACCTTTAACAACAACACTAACGAGCTCCAGCGAGCCAAACTCCATGCCCTGCGTCTAGAGAACCTTCTTCGCGATCTCCGACCAAGAGACCACCACCAAATTCCACATCACTACTTCCATGTCCCTCAAGAACTCCATGCAACTTTCATTCTCGGCCCTGGCCAAAAGCTCAACATTCATGTCACTGCAGGAGGCTTTCTTCTGTTACGCCATCGGAAGCTCCGTTCCCACCTCCACCTCCCTCGCATACCATTTAGTGTCTTTGGTGCATGA


Promoter Sequence:
>Vu_10879::LG2:49243045-49245045(+)
TATTATTTAATTATATTGTGATCATAATAATTGAATGACAAATCTCCATTGATGTGGTTAAGATGCCTTCCAGTTTTTCTGACGGCTGCCTTCCAGTTTTTCTGACTGCTATTATCATTATTGAACTATTATGTATTTTAATCTTAACAACATTATGATTATTATTAAATATAGTCATGAAGTAGACTACTACTATTATTATTGTTATTATTAAATGTTTTTATGCTATTCAAATAATAATCATAAAACGTTGAATATAAAACAAATTTTAGAAAATAGTACCATCTTATACGAGTTCAAAGTCTACGATAGGAATGATTTATATATCTTTTAAAAAAACATCAAAGTGTTCTAATTAGATTGATTTATAAATCTTTTGAATAGGAATGAAGTCATTTTGAGTTATTTATCCAATTTACATTAATTTTTGATAATCCAAAAAATTAAATTAAAATAATTTTATATTTAACATTAATATCCCATAAGTTAAATTGGAAGCTTCTATTAAGCAGACCAAATTCATTTTTTTATAAATTCAAAATGTGATGTTTTACATTAAATAAACTTTTTTATTTAATTGGACTTTCTATCTATAATACAATATATAAGAACATGAGTAAGGGTAGAATGAGTAACGGTAGAATGATACATATTTACATTTATTTAACATATATTATTAGAATAAAATAGTTATAGAACAGTGAATTTTTATATTTTTAGAAAAAAATTTATATATTGACATATATAATTTTTTTACAGTCAATTTATTATTATAATTTCTTATTTTTTTACTTTTTTTTAAATTACAAAAATGTATTCTTTTACTATATTTTATCCTAAATTGCGTGTTTATATATATTTTTTAAAATATATATGATTCAAAATATTTTTATCTAAAGTGGGACTCACCAACATCGTGGGATGATGACACACCAAAACACCTTGTTGAGCAATGTACAAGGAGAATTTGTCATCTTCCTCAAACTGTCTATTGTACTCTTTTTCCCTTTGTCTTTTTCACAACAATGGAATACTCTAATTTATTGGTATCAAAAGTTTTGTCAACTAAAAATTGTGGTTGGTATAATCTTTAAAACAATTATTATTATCATAATCAACAAATTTGTTAGTGTATCATTTGAACAAGAGTGTAAAAATTCTTATAAAGACTATTTATTCTAAAGATTATACATTCCGTTGCAATTAATTTATGGATTTTTTCACCAAAGTAGGCAAATATGCCTCTAATATTACTAAAACGGGCAAATTCAAACCATATTACGAAAATGGGGAAGTCGTGGGGGTCCAAACGACTTCTACTGAAGAAGTCGTGCCCCCCTGCACGATTTCACACTGTTTATATGAACAGTGTTGAAGTCGTGTATCCGAAAAACGACCTATGATGACGGTAATCGATTACAACGTAATGGTAATCGATTACAGATTGTTGAAATCGTGACCACGCTGCACGACTTCAAATTAGTATGCCAAAAACGCACTGGTAATCGATTACAACACTTGTGTAATCGATTACCAGGTTGTATTTGGTGCAAGATTCATTCTGGTAAGCGATTACAAGATTGTTGTAATCGATTACGAGTGTGTTTCTTGGTATTAAACTATTCCAAAATACTGAATTCCTCGATGGTTGACTTGAAAAGACGACAGTGACATGTAAGAGAAAAATATTGTCAATACATCCTATGATTCTTTTGATGACAACATAATTATCACTATCAAAGAGTCTGCGCAAGGAAGCAGAAGGAAGCCAATGCCAAAACCACGAAGCAACTATTTGAATATGAAGCTAAATCAATAGTCAGCTGATGAGATGAAGGGACTCGAAACTCTATATAAAATGAAAGCGTATACCTTAGTGGACACAATTACAGGCAGTAGAAATATATATGCGTTGAGAGTGATGAAGGTAGATTATTGTTAACGGTGGAATACTTTTCACTGAATTGTTACCATGTGGTTCATCCTTCTCTCTCTCGTTA


Gene Sequence:
>Vu_10879(+)
ATGTCTATGCAACTTTCATCTTCAGCAGTAGAAATCCTGCATCAAGGTTCATCCCTCTTAGTGGAGGGCCCCAACGATTTCATGCTCTCACCAAATGCCATCTTCTGTGCCGGTTTCTATGCAGTTGGCCAAAACGCATATTCATTCGCTGTTTGGTACTCCCAAACCAACGGCGAAACCCAGGATGCAACCGTCGTATGGATGGCTAACCGTGACTACCCCGTTAACGGCAAGGGCTCGAAGCTTTCCCTTCTTCCCAACGGCAACCTCGCCTTAAGGGACGCCGACGAATCCCACGTTTGGTCAACAAACACCGTTTCACTGTTGTCTGTGCAACTGTTTCTCGACAACACTGGCAACCTCGTTCTGCTTGAAACGAAGGGTGGCGGTGTCGTATTGTGGCAGAGCTTTGATTTCCCTACGGACACGCTTTTGCCTCAACAAGTGTTCACGAGATACGCGAAGCTGGTCTCTTCTAGAAGCGAGAGCAACAAGTCCTCCGGTTTCTACTCCTTGTTCTTCGACAACGACAACGTTCTTCGTCTTCTTTACGATGGTCCTGAAGTTTCTGGCCTTTACTGGCCAAATCCATGGTTGGCCACTTTGGACGCTGGACGATCCACTTACAACAACAGTAGAGTTGCGGTGATGGACACACTTGGCAATTTCAGTTCTTCAGATGATTTCTCTTTTTTGACTTCCGATTATGGCACTCTGATCCAAAGAAGATTAGTGCTTGATCATGATGGAAACATTCGTGTTCATAGTCGCAGAAATGGAGGAGAGAAATGGTCTGTTACGTGGCAAGCCAAAGCAAAACCGTGTAGTATTCATGGTATTTGTGGCCCTAACAGTTTGTGCTCTTACCACCAAAATTCTAGTATGAAGTGCTCTTGCCTTCCCGGGTACAAGTGGAAGAATGATAACGATTGGTCTTTTGGATGTGAACCGAAATTCTCTACTCTTTGCAACAAAACACAGTCTCGGTTTTTGCATATAAGCCGCGTGGAGTTATATGGCTATGACTATGGGATTTTGACAAATTACACTCTCCATCAGTGTCAGCAGTTATGCCTTCAATTATGCGACTGTAAAGGCATTCAGTATACATATGTCTTTGGCAGTGGCACTTATACTTGTTACCCAAAGTTGCAGCTACGGAATGCGTATCAGATACCGTATTTCAACGCTGATTTGTACCTGAAACTTCCAGCAAATAGTTCATATTCTTTTGAAGGATCCACACATGAGCAGAGTCTTGATTGTTCTTCGAGTTTGAGCACGATGCAGCTTGAGAGAGCGTATGACATGATTCATGAGAGCAGATATGTTAAGTTCTTGCTTTGGTTTGTAGGAGGATTGGGGGCGTTCGAAGTTTTATGCATATTTGTGATTTGTTTTTTTCTGGTGAGAACAAGGGAGAGAAAATATTCTGGTGTGGATAGACGAGTCTATCATTTGGCCATGACTGGTTTCAGAAAGTTCAGTTATTCTGAACTGAAACAAGCCACGAAAGGGTTCCGTGAGGAGATAGGAAGGGGTGCAGGAGGGGTTGTATTCAAAGGTGTGTTGTTGGATCAACGAGTTGCAGCTGTGAAGAGACTGAAGGATGCGAATCAAGGAGAAGAAGATTTCCTGGCAGAAGTAAGCAGCATTGGAAGGCTTAACCATATGAACTTGATTGAGATGTGGGGGTATTGTGCTGAGGGAAAACACAGACTCTTGGTGTATGAGTACATGGAGCAAGGGTCTCTAGCAGAAAATATGGAGTCAGATGAACTGGACTGGACCAAAAGGTTTAACATAGCACTAGGTACGGCAAGAGGGTTGGCTTATGTTCACGAGGAGTGCTTGGAGTGGATTCTACACTGTGATGTAAAGCCCCAAAACATTCTTCTAGATTCTAACTATCATCCAAAGGTAGCGGATTTTGGGCTGTCAAAGCTGCGAAACAGAAATGATACTAGTAGTACATACTCTAGTTTTTCACGGATACGAGGAACAAGAGGTTACATGGCTCCTGAGTGGGTTTTGAACCAACGAATCACGTCCAAAGTTGACGTTTATAGCTATGGAATTGTTGTTCTGGAAATGGTGACCGGAAAGAGTGCAACAAAGGATGTTGATTACACTGATAATGAAGTGGAGAAAGAGCATCTCAGCATGGTGGCGTGGCTTAAAGATAAACAGAAAAATGGATGCAGTTGGGTTGGTGAAATATTGAAACCCAATGTAAAAGGAGTTTATGAGGAAGATAAGATCGAAGCTTTGGTGAGAGCGGCTCTGCAATGCGTTGAAGAAGAAAAGGAGAAGAGACCCACAATGAGTCAAGTAGTAGAAATGCTTCTCAAATGTAGACGCGAAGATGATAATCTGCATCATCTCTCATAACTTATGGTATCCCATGGCCAGTTTACACAGAAACTAAGTCATTTGAACAAGGTGATCAAGCTTGTTCGTGGACAGGAAAATTATGTTTTAAGAACTATAAATAGGCCAATCTCTTTCCAAAAAGAAAAGTAAAATAAAAGAATGTGATTGTATAAATTGATTAGATACTTAATATATCATTACAATTGTCCATAACTTGTTTCAATCTTAATCATCATAAAAATTATTGTAAAAATAAGGTTTTCACTGTTTTTCTATAACTACAATTATATAATAGAAACAATTCCAATTTTTCATCATGCCTAATTTCATACATCAATAAAGTTTGTTAAGTTTATCAAACATACAAAGAGTAAAATTTGCTTATAGAAACTATTTCCTTTCTATAATTATAACTAAGTTTTAGAAAAAGATTTAGTTTAATGTAATAAATATGGATATATTATTGTAAAAGTTGTTAAAATATCAGTAAAAAAAGTAATGGAGGATTTTATCTTCCACATGCGCTTTTAAAGTTGTTTTTCACTTAACCTGACAGCCATGCATCCACTTCCACAATCTGCTACCATCCCTTTGCATTAAAGCCATGCAGAACGACGACGTACCTCCGTTAGATCAGGCTTTTTGCACCGATTTCCTCAGCTCAATGCCCACCTTTAACAACAACACTAACGAGCTCCAGCGAGCCAAACTCCATGCCCTGCGTCTAGAGAACCTTCTTCGCGATCTCCGACCAAGAGACCACCACCAAATTCCACATCACTACTTCCATGTCCCTCAAGAACTCCATGCAACTTTCATTCTCGGCCCTGGCCAAAAGCTCAACATTCATGTCACTGCAGGAGGCTTTCTTCTGTTACGCCATCGGAAGCTCCGTTCCCACCTCCACCTCCCTCGCATACCATTTAGTGTCTTTGGTGCATGA