Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10819 LG2 48786687 48790716 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/T 48786863 missense_variant p.Pro646His
G/A 48786864 missense_variant p.Pro646Ser
C/T 48786872 missense_variant p.Arg643Lys
C/A 48787543 upstream_gene_variant
A/G 48787682 upstream_gene_variant
A/G 48787719 upstream_gene_variant
C/G 48787733 upstream_gene_variant
T/A 48787904 missense_variant p.His417Leu
T/A 48787910 missense_variant p.His415Leu
T/G 48787982 upstream_gene_variant
T/C 48788027 synonymous_variant p.Ser406Ser
C/G 48788066 upstream_gene_variant
A/T 48788067 upstream_gene_variant
A/T 48788068 upstream_gene_variant
T/A 48788182 missense_variant p.Met385Leu
G/A 48788210 synonymous_variant p.Tyr375Tyr
A/T 48788464 upstream_gene_variant
G/A 48788552 upstream_gene_variant
C/T 48788763 upstream_gene_variant
A/G 48788794 upstream_gene_variant
A/C 48788795 upstream_gene_variant
A/T 48788796 upstream_gene_variant
T/C 48788800 upstream_gene_variant
A/T 48788801 upstream_gene_variant
T/A 48789037 missense_variant p.Ser256Cys
G/A 48789078 missense_variant p.Thr242Ile
T/G 48789144 missense_variant p.Gln220Pro
C/T 48789231 missense_variant p.Arg191His
T/G 48789375 missense_variant p.Gln143Pro
A/C 48789583 upstream_gene_variant
A/T 48789802 missense_variant p.Phe45Ile
A/G 48789902 synonymous_variant p.Asp11Asp
T/A 48789940 5_prime_UTR_premature_start_codon_gain_variant
G/T 48789947 5_prime_UTR_variant
G/T 48790056 5_prime_UTR_variant
C/T 48790140 5_prime_UTR_variant
C/G 48790210 5_prime_UTR_variant
C/T 48790290 5_prime_UTR_variant
T/A 48790362 5_prime_UTR_variant
G/A 48790533 5_prime_UTR_variant
A/G 48790625 5_prime_UTR_variant
A/T 48790634 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10819.1
MKGMDESNTDDGSNHNWLGFSLSPHMNMEVTSAATIPNPTVPTTFYMSSPHISSSGICYGVGGNGNFHSPLTVMPIKSDGSLCILEALNRSQSQVMAPNSTPKLEDFLGGATMGTHEYGSHERGANAMALSLDSIYYSTQNAQAQPNRVTLSESFRQQGHMNVQTHPYYSGLGCHGMYQAQMEDEATKEARASVCSSLMPQMTEDSLKNWMASREYSTHQQVLEQEMNCGMGNEGSGMSLGTVGCGELQSLSLSMSPGSQSSCVTAPSGPDSVAVDAKKRGHVKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVQLEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKDNDPRNEARECTMKNNNKSVMTSESQEEIVEGRNSNENNPEWKMVLFNQASQQQQSNGSEEKIMNCGNYRNSAFSGALQDLIGIDSVEECSKIGTHFSNASSLVTSLSSSREASPEKTGPSLLFPKPSMETKLLNPISTSVTSWLPSPTVQMRPPPAISLSHLPVFAAWTDT*


CDS Sequence:
>Vu_10819.1
ATGAAGGGCATGGACGAGAGTAACACCGATGATGGAAGCAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAACATGGAGGTTACTTCAGCTGCCACTATTCCCAACCCCACTGTTCCGACAACGTTCTACATGTCCTCCCCTCACATTTCCAGCTCAGGAATCTGTTACGGTGTCGGGGGAAATGGTAACTTCCATTCTCCTCTTACCGTTATGCCTATCAAGTCAGATGGGTCACTTTGTATCTTGGAAGCTCTCAATAGATCACAATCGCAAGTGATGGCACCGAATTCTACGCCTAAATTGGAGGACTTTCTTGGTGGTGCAACTATGGGAACTCACGAATATGGGAGCCACGAGAGAGGGGCAAATGCAATGGCTCTGAGTCTAGACAGCATCTACTATAGCACCCAAAATGCTCAGGCACAACCCAACAGAGTCACTCTCTCAGAATCCTTCAGGCAACAGGGGCATATGAACGTCCAAACGCACCCTTATTACTCAGGACTTGGTTGCCACGGGATGTATCAAGCACAGATGGAGGATGAAGCAACGAAGGAAGCTCGCGCATCAGTTTGCAGCTCCCTAATGCCTCAAATGACAGAAGATAGTTTGAAAAACTGGATGGCTTCAAGGGAATATTCAACTCATCAGCAGGTTTTGGAGCAGGAAATGAACTGTGGAATGGGGAATGAAGGAAGTGGCATGTCTCTTGGAACTGTGGGGTGTGGCGAGTTACAGTCACTGAGTTTATCGATGAGTCCTGGTTCTCAGTCTAGTTGTGTCACTGCACCTTCTGGGCCTGATTCTGTGGCTGTGGATGCAAAGAAGAGAGGGCATGTAAAGTTGGGTCAAAAGCAACCAGTGCACAGGAAATCTATTGACACATTTGGGCAGAGAACCTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGGTATGAAGCGCATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACTAGGAAAGGAAGACAAGTATATTTGGGGGGTTACGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTCGCGGCTCTTAAGTACTGGGGACCTTCCACGCATATAAATTTTTCGATTGAAAATTACCATGTTCAACTCGAAGAAATGAAGAGCATGAGCAGGCAGGAATACGTTGCACATTTACGAAGAAAAAGCAGTGGATTTTCAAGGGGTGCTTCAATATACCGAGGGGTCACAAGGCACCACCAACACGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCTGGGAACAAGGACCTATACCTTGGGACATTCAGCACACAGGAGGAAGCAGCAGAAGCATACGATGTAGCCGCAATCAAATTTCGCGGCGCAAATGCAGTCACGAACTTTGACATTTCAAGATACGATGTGGAGAGAATCATGGCGAGTATTAATCTTCTCGCAGGTGAGCTAGCAAGGAGAAATAAAGATAATGATCCAAGAAACGAGGCGAGGGAGTGCACTATGAAAAACAATAACAAGAGTGTGATGACAAGTGAGAGCCAGGAGGAAATAGTCGAAGGTAGAAACAGCAATGAAAACAATCCAGAGTGGAAAATGGTTTTGTTTAATCAAGCTTCACAGCAGCAACAGTCAAATGGCAGTGAGGAAAAAATAATGAACTGCGGAAATTATAGAAACAGTGCATTCTCTGGGGCCCTACAAGATCTCATTGGGATTGATTCGGTGGAGGAGTGTAGCAAAATTGGGACTCATTTTTCAAACGCGTCCTCGCTGGTGACCAGTTTAAGCAGCTCAAGAGAGGCTAGTCCTGAGAAAACGGGTCCCTCGCTTCTGTTTCCAAAGCCCTCCATGGAAACAAAGTTATTGAACCCCATTAGTACTAGTGTTACATCTTGGTTACCCTCACCAACGGTTCAAATGAGACCACCTCCTGCTATTTCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGACTGATACTTAA


Promoter Sequence:
>Vu_10819::LG2:48790716-48792716(-)
TAGGCATACCTCTGCAGCCTCCACCAGGCGACCATCGTCCTTATACAAAATGTCGCAATGTGTGAGAGCATGAGCATTTTGAGGATCCAGCTTGATAGCCTCAAAAAATCTCTCAAACGCAAGCCTTCCCTTATTTTGCATCTGAAGGCATATCCCTTTCCCAATGAGCGCCTCCACATTTGCACCATCGCTCTCTAAGACACGCTCGTAGATAGCAAGAGCGTCAGCAAATTTGTTCCTCGAACGCAAGACGTTCGCATAAGAAACACTGTCGTTCCCTTCACTACCAGCAGAACCACTACACTCCAAAAACCCATTGTTACCATTTCCCGCTAATTCTCGTTCACTCCCGCTCCCATCGCTATTCTCCGCCCCTGCCATCTGCAGAAACAAAACAAGTAACGGAATTTGAAATTGCAGCGACTGCGTCAACAAATTGCACAATCACCATTGTGAGTCTATAGAAAAATACTCAGAATTCATCAACACAAAATCGATCGCAACTGAAGGTGAAAGGACGAACCCTAAACATGGAGGATGGATTCAGATCTACATGGTGTTGTAGAAGCTGACAATAATAGAATAAATCGAGAGTGATGAGTTGATGGGAACTAATCCAGATCGTCTACGGTGGGAAAGATGGGAACTTTTTTCATAAGGATTAGTTTAGATTTGGCGTCCAGTTTTATGGTTTTAGTTATTTAGATTTCGAGGAGAGTGGTGAGTTGATGCCTATCAAGAGGTTGTCGTGGACGGCGACGCTAGCGCATTCCTGGCCACGGTGCTGCTGGAGGACGAGGGGGCAGAGACAAGAAGCTTCTGGTTGGCCGCAGATGACGAAGTTAGATTCAACCTGAAAAACGAAACCATCAACGTGGCACGACAGCTGACATATGACGTGGCTTCGCCGTTTGCCACGTCTACTAAAACTTAACGCCGTCCATTTTGAAGGAGTAATACTAATAGTTTCAAAACTACGAGGATTAAAAACCATCAAAGTTTCGAGTAGGGACTAAAACCAAAATCGTGTGATACTTAAGGGACGAAAAACATATTTAACCCTCTTAAAAATAATATATATCCTCACATTTGATAGATTCTTTTTAAGTATATAAGTAAATTTTTATTCAGAGGAAGGAATGAGAAAGATAGTATTCTTTTAAAAATGCTATAGTACATCTTTTAAATATTTATTTTCTGTAGAATAATATATTAATGGTAACATTTTTTTCTCCAATATTTTCTACAAAAGTAATAATTAAATATTTATCGTCCTTTGTTTTTTTTTTCTTTATCACAAAACAAGTCTGGTTTTTAAATTTTAAACTTTATCGTGAGAGGAATGATTAAGTTAATAAACAAGGATAGTAATTAAATATTTTGCAATCTGTTTGGATAAATTTGAAACATCAAAAGGGAAAGTAAGGTATAGTAAGGCATGGAGTTGTGAAATATATTTAATCTGGTTTTGTGAAGTAAGAGAGTTAAAGAGAAGTTGATGTAAAGATTGTATGTATAGTAAAGTAAGAATGGAAATGTGTTTGTTTGTGAGTAGTTGTGGGAATTTTGACATTGAGAAGTGTGGAAGGAAGAAAGCAGCTAAGGATAATTTAGATTGGGTGGCATAGTGAGCAGAAAGAGGTCAGATGAAATGACCCACCAAATAAACCTCTCTTTGTCCATATCCACAGTGGGCGATGGGTTGTTACCCATTCACCCTCTCACTCAAACACTGCATCACTAATCTGTCCTTTTTCTTTCATTATTATTTATTCAAAGCTTTCCACCCAACCAAAAAGAAAAAAAAAAAAATTAAAACCAAACTGCTGCAGTTTTTCTTTACTAAAATAAAACAATTTTTGAGATTAGAGTTATTGTACTGTGTGAAGTGACTGCATGGGCAGATAGGTCCTTCCTGTCAAATCTATCTCTAGCTACGTTGTCTGTCACAGTAAAAGTTAAATTGGTAAATAAAAGGGTTTTGCTGTGAGTTTTTGGTT


Gene Sequence:
>Vu_10819(-)
ATCCATGTTCTGAATCCTCAATTCTGAATCCTTTCCCATTTCACACTTCCCAGCCCACTCTACTGCCCATTTCATGTCATGCTCACTAGATTCAGCTACATAGCTACCTCCTTACACGCTTTCAAGTTTCCAACGCTCTTACACACAGACACGCTCAGAACCTCACCAAAATAGTTATATCTTCCTCACATTTACATTTCCACCTCTTTCCTTTTTCCCTTCACTATTCTCGAGAATCTCCCTGTTGCATTATCTTCCGCCCTCGTTCTGGGTTTAAGATAGGGTTTAACCAGGAAGTAATATAGTAACTCGTAGAAACTAGAAAGAGTTTTTAAGAAATTACGAAAAGAGAAAAAAGAAGAGAGAGATAGAGTTCTTGTGTGGAGGCAAACCAAAAACTCGGTCTTTCTCATTGATATTTACACAGATCCCTATGGAATGAAGTGGGTGCTCCCCAATCTTCGCTTGCCGAGAATTCATTCCTTTTGCTTAGTTTAAAGAGACCAGTTTTGTTCCCTTCGTGAGAGAGACATATTTTTGGTGAGCTCGCATACAAGGATGAGTTCGGTTGGTAGAGGAGAAAATTACTTTGCATAGTTGTAGCAAAACAACTAAACAACAGCCAAGTTTTCTTATTCAGCAGAGGAAGCAAGAGTGTTTCTTCGTTCAACACCATCATTATTTTATTTGCCAAGCAATGATTGCCTTGCATTCCTTCTTCACAGTGTAGCGACTCCAAACCTTTTCGGGTGACTAAAAAGAAAGAAAACAAAAGCAGGAAGATGAAGGGCATGGACGAGAGTAACACCGATGATGGAAGCAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAACATGGAGGTTACTTCAGCTGCCACTATTCCCAACCCCACTGTTCCGACAACGTTCTACATGTCCTCCCCTCACATTTCCAGCTCAGGAATCTGTTACGGTGTCGGGGGAAATGGTAACTTCCATTCTCCTCTTACCGTTATGCCTATCAAGTCAGATGGGTCACTTTGTATCTTGGAAGCTCTCAATAGATCACAATCGCAAGGTTGGCTTTCGTTTTCATTTTTATTTGTTTTTTTATTTCTCCATAAGATAGTATTCTGTGAAGTTATTTTATTTTTGTCATGTATGTTTCTTTTATAACTACTACCCTGTGACTTTGGTTGCATTATTGAAGTGATGGCACCGAATTCTACGCCTAAATTGGAGGACTTTCTTGGTGGTGCAACTATGGGAACTCACGAATATGGGAGCCACGAGAGAGGGGCAAATGCAATGGCTCTGAGTCTAGACAGCATCTACTATAGCACCCAAAATGCTCAGGCACAACCCAACAGAGTCACTCTCTCAGAATCCTTCAGGCAACAGGGGCATATGAACGTCCAAACGCACCCTTATTACTCAGGACTTGGTTGCCACGGGATGTATCAAGCACAGATGGAGGATGAAGCAACGAAGGAAGCTCGCGCATCAGTTTGCAGCTCCCTAATGCCTCAAATGACAGAAGATAGTTTGAAAAACTGGATGGCTTCAAGGGAATATTCAACTCATCAGCAGGTTTTGGAGCAGGAAATGAACTGTGGAATGGGGAATGAAGGAAGTGGCATGTCTCTTGGAACTGTGGGGTGTGGCGAGTTACAGTCACTGAGTTTATCGATGAGTCCTGGTTCTCAGTCTAGTTGTGTCACTGCACCTTCTGGGCCTGATTCTGTGGCTGTGGATGCAAAGAAGAGAGGGCATGTAAAGTTGGGTCAAAAGCAACCAGTGCACAGGAAATCTATTGACACATTTGGGCAGAGAACCTCTCAGTATAGAGGTGTCACAAGGTCAGTTTTGAATCTTTCTTCATTTGTGTAATTTCTTACTGAAGTTGTTTTCTTTGTCTAGTCTATTATTATTGTTTATAATAAATATTGTTTATTGAATCCCTTTGGTTGTTTTCCAATAGGCATAGATGGACTGGTAGGTATGAAGCGCATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACTAGGAAAGGAAGACAAGGTTAGTGAGAAATAAAGAATGGTAGTGGTTGACATTTTTATTATTTTTTTGGAAGTATTCTTCTCCATTAAAGATTTTTGGTCCCTAATCTGACATGTGCCCACTAACTTGTGCAATGTTTTGATCTTTGTCTCTCCTGACGATTAAATCGAATTTTGCATGTTGCAGTATATTTGGGTAACTCCTCATCCTCACTTAAATTTTTTCCTTTTTAACACTCTTGCTACTGTTTCTAATTTTTACGTGGTCAAATTTGGTTTTGATCTTAGGGGGTTACGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTCGCGGCTCTTAAGTACTGGGGACCTTCCACGCATATAAATTTTTCGGTATATTTCGTTTTTTGAAACTGTTCTTGCTTCATTCGAATCTTTTGTTCCTTCGAATCACACTCTCTTTTGGTTCGCTTTGGCAGATTGAAAATTACCATGTTCAACTCGAAGAAATGAAGAGCATGAGCAGGCAGGAATACGTTGCACATTTACGAAGGTACACATCGAATAATTAACAATTATGTGGGCAAAAGCTACCAATTATTATGTGATAATCATGATGACAGAATATTTATTTGCTTTGCAGAAAAAGCAGTGGATTTTCAAGGGGTGCTTCAATATACCGAGGGGTCACAAGGTTCGTGTGGTTCTCTTGAACCCCACCCTCCTTTTTATTATTTCTGTTTGGAAAAATCAAGTTAAGTTTTCATCTTTTTTGTGTTACGCAGGCACCACCAACACGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCTGGGAACAAGGACCTATACCTTGGGACATTCAGTAAGTCCTAAATTACTGTCAATTCCTAATTAAAATGGGTGTGTGAGATTAACATTTGTATTAGATACAATTAATGCTAAATTACTGTCAGTAAGTCTTTTATTTGATATATATTGCAATCTCTCTTTTCCCAAACACCAGTGACTATTAGTGCTTTTATAAGGCTGACCATACCGCAACTTTGAATGCAACGTGCCACCTTTTTTTTAAGGCTGTTACTCTCGGTGATAAAATATGATAGAGAGGATAAAGGGTATCTTCACAAGAATACGTTTTAAGGAAAGCTGAAATTTTTGAAGTGCCCTTTTCATTTAAAAAGTTTTTAATTAAATGGGTGTTTATTTTTTCCTTCAGGCACACAGGAGGAAGCAGCAGAAGCATACGATGTAGCCGCAATCAAATTTCGCGGCGCAAATGCAGTCACGAACTTTGACATTTCAAGATACGATGTGGAGAGAATCATGGCGAGTATTAATCTTCTCGCAGGTGAGCTAGCAAGGAGAAATAAAGATAATGATCCAAGAAACGAGGCGAGGGAGTGCACTATGAAAAACAATAACAAGAGTGTGATGACAAGTGAGAGCCAGGAGGAAATAGTCGAAGGTAGAAACAGCAATGAAAACAATCCAGAGTGGAAAATGGTTTTGTTTAATCAAGCTTCACAGCAGCAACAGTCAAATGGCAGTGAGGAAAAAATAATGAACTGCGGAAATTATAGAAACAGTGCATTCTCTGGGGCCCTACAAGATCTCATTGGGATTGATTCGGTGGAGGAGTGTAGCAAAATTGGGACTCATTTTTCAAACGCGTCCTCGCTGGTGACCAGTTTAAGCAGCTCAAGAGAGGCTAGTCCTGAGAAAACGGGTCCCTCGCTTCTGTTTCCAAAGCCCTCCATGGAAACAAAGTTATTGAACCCCATTAGTACTAGTGTTACATCTTGGTTACCCTCACCAACGGTTCAAATGAGACCACCTCCTGCTATTTCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGACTGATACTTAAGAAAGATAGATCCTTTTCAGTTTTCACATTATGCCCTGTTGCTGGCTAAATCGCACTCTTTCTTTTATCTCATTTTCTCTTTGTTTTATTTGATCATCTAAATTCAGAGTCTTTTTTTTAGACC