Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10711 LG2 47806730 47808569 PREDICTED: serine/threonine-protein kinase At5g01020-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 47807051 missense_variant p.Arg276Gly
G/C 47807160 upstream_gene_variant
T/A 47807525 upstream_gene_variant
A/G 47807533 upstream_gene_variant
A/C 47808015 synonymous_variant p.Leu136Leu
T/A 47808046 upstream_gene_variant
T/C 47808059 upstream_gene_variant
A/G 47808119 upstream_gene_variant
T/C 47808225 synonymous_variant p.Val115Val
A/G 47808226 missense_variant p.Val115Ala
A/C 47808232 missense_variant p.Val113Gly
T/C 47808281 missense_variant p.Lys97Glu
T/C 47808283 missense_variant p.Tyr96Cys
A/T 47808286 missense_variant p.Val95Glu
A/G 47808381 synonymous_variant p.Gly63Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10711.1
MSSKKITWKSIVLILNCYKTQSSLQESEKQVLKQGSFQRLCLSDISIPSSPQAIEDLSISLVGPKLYTFTLEELREATHNFSWSNLLGEGGFGPVYKGFVDDKLRPGLKAQSVAVKQLNLDGFQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMARGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDLGLAKDGPEGEDTHVTTTCIMGTRGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGRRVVDKCRPNRERTLVEWARPLLRDQRKLHHIIDPRLEGQFPRKGALKVAALTYKCLSHHPYPRPAMSDVVKILESLQDFDDVIIGPFVYVAVSESSQ*


CDS Sequence:
>Vu_10711.1
ATGAGTTCTAAAAAGATTACATGGAAGTCTATTGTGTTGATCTTAAACTGTTACAAGACTCAAAGTTCCTTACAGGAATCAGAGAAACAGGTTTTGAAACAAGGTTCTTTCCAAAGGTTATGCCTCTCGGATATAAGCATTCCTAGCTCCCCTCAGGCCATTGAAGATCTTTCCATTTCCCTTGTTGGTCCAAAGCTTTACACATTCACCCTAGAGGAGCTAAGGGAAGCAACACATAATTTCTCATGGAGTAATCTTCTGGGTGAAGGAGGGTTCGGACCTGTGTACAAAGGTTTTGTTGATGACAAACTTAGGCCTGGTTTGAAGGCTCAGTCTGTAGCAGTAAAACAACTGAACTTGGATGGCTTCCAAGGTCACAGGGAGTGGCTGGCGGAGATTATATTTCTTGGACAGCTGAGGCATCCACATCTTGTTAAGTTAATTGGCTACTGTTGTGAGGAGGAGCACAGGCTTCTTGTGTATGAATACATGGCTAGAGGCAGCTTGGAGAATCAACTATTCAGAAGATACTCTGCTGCCTTGCCATGGTCAACCAGGATGAAGATTGCATTGGGTGCAGCTAAGGGTCTGGCCTTCCTTCACGAAGCAGATAAACCTGTAATATACAGAGATTTCAAAACTTCAAACATCTTACTTGACTCGGATTACACGGCTAAATTATCAGATCTTGGGCTAGCAAAAGATGGTCCTGAAGGGGAAGACACACATGTAACGACAACATGCATAATGGGAACCCGAGGCTATGCTGCCCCTGAGTACATCATGTCAGGTCACCTTTCCACCAAGAGTGATGTGTATAGCTATGGAGTCGTTTTGTTGGAATTGCTTACAGGAAGAAGGGTAGTGGATAAGTGCCGACCCAATAGAGAACGAACCCTTGTGGAATGGGCAAGGCCTCTTTTGAGAGATCAAAGAAAGTTGCACCATATAATAGACCCTAGATTAGAAGGGCAGTTTCCTAGGAAAGGAGCTTTGAAGGTTGCTGCATTGACCTATAAATGTTTGAGCCACCACCCCTATCCAAGGCCAGCTATGAGTGATGTGGTTAAGATACTAGAGTCTCTTCAGGATTTTGACGATGTGATCATAGGACCATTTGTGTATGTTGCAGTGAGTGAAAGTAGCCAATGA


Promoter Sequence:
>Vu_10711::LG2:47808569-47810569(-)
TATGGGTTTCGAATAATTCTTTTCAAAAATTCCAATCCAAAAAATTTATTTCAGAACATATTTATATGTTTGAAAATTTTGCTTCAAAAATTATATTTTGAAAATTAAAATGTTGTTTCGGTAGTTTCGAAAAGCTTATTTCAGAAAATTTCCCAAGTATGTAATGTGGAAGTAACTTTTTCAAAAGTAAAATGATTATTTCGAAAGTTTGAGGAGTCCTGTTATGACGGGTAGATAGATGGCTAGATCTGGAAGAGAAGAAAAATCACATAAAATCCTAGAAAAAGGGTTGAAGAGAATCTGTAAATTTGTATCCCTTAATTCTTACGCGGCCATTGAAAAAATGATTAGAAATTTCACATTGTTCTGGTAGAGACACAGAAGCCAGTTTTGATTTTAGAGTGTCATCACATGTTCCTGTTCCAAGCATGGAACTGAACTCTTCTTGCACTTGTTGCGGGAAAACTATGAAACACCAGAATCAAACAGACAAATGACATCTACCCAACACTTACTAGCAATTACATTGCAGTTTGCCACACCGTGACATTAAGTTATTAACTTGCATCAGTCAGGAATACAAGTCTTACATTAAATAAAAATAAGAAAAATCAAGAATTCATGCAAAGTTTAGTAGGATTTAAGGTAACATGAACTTTTATTCTGCAGAAGTTGAGTCTGTGGAATGAAACAACGTTGGTTTTAACTTTTTAACTTACCTACTACAATCCCTGATACAACTCATTACCCTGATAATGACCTCCACAATGTTCAGTATCTGAAGTTTAACATGTACCGGAACTCTGGCTGTTGGCTTGAGTGTTTTCAAAGCTAATTTATCTTTCATACTGAACACAAGTTTACACAATTAAAGTATATATATATATATATATATAACTTTTTCCCCTTTCTTATTTTGGTCATACTTATGGTCTTTAAGCACTTGGAAAGGGCAATTCAATTGTCAAAGAATGATGCAACGATTAGCATAATAAGTTGTGTAGAGTTTTGGCAATTTTCCACTGGGGATAGAAGTGGTTAATGGTTAGATTGATTGGTTCACCCTTTCTCTTTGACCTTTGTGAAGGCTACCTATCCTTTTGTTTTTATTTTGGTATATTTTTCCCTTTCGACAATTTTAAAATATCTCAAGCCTTTTGAAGTTTTTCGTCGTTATTTCTGAAACTGAGGCCTAGACCAAGGAGATGTATTTGATGGATTTATTAGGATTCTATGAATACTAAATTCTTAGTATCCTCGGTCAGGAAGCTATCCTTGATTACCACATTAAAAATTGCAAAGGAGAGTCTATTGTCGGGCTGCCATGTCTGAAGTTGACATGTTAACAACAACAATAGAGAAAAGTGTGACCTACCAGAAACTGGGAAATGTATCAATTGAATAAACAAAGAAAACCGTCTAATGTGCTAAAAGATTCGATAATATGGAATTGTTGGTTTTGCACCTGGCAAATTATGTCAAATTGTAAGACCTTCACTGGAATGCTCATCAACAGCTATACAAAAATAAGTGTACGACTAAATGGCTATGGAGACAAAATAGAGATTGGATACATGTTTGTAAGGGGTTGGAGAAGTGTTGGGTAACATTGAAGTCTATAGGTAGTCGAGTTTCTTGACATCTAATCAATTGAAAATAGGACAACAATTATAATTATGTCATAAAAATATTGTAACAGCAAATAAAATAAAAGTCATTCATGCATGTAGTATTACTCTGCCAAGGGGCAATATGGCATGGCATCCCAATTCAGAAAGAGGTCTAGAAGTCAAGGAATCTTTCTATGTTTTTTTTTTTTCTAAGGGTAGTTAGGACTTGGGAGAATGTATGTGCTACAAACTTCTCACCCTTCATATATTTTTTTAATATTATCAGTTAAGTCATTTTCTATGTTGTCTTTATAATTCCCTAGGCTTAAGAGCAAAGGAAGTGGTTTTGTTCAGAGTATTGCACATACATACACATACTGGTTTTTCTAA


Gene Sequence:
>Vu_10711(-)
ATGAGTTCTAAAAAGATTACATGGAAGTCTATTGTGTTGATCTTAAACTGTTACAAGACTCAAAGTTCCTTACAGGAATCAGAGAAACAGGTTTTGAAACAAGGTTCTTTCCAAAGGTTATGCCTCTCGGATATAAGCATTCCTAGCTCCCCTCAGGCCATTGAAGATCTTTCCATTTCCCTTGTTGGTCCAAAGCTTTACACATTCACCCTAGAGGAGCTAAGGGAAGCAACACATAATTTCTCATGGAGTAATCTTCTGGGTGAAGGAGGGTTCGGACCTGTGTACAAAGGTTTTGTTGATGACAAACTTAGGCCTGGTTTGAAGGCTCAGTCTGTAGCAGTAAAACAACTGAACTTGGATGGCTTCCAAGGTCACAGGGAGTGGCTGGTTAGTCTGTTTGCATTTTTTGCTTCAACCCATTCTAATATAGTCGTAAATCAATTTAAATATACTAGTCCAATGAATAAAATCTAGCTAATGAAACATGGTTGAAGAATATCTGACACTAGCTTGGCACATAATTTTCTTCTATAGGCGGAGATTATATTTCTTGGACAGCTGAGGCATCCACATCTTGTTAAGTTAATTGGCTACTGTTGTGAGGAGGAGCACAGGCTTCTTGTGTATGAATACATGGCTAGAGGCAGCTTGGAGAATCAACTATTCAGAAGTATGTAATGATGTTTTTCTTTATTCTACCTATTTTTCTCTTTCTTATCCCCATCAAGGAAGGAGCGTAATCAAGTACAAAGTCCCTGGGTTATTCTGTGTGAGTATTCTGATTGATTCAGTGGTATATATAAACTAAGCCTAAGTTTTGTTCTAATTCAAGCAGGATACTCTGCTGCCTTGCCATGGTCAACCAGGATGAAGATTGCATTGGGTGCAGCTAAGGGTCTGGCCTTCCTTCACGAAGCAGATAAACCTGTAATATACAGAGATTTCAAAACTTCAAACATCTTACTTGACTCGGTATGTTCAATATCTTTTCTGACGGATGATAAGATATCTTCTAATGGCCTACATCATCTTCTTGTATGCAACAAGAAGTTTTTACAGTATATATGATTGTTTATTTTATGTTACATTTTAATGTTGATACGCTGTCTAACTAATCAGAAATCTTTCTAGAACTTCAAAAATTTATTGTAAAAGATTGTATGAAAAATCATGATTAAAAGACAAACTCTTTATTTTATCTTTACAAATCCAGGATTACACGGCTAAATTATCAGATCTTGGGCTAGCAAAAGATGGTCCTGAAGGGGAAGACACACATGTAACGACAACATGCATAATGGGAACCCGAGGCTATGCTGCCCCTGAGTACATCATGTCAGGTATACATAAGATGTCATTAACTTTGCCTTTTGTGGTAACTTGATTAATTTCAAAGGCTCAAAGATCTTTCAAACTCAGTGATTTTTGTTTTTGTTTCTCAAGAATCGCATGATTAATTCATTGCCTGACCCCAGGTCACCTTTCCACCAAGAGTGATGTGTATAGCTATGGAGTCGTTTTGTTGGAATTGCTTACAGGAAGAAGGGTAGTGGATAAGTGCCGACCCAATAGAGAACGAACCCTTGTGGAATGGGCAAGGCCTCTTTTGAGAGATCAAAGAAAGTTGCACCATATAATAGACCCTAGATTAGAAGGGCAGTTTCCTAGGAAAGGAGCTTTGAAGGTTGCTGCATTGACCTATAAATGTTTGAGCCACCACCCCTATCCAAGGCCAGCTATGAGTGATGTGGTTAAGATACTAGAGTCTCTTCAGGATTTTGACGATGTGATCATAGGACCATTTGTGTATGTTGCAGTGAGTGAAAGTAGCCAATGA