Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10494 LG2 45530485 45532822 PREDICTED: pollen receptor-like kinase 4
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   phosphorylation, root hair elongation, developmental growth involved in morphogenesis, protein phosphorylation, response to light stimulus, developmental cell growth, root hair elongation, root morphogenesis, developmental cell growth, phosphorylation, organelle organization, cell wall organization or biogenesis, cell tip growth, negative regulation of metabolic process, developmental growth involved in morphogenesis, cell tip growth, root hair elongation, cell morphogenesis involved in differentiation, root hair elongation, root morphogenesis, plant epidermis development, developmental cell growth, root hair elongation, root hair elongation, protein phosphorylation, protein phosphorylation, cell tip growth, developmental cell growth, cell morphogenesis involved in differentiation, cell morphogenesis involved in differentiation, developmental cell growth
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, protein binding, protein binding, kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein binding
SNP Position Effect Amino acid change
G/A 45531305 upstream_gene_variant
G/T 45532482 synonymous_variant p.Gly511Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10494.1
MLFTCFLPSLADNAQVLIHFKTFLSNADALSNWGNQSIGVCSWTGVLCFNQSFHGLRLEHMGLGGTVDVDTLLLLSNLNSFSVINNNFEGPMPELKKLVNLRALFLSNNKFSGEIPDDAFDGMNRLKRVFLAENEFTGHIPTSLAQLPKLFDVDIHGNSFEGNIPEFQQSDFRVFNLSYNKLEGPIPESLSGKDPTSFAGNPGLCGDPLGPCIGSPTPPSDTDQPPNSHTEKENKKKRIILTVVVVVGVIVLASIIALLIIRYRRKKPVLVKDAQPQNVTPFSSESKSIVVTAESKKSEDGGLNFVGNQREGIDLQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNGVGKKEFFDHMSRLGKLSHPNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGVELNWATRLKIIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDGSFEARLAEYGLVAVVEKSHAQQFMVAYKSPEASQSEKPSEKSDVWCLGILILELLTGKFPASYLRHGKGANEDLAAWVNSIVSEGWNAEVLDKEIPGRGSGEGEMVKLLRIGMGCCEWSLESRWGWKEAVAKIEELKESDDGGEGGSELDHLYSVSTSLDDFSLSQSIS*


CDS Sequence:
>Vu_10494.1
ATGCTCTTCACTTGTTTTTTGCCTTCACTCGCTGACAATGCTCAAGTTCTGATCCACTTCAAAACATTCTTGTCCAATGCTGATGCTTTAAGCAACTGGGGGAACCAATCAATCGGTGTGTGCAGCTGGACTGGTGTACTGTGTTTCAATCAGAGTTTTCATGGCTTGAGATTAGAACACATGGGACTGGGTGGCACTGTTGACGTAGACACGCTGCTTCTGTTGTCCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTCGAGGGTCCAATGCCCGAATTGAAGAAGCTTGTCAATTTAAGGGCGTTGTTTCTGAGCAATAATAAGTTTTCTGGTGAAATCCCAGATGATGCTTTTGATGGCATGAATCGTCTCAAGAGAGTATTCTTGGCTGAAAATGAGTTCACTGGTCATATTCCTACGTCCTTGGCTCAATTGCCTAAACTTTTTGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGAGTGATTTCAGAGTGTTTAATCTGTCTTACAACAAATTAGAGGGTCCAATTCCAGAAAGCTTAAGCGGCAAGGATCCAACTTCGTTTGCTGGTAATCCAGGTCTATGCGGAGATCCTCTAGGCCCCTGCATTGGAAGCCCCACCCCACCATCGGACACTGATCAACCGCCAAATTCACATACAGAAAAAGAAAACAAGAAAAAACGCATTATCCTAACAGTTGTTGTAGTGGTGGGGGTGATTGTGCTGGCTTCAATAATAGCACTCTTGATCATCCGTTACCGTCGAAAGAAACCCGTGCTGGTCAAAGATGCACAACCCCAGAACGTTACTCCATTTTCTAGCGAGTCCAAATCCATTGTTGTGACAGCTGAATCCAAGAAAAGTGAAGACGGAGGGTTGAACTTCGTCGGGAACCAGAGGGAGGGGATTGACTTGCAAGACCTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGCTTTGGATCCACTTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACGGCGTGGGGAAGAAAGAGTTTTTTGACCACATGAGCAGGCTCGGAAAATTGTCACACCCCAATCTACTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAGAAGCTTTTGGTTCATGACTTTGCTGAAAATGGCAGCTTGGCCAGTCATCTTCACGGAAGAAGCGGAGTTGAATTGAACTGGGCAACTCGTTTGAAGATCATAAAAGGAGTGGCGAGGGGATTGGCTTATCTGTACACGGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTGAAATCGTCAAACGTTGTACTGGACGGTTCCTTCGAGGCTCGTTTGGCAGAGTACGGACTTGTGGCAGTGGTGGAGAAGAGCCACGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCAGAGGCGAGCCAGTCTGAGAAGCCAAGCGAGAAGAGCGATGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAGTTATCTGAGGCATGGGAAGGGAGCGAATGAGGATTTGGCGGCGTGGGTGAACTCCATAGTGAGCGAAGGGTGGAATGCGGAGGTGCTTGATAAGGAGATTCCTGGGAGAGGGAGTGGAGAGGGTGAGATGGTGAAGCTGTTAAGGATTGGAATGGGATGCTGTGAATGGAGCTTGGAGAGTAGATGGGGTTGGAAGGAAGCTGTGGCAAAGATTGAGGAGTTGAAGGAGAGTGACGATGGTGGTGAAGGTGGAAGTGAACTGGATCATCTCTACTCAGTTTCTACCAGTCTCGATGACTTCTCTCTCTCACAGTCTATTTCATGA


Promoter Sequence:
>Vu_10494::LG2:45528485-45530485(+)
AGAAAATGAATAACTAAAGTGTACACATTTTTTGTTTGGTACCTTGGGAAGAAACGGGAGAGGGTGAAGAAGGCGAAAATGGCGAGGGCTGATTGTGGTAGTTGGAGGAGCTTGTTGAAGCTAAAGGGGTCGAGTTGCGAAGCCGGGATGTGAACAAAGAGAGAAGTGAAGAGAGGGACAGTGATGGTGAGGAACACGAAGACAACATAGGAAACGAGTTTTGTGAGGAAGGAAGAGTGGTCGAGAGCACAACATTGAAGGGTTGTGCGTAGGTTTTGCAGTTCGTGGGTGGCATAAGATGGTTGTCGGAGGAGCAAGGGAATGTTGAGTTGTTGGTGTTTTTCCACGAATGATGGGCTTCTGATGGAGGAACCAATGTCGATGATGATTGTGTTGTTTGATTCTGTGGAGGGCTTCATCGTTGGGTTTCTTTTGAGTAATATGAGACACAGAAACAGAGCAAAGAAAAGTGAAGAAACAGAGCGATGGGTTTTTGAGGGTGTTCTTTACTTACTGTTAATGGAGAAAAATAGAAAGGAAAAAGACAGTAAATATCTTAGTTTAGAGTTTTAAAGAAACTTAATTGAATTATATAGTAAATTGTTTAAAAAAAGTGGCTGTTAAAAACCATTTTGCTAACTAAATATGATTTACAAAGGAATAAAGAAAGAAAAGTATAAACCTTACTTTGCGTTGTGAGAATTCTTCAGGTTACATGTTAAGCTAGGAATAATGAACGTTTCATTTAATAATAAATAAAGTCTTTATTTAAATTTAACCATAATAAAATTACACACATATATATATAATAGTATATTAGTATTTAGTTGTTGTCATGCTAGTCTTCAACTGATCATTGTCTACCTGTCAATTTATTTTGCTTTCTTTTTTTTATTGATTGTGACAACAATTTAACTTTCATTATTAAATTCATTTGTGATCAAATCACTTTTTTATATATAAGCAAACAACAATAAACATAATCACAATACTAATATTATTAAAACAAATCCTTCGAATCTCTTACACACACGACACGTTGTTTCAAATTATTTTTCTCTTCAACACTTCAATAATCCATTTTTATTTTTATTTTTATTTTTTACATAACCATGGTTATTTTGAGTATTTGTTCTATTGGGATTTATGGTAATGTACAGGTGTTTTTTTTTTAATTTTTTCAAAACCTTTTTTAAGATTTTAAGTGAGTATTAGATAAGAATAAATTGGAGATGAGTCTTTGAATTGGAAGTAGTGTCTTGACATGAACACATAAGTGATCAAATCCTGATTAAATCATTGTATTAATCCCACATAGGATATCAATGAATCTGAAGAACAATATTTTAGAAAAATACACATAAAAATTATTAAATGAAATGCTCACAGTTAATTGGTGTAGAGTTTTTTTAATAGAAAAAAACCCAACAACCTCGATGAAGAAATTCATAAGAATAAATCGAATCAAATACGCACGGATTTATTTTATTAAATATATATCATAGGTAACAAAAAAATTAAAGAACTTAACTCTCAAAAAAAACATAATAAAATAAAATAAGAAAATATGAGTAATTTGAATCTCTTTGCATGTAGTGTAACAAATTCCTATCATAACAAACACACCAGACAAATAGAAGTCACGTAAAATTGTTGTTATGCATATTTTAGAGACGACCAATGTGATAGAAGGCATCACCTTCTCCAATAACAAGAAATGACAGCTTTTAACCAGGCCACAACCAGCATTATAAATAACCATTGAACAAAAGTATCTTTGGAAATGAAGTCCAAACACTTACATTATACATAGGCCGGCCTCACCAGCTCATTCTTTGTGGGAACGATCTTGTCCTTGTCAATGTCACCCCACAAAATGCTTAACATTTCTCATATCCCTTCATCTTCTTTATCCTTTTTCTCCTGCTTCTAAACTCGCCAACAAAAACTTTTTCTCCAAGTTCTTATGGCGCATATGGTAGAGTGCTTCTGTCTTCTCA


Gene Sequence:
>Vu_10494(+)
ATGCTCTTCACTTGTTTTTTGCCTTCACTCGCTGACAATGCTCAAGTTCTGATCCACTTCAAAACATTCTTGTCCAATGCTGATGCTTTAAGCAACTGGGGGAACCAATCAATCGGTGTGTGCAGCTGGACTGGTGTACTGTGTTTCAATCAGAGTTTTCATGGCTTGAGATTAGAACACATGGGACTGGGTGGCACTGTTGACGTAGACACGCTGCTTCTGTTGTCCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTCGAGGGTCCAATGCCCGAATTGAAGAAGCTTGTCAATTTAAGGGCGTTGTTTCTGAGCAATAATAAGTTTTCTGGTGAAATCCCAGATGATGCTTTTGATGGCATGAATCGTCTCAAGAGAGTATTCTTGGCTGAAAATGAGTTCACTGGTCATATTCCTACGTCCTTGGCTCAATTGCCTAAACTTTTTGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGAGTGATTTCAGAGTGTTTAATCTGTCTTACAACAAATTAGAGGGTCCAATTCCAGAAAGCTTAAGCGGCAAGGATCCAACTTCGTTTGCTGGTAAGTTGACAGCCATCTATGCTCTCTCTCTTTATAGTTTCTACCAATGGAGATTATCTACTTTACTATTTGTTCTCTTTCGTTGTTTGTTGCCGTTTATTTTAGCCTTATTTGGAACATTCGATGACATGTTCACATCAGTGTTAAATGTCGGAATCTTAATCAAGGAAATTTAATTATGGCAACGACTATCTGAAGAAAACTCTTCAGCATTTGAACACAGAATTGAATACAACCGTCCATGATAATGAATTCATGGTCAGCTCCAAGTGTACATTCACCACAGATAGCTTTTACACTAAGGTGCATTATGCTGCTTGAAATTGAATTTTCTGATCTAATTTTTCTAGTGAAACAGGTAATCCAGGTCTATGCGGAGATCCTCTAGGCCCCTGCATTGGAAGCCCCACCCCACCATCGGACACTGATCAACCGCCAAATTCACATACAGAAAAAGAAAACAAGAAAAAACGCATTATCCTAACAGTTGTTGTAGTGGTGGGGGTGATTGTGCTGGCTTCAATAATAGCACTCTTGATCATCCGTTACCGTCGAAAGAAACCCGTGCTGGTCAAAGATGCACAACCCCAGAACGTTACTCCATTTTCTAGCGAGTCCAAATCCATTGTTGTGACAGCTGAATCCAAGAAAAGTGAAGACGGAGGGTTGAACTTCGTCGGGAACCAGAGGGAGGGGATTGACTTGCAAGACCTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGCTTTGGATCCACTTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACGGCGTGGGGAAGAAAGAGTTTTTTGACCACATGAGCAGGCTCGGAAAATTGTCACACCCCAATCTACTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAGAAGCTTTTGGTTCATGACTTTGCTGAAAATGGCAGCTTGGCCAGTCATCTTCACGGTATGACCCATTCGTTATTTTACTCTTAAAAATCTGAACTTTAGATTCAGTTCCTTAAAATATCCCATACCCATTTGAGTAATGTTGTCTGTAATTGATTTGTAGGAAGAAGCGGAGTTGAATTGAACTGGGCAACTCGTTTGAAGATCATAAAAGGAGTGGCGAGGGGATTGGCTTATCTGTACACGGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTGAAATCGTCAAACGTTGTACTGGACGGTTCCTTCGAGGCTCGTTTGGCAGAGTACGGACTTGTGGCAGTGGTGGAGAAGAGCCACGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCAGAGGCGAGCCAGTCTGAGAAGCCAAGCGAGAAGAGCGATGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAGTTATCTGAGGCATGGGAAGGGAGCGAATGAGGATTTGGCGGCGTGGGTGAACTCCATAGTGAGCGAAGGGTGGAATGCGGAGGTGCTTGATAAGGAGATTCCTGGGAGAGGGAGTGGAGAGGGTGAGATGGTGAAGCTGTTAAGGATTGGAATGGGATGCTGTGAATGGAGCTTGGAGAGTAGATGGGGTTGGAAGGAAGCTGTGGCAAAGATTGAGGAGTTGAAGGAGAGTGACGATGGTGGTGAAGGTGGAAGTGAACTGGATCATCTCTACTCAGTTTCTACCAGTCTCGATGACTTCTCTCTCTCACAGTCTATTTCATGA